RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 FREM3P0C091 2139 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 SEC11BP0C7V7 166 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 HLA-DRB4P13762 266 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 CRISP2P16562 243 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 SNCAP37840 140 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 NMUP48645 174 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 GNB2P62879 340 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 PRR4Q16378 134 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 Q6ZUT4 128 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 PHF5AQ7RTV0 110 aaKnown RBP2.56□□□□□ -2
ECHDC1-205ENST00000368295 RNF182Q8N6D2 247 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 ZNF555Q8NEP9 628 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 OR4B1Q8NGF8 309 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 OR4X2Q8NGF9 303 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 OR4A5Q8NH83 315 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 HDHD3Q9BSH5 251 aaPredicted RBP2.56□□□□□ -2
ECHDC1-205ENST00000368295 FGFBP2Q9BYJ0 223 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 TAC3Q9UHF0 121 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 RNF11Q9Y3C5 154 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 F11RQ9Y624 299 aaKnown RBP2.56□□□□□ -2
ECHDC1-205ENST00000368295 HLA-DRB4X5D2U9 266 aa2.56□□□□□ -2
ECHDC1-205ENST00000368295 TRBV27A0A0K0K1C4 114 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 IFITM10A6NMD0 228 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 HRASP01112 189 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 CRYGAP11844 174 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 HIST1H2BOP23527 126 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 COX7A1P24310 79 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 HIST1H2BBP33778 126 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 HIST1H2BDP58876 126 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 HIST1H2BCP62807 126 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 CCL20P78556 96 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 HIST2H2BEQ16778 126 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.55□□□□□ -2
ECHDC1-205ENST00000368295 ZNF329Q86UD4 541 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 NFE4Q86UQ8 179 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 TEN1Q86WV5 123 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 TMEM61Q8N0U2 210 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 STPG4Q8N801 248 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 NUP37Q8NFH4 326 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 OR5H2Q8NGV7 314 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 C10orf105Q8TEF2 133 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 C10orf82Q8WW14 230 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 HIST1H2BHQ93079 126 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 FAM104AQ969W3 186 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 MRPS24Q96EL2 167 aaKnown RBP2.55□□□□□ -2
ECHDC1-205ENST00000368295 C1orf147Q96MC9 270 aaPredicted RBP2.55□□□□□ -2
ECHDC1-205ENST00000368295 SMIM14Q96QK8 99 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 HIST1H2BNQ99877 126 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 HIST1H2BMQ99879 126 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 AGPAT4-IT1Q9H0P7 198 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 CA10Q9NS85 328 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 TMEM106BQ9NUM4 274 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 ZNF492Q9P255 531 aa2.55□□□□□ -2
ECHDC1-205ENST00000368295 ZNF706Q9Y5V0 76 aaPredicted RBP2.55□□□□□ -2
ECHDC1-205ENST00000368295 DOCK7Q96N67 2140 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 HUWE1Q7Z6Z7 4374 aaKnown RBP2.54□□□□□ -2
ECHDC1-205ENST00000368295 A0A087WW49 117 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 H3BQ15 152 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 APOC4-APOC2K7ER74 178 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 APOC2P02655 101 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 CD7P09564 240 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 SLC25A16P16260 332 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 DAPP51397 102 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 SP6Q3SY56 376 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 TMEM155Q4W5P6 130 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 KHDC3LQ587J8 217 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 C9orf153Q5TBE3 101 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 LINC00311Q8N616 119 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 OR5C1Q8NGR4 320 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 OR1J4Q8NGS1 313 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 ATP6V0E2Q8NHE4 81 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 OTOSQ8NHW6 89 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 DCANP1Q8TF63 244 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 POP5Q969H6 163 aaKnown RBP2.54□□□□□ -2
ECHDC1-205ENST00000368295 RMI2Q96E14 147 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 B9D2Q9BPU9 175 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 TSSK6Q9BXA6 273 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 ZNF286AQ9HBT8 521 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 UQCR10Q9UDW1 63 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 LINC00312Q9Y6C7 94 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 EXPH5Q8NEV8 1989 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 IGHV3OR16-10A0A075B7F0 116 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 ZNF860A6NHJ4 632 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 PLA2G10O15496 165 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 IGKV1-5P01602 117 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 CHTF8P0CG12 524 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 S100A4P26447 101 aaKnown RBP2.54□□□□□ -2
ECHDC1-205ENST00000368295 ZNF80P51504 273 aaPredicted RBP2.54□□□□□ -2
ECHDC1-205ENST00000368295 YPEL3P61236 119 aaPredicted RBP2.54□□□□□ -2
ECHDC1-205ENST00000368295 UBE2BP63146 152 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 HBBP68871 147 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 CXCL6P80162 114 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 AKR1C1Q04828 323 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 Q0VG73 95 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 RSPO1Q2MKA7 263 aaPredicted RBP2.54□□□□□ -2
ECHDC1-205ENST00000368295 SCXQ7RTU7 201 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 MARCH3Q86UD3 253 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 SLC25A42Q86VD7 318 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 OR8A1Q8NGG7 326 aa2.54□□□□□ -2
ECHDC1-205ENST00000368295 ZNF431Q8TF32 576 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms