RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-204ENST00000368292 FAM182AQ5T1J6 154 aa3.71□□□□□ -1.82
ECHDC1-204ENST00000368292 HEPN1Q6WQI6 88 aa3.71□□□□□ -1.82
ECHDC1-204ENST00000368292 SLC25A26Q70HW3 274 aa3.71□□□□□ -1.82
ECHDC1-204ENST00000368292 DCANP1Q8TF63 244 aa3.71□□□□□ -1.82
ECHDC1-204ENST00000368292 HIST1H2BHQ93079 126 aa3.71□□□□□ -1.82
ECHDC1-204ENST00000368292 POP5Q969H6 163 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-204ENST00000368292 C11orf52Q96A22 123 aa3.71□□□□□ -1.82
ECHDC1-204ENST00000368292 NABP1Q96AH0 204 aa3.71□□□□□ -1.82
ECHDC1-204ENST00000368292 HIST1H2BNQ99877 126 aa3.71□□□□□ -1.82
ECHDC1-204ENST00000368292 HIST1H2BMQ99879 126 aa3.71□□□□□ -1.82
ECHDC1-204ENST00000368292 TMEM243Q9BU79 118 aa3.71□□□□□ -1.82
ECHDC1-204ENST00000368292 SLC25A15Q9Y619 301 aa3.71□□□□□ -1.82
ECHDC1-204ENST00000368292 ALPK2Q86TB3 2170 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 IGKV1-27A0A075B6S5 117 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 NDUFC2-KCTD14E9PQ53 114 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 F8W1H4 67 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 FAM72CH0Y354 149 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 K7N7A8 449 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 M0R1X1 148 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 M0R2P5 195 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 M0R378 163 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 PIN1P1O15428 100 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 UBL3O95164 117 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 TRACP01848 142 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 ZNF705DP0CH99 300 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 AQP1P29972 269 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 POLR2IP36954 125 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 SYNJ2BPP57105 145 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 FAM72AQ5TYM5 149 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 OR2T2Q6IF00 324 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 FAM72DQ6L9T8 149 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 GTSCR1Q86UQ5 136 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 FAM72BQ86X60 149 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 ZNF584Q8IVC4 421 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 OR10P1Q8NGE3 313 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 TMEM190Q8WZ59 177 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 IMMP1LQ96LU5 166 aa3.7□□□□□ -1.82
ECHDC1-204ENST00000368292 DNAH9Q9NYC9 4486 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 TRBV20-1A0A075B6N2 111 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 A0A087WW49 117 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 ZNF705FA8MVS1 300 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 OOSP1A8MZH6 123 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 NDUFB6O95139 128 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 NDUFB2O95178 105 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 PRB2P02812 416 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 ZNF705BP0CI00 300 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 HLA-DRB4P13762 266 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 ZNF136P52737 540 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 YPEL3P61236 119 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 SNRPFP62306 86 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 EBI3Q14213 229 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 KIAA0087Q14695 138 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 ADIRFQ15847 76 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 LGALSLQ3ZCW2 172 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 LINC01545Q5VT33 79 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 EBLN2Q6P2I7 272 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 C10orf111Q8N326 155 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 OR5C1Q8NGR4 320 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 MAL2Q969L2 176 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 SLC25A22Q9H936 323 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 ZNF702PQ9H963 129 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 ZNF706Q9Y5V0 76 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 HLA-DRB4X5D2U9 266 aa3.69□□□□□ -1.82
ECHDC1-204ENST00000368292 FREM3P0C091 2139 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 PRR14LQ5THK1 2151 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 TRBV27A0A0K0K1C4 114 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 PINLYPA6NC86 204 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 ZNF860A6NHJ4 632 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 K7EQD1 137 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 PITX3O75364 302 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 SNCGO76070 127 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 GYPAP02724 150 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 SHBGP04278 402 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 CXCL1P09341 107 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 SLC25A6P12236 298 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 IGHV1-2P23083 117 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 ASIPP42127 132 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 RPS10P46783 165 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 HINT1P49773 126 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 TAS2R45P59539 299 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 KRTAP10-6P60371 365 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 GNB1P62873 340 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 LGALS9BQ3B8N2 356 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 GFI1BQ5VTD9 330 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 TEN1Q86WV5 123 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 BPIFA4PQ86YQ2 179 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 H1FXQ92522 213 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 S100A16Q96FQ6 103 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 TIMM17AQ99595 171 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 HDHD3Q9BSH5 251 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 C16orf95Q9H693 158 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 SLC39A9Q9NUM3 307 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 OR5V1Q9UGF6 321 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 MOB4Q9Y3A3 225 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 SERP1Q9Y6X1 66 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 UBR4Q5T4S7 5183 aa3.68□□□□□ -1.82
ECHDC1-204ENST00000368292 IGLV3-12A0A075B6K2 115 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 IGHV1OR15-1A0A075B7D0 117 aa3.67□□□□□ -1.82
ECHDC1-204ENST00000368292 TRAV9-2A0A087WT02 112 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms