RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 ASCL5Q7RTU5 278 aa13.29□□□□□ -0.28
TRAF3IP1-202ENST00000391993 PRAC2D3DTV9 90 aa13.29□□□□□ -0.28
TRAF3IP1-202ENST00000391993 C1orf162Q8NEQ5 155 aaPredicted RBP13.29□□□□□ -0.28
TRAF3IP1-202ENST00000391993 PTPRQQ9UMZ3 2332 aa13.29□□□□□ -0.28
TRAF3IP1-202ENST00000391993 TAL2Q16559 108 aa13.29□□□□□ -0.28
TRAF3IP1-202ENST00000391993 PTPRBP23467 1997 aa13.29□□□□□ -0.28
TRAF3IP1-202ENST00000391993 LGALS1P09382 135 aaKnown RBP13.28□□□□□ -0.28
TRAF3IP1-202ENST00000391993 TMEM30BQ3MIR4 351 aa13.28□□□□□ -0.28
TRAF3IP1-202ENST00000391993 LYPD1Q8N2G4 141 aa13.28□□□□□ -0.28
TRAF3IP1-202ENST00000391993 ZNF625Q96I27 306 aaPredicted RBP13.28□□□□□ -0.28
TRAF3IP1-202ENST00000391993 H3BRN7 92 aa13.28□□□□□ -0.28
TRAF3IP1-202ENST00000391993 TEX36Q5VZQ5 186 aa13.28□□□□□ -0.28
TRAF3IP1-202ENST00000391993 SMIM2Q9BVW6 85 aa13.28□□□□□ -0.28
TRAF3IP1-202ENST00000391993 IGHV3-11P01762 117 aa13.28□□□□□ -0.28
TRAF3IP1-202ENST00000391993 DPM3Q9P2X0 92 aa13.28□□□□□ -0.28
TRAF3IP1-202ENST00000391993 TRAV4A0A0B4J268 109 aa13.27□□□□□ -0.29
TRAF3IP1-202ENST00000391993 MYCNOSP40205 109 aa13.27□□□□□ -0.29
TRAF3IP1-202ENST00000391993 DEFB1P60022 68 aa13.27□□□□□ -0.29
TRAF3IP1-202ENST00000391993 H3BMM0 161 aa13.27□□□□□ -0.29
TRAF3IP1-202ENST00000391993 C15orf32Q32M92 178 aa13.27□□□□□ -0.29
TRAF3IP1-202ENST00000391993 MDS2Q8NDY4 140 aa13.27□□□□□ -0.29
TRAF3IP1-202ENST00000391993 UBE2WQ96B02 151 aa13.27□□□□□ -0.29
TRAF3IP1-202ENST00000391993 DUX3Q96PT4 197 aa13.27□□□□□ -0.29
TRAF3IP1-202ENST00000391993 A4D1N5 150 aa13.26□□□□□ -0.29
TRAF3IP1-202ENST00000391993 PMVKQ15126 192 aa13.26□□□□□ -0.29
TRAF3IP1-202ENST00000391993 NFE4Q86UQ8 179 aa13.26□□□□□ -0.29
TRAF3IP1-202ENST00000391993 NCKAP5O14513 1909 aa13.26□□□□□ -0.29
TRAF3IP1-202ENST00000391993 RNASE1P07998 156 aaKnown RBP13.26□□□□□ -0.29
TRAF3IP1-202ENST00000391993 NDUFV3P56181 108 aaKnown RBP13.26□□□□□ -0.29
TRAF3IP1-202ENST00000391993 ATXN8Q156A1 80 aa13.26□□□□□ -0.29
TRAF3IP1-202ENST00000391993 LINC00477Q96M19 166 aa13.26□□□□□ -0.29
TRAF3IP1-202ENST00000391993 TMEM14CQ9P0S9 112 aa13.26□□□□□ -0.29
TRAF3IP1-202ENST00000391993 TECTAO75443 2155 aa13.26□□□□□ -0.29
TRAF3IP1-202ENST00000391993 IGLV2-11P01706 119 aa13.25□□□□□ -0.29
TRAF3IP1-202ENST00000391993 IGHV3-73A0A0B4J1V6 119 aa13.25□□□□□ -0.29
TRAF3IP1-202ENST00000391993 DUSP14O95147 198 aaKnown RBP13.25□□□□□ -0.29
TRAF3IP1-202ENST00000391993 FOXC1Q12948 553 aa13.25□□□□□ -0.29
TRAF3IP1-202ENST00000391993 HHLA3Q9XRX5 114 aa13.25□□□□□ -0.29
TRAF3IP1-202ENST00000391993 EXPH5Q8NEV8 1989 aa13.25□□□□□ -0.29
TRAF3IP1-202ENST00000391993 TEX49A0A1B0GTD5 131 aa13.24□□□□□ -0.29
TRAF3IP1-202ENST00000391993 CD7P09564 240 aa13.24□□□□□ -0.29
TRAF3IP1-202ENST00000391993 RNASE13Q5GAN3 156 aaKnown RBP13.24□□□□□ -0.29
TRAF3IP1-202ENST00000391993 DEFB124Q8NES8 71 aa13.24□□□□□ -0.29
TRAF3IP1-202ENST00000391993 LRP4O75096 1905 aa13.24□□□□□ -0.29
TRAF3IP1-202ENST00000391993 K7EM74 188 aa13.24□□□□□ -0.29
TRAF3IP1-202ENST00000391993 CHCHD5Q9BSY4 110 aa13.24□□□□□ -0.29
TRAF3IP1-202ENST00000391993 WI2-2373I1.2A0A1W2PRP0 233 aa13.24□□□□□ -0.29
TRAF3IP1-202ENST00000391993 TMEM178BH3BS89 294 aa13.23□□□□□ -0.29
TRAF3IP1-202ENST00000391993 LINC01548A6NM66 108 aa13.23□□□□□ -0.29
TRAF3IP1-202ENST00000391993 M0R2P5 195 aa13.23□□□□□ -0.29
TRAF3IP1-202ENST00000391993 RPL32P62910 135 aaKnown RBP13.23□□□□□ -0.29
TRAF3IP1-202ENST00000391993 ADAMTS20P59510 1910 aa13.23□□□□□ -0.29
TRAF3IP1-202ENST00000391993 PRSS33Q8NF86 280 aa13.23□□□□□ -0.29
TRAF3IP1-202ENST00000391993 BUB1B-PAK6H3BSN5 160 aa13.23□□□□□ -0.29
TRAF3IP1-202ENST00000391993 RPL39P62891 51 aaKnown RBP13.23□□□□□ -0.29
TRAF3IP1-202ENST00000391993 WDFY3Q8IZQ1 3526 aa13.22□□□□□ -0.29
TRAF3IP1-202ENST00000391993 IGKV3OR2-268A0A0C4DH90 116 aa13.22□□□□□ -0.29
TRAF3IP1-202ENST00000391993 CD3EP07766 207 aa13.22□□□□□ -0.29
TRAF3IP1-202ENST00000391993 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
TRAF3IP1-202ENST00000391993 AGPAT4-IT1Q9H0P7 198 aa13.22□□□□□ -0.29
TRAF3IP1-202ENST00000391993 CFAP126Q5VTH2 177 aa13.22□□□□□ -0.29
TRAF3IP1-202ENST00000391993 K7EIM0 57 aa13.21□□□□□ -0.29
TRAF3IP1-202ENST00000391993 FCN3O75636 299 aa13.21□□□□□ -0.29
TRAF3IP1-202ENST00000391993 CFC1BP0CG36 223 aa13.21□□□□□ -0.29
TRAF3IP1-202ENST00000391993 CFC1P0CG37 223 aa13.21□□□□□ -0.29
TRAF3IP1-202ENST00000391993 CGB3P0DN86 165 aa13.21□□□□□ -0.29
TRAF3IP1-202ENST00000391993 CGB7P0DN87 165 aa13.21□□□□□ -0.29
TRAF3IP1-202ENST00000391993 LINC01559Q495D7 138 aa13.21□□□□□ -0.29
TRAF3IP1-202ENST00000391993 ZNF493Q6ZR52 646 aa13.21□□□□□ -0.29
TRAF3IP1-202ENST00000391993 DPH3P1Q9H4G8 78 aa13.21□□□□□ -0.29
TRAF3IP1-202ENST00000391993 J3QQQ9 107 aa13.21□□□□□ -0.29
TRAF3IP1-202ENST00000391993 LOXP28300 417 aaPredicted RBP13.21□□□□□ -0.29
TRAF3IP1-202ENST00000391993 PDE6HQ13956 83 aa13.21□□□□□ -0.29
TRAF3IP1-202ENST00000391993 CR1LQ2VPA4 569 aa13.21□□□□□ -0.3
TRAF3IP1-202ENST00000391993 LINC01560Q8TB33 94 aa13.21□□□□□ -0.3
TRAF3IP1-202ENST00000391993 REV3LO60673 3130 aa13.21□□□□□ -0.3
TRAF3IP1-202ENST00000391993 IGLV3-9A0A075B6K5 115 aa13.2□□□□□ -0.3
TRAF3IP1-202ENST00000391993 IGLV2-23P01705 113 aa13.2□□□□□ -0.3
TRAF3IP1-202ENST00000391993 Q6ZQT7 251 aa13.2□□□□□ -0.3
TRAF3IP1-202ENST00000391993 COLQQ9Y215 455 aaPredicted RBP13.2□□□□□ -0.3
TRAF3IP1-202ENST00000391993 FAM236AA0A1B0GUQ0 79 aa13.2□□□□□ -0.3
TRAF3IP1-202ENST00000391993 FAM236BA0A1B0GV22 79 aa13.2□□□□□ -0.3
TRAF3IP1-202ENST00000391993 C11orf86A6NJI1 115 aa13.2□□□□□ -0.3
TRAF3IP1-202ENST00000391993 PF4V1P10720 104 aa13.2□□□□□ -0.3
TRAF3IP1-202ENST00000391993 PAPPA-AS1Q5QFB9 102 aa13.2□□□□□ -0.3
TRAF3IP1-202ENST00000391993 FAM57AQ8TBR7 257 aa13.2□□□□□ -0.3
TRAF3IP1-202ENST00000391993 CTSZQ9UBR2 303 aa13.2□□□□□ -0.3
TRAF3IP1-202ENST00000391993 C5orf64Q2M2E5 130 aa13.19□□□□□ -0.3
TRAF3IP1-202ENST00000391993 RNASE6Q93091 150 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP1-202ENST00000391993 DUX5Q96PT3 197 aa13.19□□□□□ -0.3
TRAF3IP1-202ENST00000391993 YAE1D1Q9NRH1 226 aa13.19□□□□□ -0.3
TRAF3IP1-202ENST00000391993 I3L2K1 104 aa13.19□□□□□ -0.3
TRAF3IP1-202ENST00000391993 NDUFA11Q86Y39 141 aa13.19□□□□□ -0.3
TRAF3IP1-202ENST00000391993 CEP295Q9C0D2 2601 aa13.19□□□□□ -0.3
TRAF3IP1-202ENST00000391993 RBAKDNA6NC62 111 aa13.19□□□□□ -0.3
TRAF3IP1-202ENST00000391993 F6UB75 175 aa13.19□□□□□ -0.3
TRAF3IP1-202ENST00000391993 Q8N1Y9 231 aa13.19□□□□□ -0.3
TRAF3IP1-202ENST00000391993 CARD19Q96LW7 228 aa13.19□□□□□ -0.3
TRAF3IP1-202ENST00000391993 CDIP1Q9H305 208 aa13.19□□□□□ -0.3
TRAF3IP1-202ENST00000391993 KHDC1LQ5JSQ8 128 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms