RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 TOMM6Q96B49 74 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 DPH3Q96FX2 82 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 LYZL4Q96KX0 146 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 C20orf78Q9BR46 151 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 SDF2L1Q9HCN8 221 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 BCL2L10Q9HD36 194 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 C21orf62Q9NYP8 219 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 PTPRDP23468 1912 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 HIVEP3Q5T1R4 2406 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 APCP25054 2843 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 TRBV20-1A0A075B6N2 111 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 IGHV3-72A0A0B4J1Y9 119 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 IZUMO1RA6ND01 250 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 M0R2P5 195 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 ZNF737O75373 536 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 CAV3P56539 151 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 FUT5Q11128 374 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 IGFBP7Q16270 282 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 RRN3P1Q2M238 152 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 GUSBP11Q6P575 273 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 BAGE3Q86Y29 109 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 BAGE2Q86Y30 109 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 DCANP1Q8TF63 244 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 RNASE6Q93091 150 aaKnown RBP4.81□□□□□ -1.64
SMCO1-201ENST00000397537 PRELID3AQ96N28 172 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 AKAP9Q99996 3911 aa4.8□□□□□ -1.64
SMCO1-201ENST00000397537 C3orf85A0A1B0GTC6 90 aa4.8□□□□□ -1.64
SMCO1-201ENST00000397537 IGLL5B9A064 214 aa4.8□□□□□ -1.64
SMCO1-201ENST00000397537 ZNF73O43830 326 aaPredicted RBP4.8□□□□□ -1.64
SMCO1-201ENST00000397537 SERF1AO75920 110 aa4.8□□□□□ -1.64
SMCO1-201ENST00000397537 PRH1P02810 166 aa4.8□□□□□ -1.64
SMCO1-201ENST00000397537 TAS2R45P59539 299 aa4.8□□□□□ -1.64
SMCO1-201ENST00000397537 NR2C2APQ86WQ0 139 aa4.8□□□□□ -1.64
SMCO1-201ENST00000397537 BPIFA4PQ86YQ2 179 aa4.8□□□□□ -1.64
SMCO1-201ENST00000397537 OR5C1Q8NGR4 320 aa4.8□□□□□ -1.64
SMCO1-201ENST00000397537 AMELYQ99218 206 aa4.8□□□□□ -1.64
SMCO1-201ENST00000397537 ZNF835Q9Y2P0 537 aa4.8□□□□□ -1.64
SMCO1-201ENST00000397537 SCN8AQ9UQD0 1980 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 CEP192Q8TEP8 1941 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 FSHBP01225 129 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 ZNF688P0C7X2 276 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 ZNF80P51504 273 aaPredicted RBP4.79□□□□□ -1.64
SMCO1-201ENST00000397537 ETDBQ3ZM63 59 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 SPRNQ5BIV9 151 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 TMEM136Q6ZRR5 245 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 TMEM204Q9BSN7 226 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 ZNF286AQ9HBT8 521 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 C8orf17Q9NRJ1 99 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 ZNF580Q9UK33 172 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 MYLKQ15746 1914 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 FBN1P35555 2871 aaKnown RBP4.79□□□□□ -1.64
SMCO1-201ENST00000397537 FN1P02751 2386 aaKnown RBP4.79□□□□□ -1.64
SMCO1-201ENST00000397537 IGLV7-46A0A075B6I9 117 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 ZNF736B4DX44 427 aaPredicted RBP4.79□□□□□ -1.64
SMCO1-201ENST00000397537 LYZL6O75951 148 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 C3orf79P0CE67 100 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 ZNF883P0CG24 379 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 SMIM13P0DJ93 91 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 CRYGAP11844 174 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 CRYGSP22914 178 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 RPP25LQ8N5L8 163 aaKnown RBP4.79□□□□□ -1.64
SMCO1-201ENST00000397537 C20orf203Q8NBC4 194 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 H1FXQ92522 213 aaKnown RBP4.79□□□□□ -1.64
SMCO1-201ENST00000397537 C2orf50Q96LR7 162 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 CAMK2N2Q96S95 79 aa4.79□□□□□ -1.64
SMCO1-201ENST00000397537 TRAV27A0A087WT01 109 aa4.78□□□□□ -1.64
SMCO1-201ENST00000397537 TRAV1-2A0A0B4J238 106 aa4.78□□□□□ -1.64
SMCO1-201ENST00000397537 A0A0J9YW62 118 aa4.78□□□□□ -1.64
SMCO1-201ENST00000397537 INS-IGF2F8WCM5 200 aa4.78□□□□□ -1.64
SMCO1-201ENST00000397537 IGHV3-11P01762 117 aa4.78□□□□□ -1.64
SMCO1-201ENST00000397537 APOC2P02655 101 aa4.78□□□□□ -1.64
SMCO1-201ENST00000397537 CXCL5P42830 114 aa4.78□□□□□ -1.64
SMCO1-201ENST00000397537 BSPH1Q075Z2 132 aa4.78□□□□□ -1.64
SMCO1-201ENST00000397537 Q56UQ5 140 aa4.78□□□□□ -1.64
SMCO1-201ENST00000397537 RPL7L1Q6DKI1 246 aaKnown RBP4.78□□□□□ -1.64
SMCO1-201ENST00000397537 C9orf47Q6ZRZ4 202 aa4.78□□□□□ -1.64
SMCO1-201ENST00000397537 CYP2G1PQ6ZSU1 146 aa4.78□□□□□ -1.64
SMCO1-201ENST00000397537 LCA10Q71F78 164 aa4.78□□□□□ -1.64
SMCO1-201ENST00000397537 SPATA12Q7Z6I5 190 aa4.78□□□□□ -1.64
SMCO1-201ENST00000397537 LSM10Q969L4 123 aaKnown RBP4.78□□□□□ -1.64
SMCO1-201ENST00000397537 KIAA1549LQ6ZVL6 1849 aa4.78□□□□□ -1.64
SMCO1-201ENST00000397537 ATRQ13535 2644 aa4.77□□□□□ -1.65
SMCO1-201ENST00000397537 IGHV1OR15-9A0A0B4J2B8 117 aa4.77□□□□□ -1.65
SMCO1-201ENST00000397537 ZNF324O75467 553 aaPredicted RBP4.77□□□□□ -1.65
SMCO1-201ENST00000397537 IGKV1-5P01602 117 aa4.77□□□□□ -1.65
SMCO1-201ENST00000397537 TRACP01848 142 aa4.77□□□□□ -1.65
SMCO1-201ENST00000397537 ZNF136P52737 540 aa4.77□□□□□ -1.65
SMCO1-201ENST00000397537 CMC4P56277 68 aaPredicted RBP4.77□□□□□ -1.65
SMCO1-201ENST00000397537 FGF12P61328 243 aa4.77□□□□□ -1.65
SMCO1-201ENST00000397537 WFDC2Q14508 124 aa4.77□□□□□ -1.65
SMCO1-201ENST00000397537 APCDD1LQ8NCL9 501 aa4.77□□□□□ -1.65
SMCO1-201ENST00000397537 OR10G2Q8NGC3 310 aa4.77□□□□□ -1.65
SMCO1-201ENST00000397537 STAG3L4Q8TBR4 150 aa4.77□□□□□ -1.65
SMCO1-201ENST00000397537 COPS9Q8WXC6 57 aa4.77□□□□□ -1.65
SMCO1-201ENST00000397537 SCRT2Q9NQ03 307 aa4.77□□□□□ -1.65
SMCO1-201ENST00000397537 MYO16Q9Y6X6 1858 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 CD3DP04234 171 aa4.76□□□□□ -1.65
SMCO1-201ENST00000397537 MDKP21741 143 aaPredicted RBP4.76□□□□□ -1.65
SMCO1-201ENST00000397537 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms