RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 LGALS9CQ6DKI2 356 aa14.16□□□□□ -0.14
COL18A1-202ENST00000355480 GP9P14770 177 aa14.16□□□□□ -0.14
COL18A1-202ENST00000355480 SPRNQ5BIV9 151 aa14.16□□□□□ -0.14
COL18A1-202ENST00000355480 TRAV13-2A0A0B4J235 113 aa14.15□□□□□ -0.14
COL18A1-202ENST00000355480 LTAP01374 205 aa14.15□□□□□ -0.14
COL18A1-202ENST00000355480 PRR20EP86478 221 aa14.15□□□□□ -0.14
COL18A1-202ENST00000355480 PRR20CP86479 221 aa14.15□□□□□ -0.14
COL18A1-202ENST00000355480 PRR20DP86480 221 aa14.15□□□□□ -0.14
COL18A1-202ENST00000355480 PRR20BP86481 221 aa14.15□□□□□ -0.14
COL18A1-202ENST00000355480 PRR20AP86496 221 aa14.15□□□□□ -0.14
COL18A1-202ENST00000355480 J3QQQ9 107 aa14.15□□□□□ -0.14
COL18A1-202ENST00000355480 CFHR4Q92496 578 aa14.15□□□□□ -0.14
COL18A1-202ENST00000355480 DSCR8Q96T75 97 aa14.15□□□□□ -0.14
COL18A1-202ENST00000355480 COX11Q9Y6N1 276 aa14.15□□□□□ -0.14
COL18A1-202ENST00000355480 IGFL2Q6UWQ7 119 aa14.14□□□□□ -0.15
COL18A1-202ENST00000355480 RLFQ13129 1914 aa14.14□□□□□ -0.15
COL18A1-202ENST00000355480 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.14□□□□□ -0.15
COL18A1-202ENST00000355480 IGKV2-29A2NJV5 120 aaPredicted RBP14.14□□□□□ -0.15
COL18A1-202ENST00000355480 MGAMO43451 1857 aa14.14□□□□□ -0.15
COL18A1-202ENST00000355480 C11orf52Q96A22 123 aa14.13□□□□□ -0.15
COL18A1-202ENST00000355480 ZNF124Q15973 351 aa14.13□□□□□ -0.15
COL18A1-202ENST00000355480 C1orf43Q9BWL3 253 aa14.13□□□□□ -0.15
COL18A1-202ENST00000355480 BLCAPP62952 87 aa14.13□□□□□ -0.15
COL18A1-202ENST00000355480 NRGNQ92686 78 aa14.13□□□□□ -0.15
COL18A1-202ENST00000355480 KLF2Q9Y5W3 355 aaPredicted RBP14.13□□□□□ -0.15
COL18A1-202ENST00000355480 C20orf144Q9BQM9 153 aa14.13□□□□□ -0.15
COL18A1-202ENST00000355480 EGR2P11161 476 aaPredicted RBP14.12□□□□□ -0.15
COL18A1-202ENST00000355480 PLXNA4Q9HCM2 1894 aa14.12□□□□□ -0.15
COL18A1-202ENST00000355480 AJUBAQ96IF1 538 aa14.12□□□□□ -0.15
COL18A1-202ENST00000355480 PRO1854Q9UHT4 67 aa14.12□□□□□ -0.15
COL18A1-202ENST00000355480 IGHV7-81A0A0B4J1V7 117 aa14.11□□□□□ -0.15
COL18A1-202ENST00000355480 CRYGCP07315 174 aa14.11□□□□□ -0.15
COL18A1-202ENST00000355480 RBAKDNA6NC62 111 aa14.11□□□□□ -0.15
COL18A1-202ENST00000355480 ZNF493Q6ZR52 646 aa14.11□□□□□ -0.15
COL18A1-202ENST00000355480 Q6ZWC4 215 aa14.11□□□□□ -0.15
COL18A1-202ENST00000355480 SPRY2O43597 315 aa14.11□□□□□ -0.15
COL18A1-202ENST00000355480 COX8AP10176 69 aa14.1□□□□□ -0.15
COL18A1-202ENST00000355480 WIPF3A6NGB9 483 aa14.1□□□□□ -0.15
COL18A1-202ENST00000355480 C10orf105Q8TEF2 133 aa14.1□□□□□ -0.15
COL18A1-202ENST00000355480 LENEPQ9Y5L5 61 aa14.1□□□□□ -0.15
COL18A1-202ENST00000355480 IGF2-ASQ6U949 168 aa14.1□□□□□ -0.15
COL18A1-202ENST00000355480 NPBQ8NG41 125 aa14.1□□□□□ -0.15
COL18A1-202ENST00000355480 SPART-AS1P0CW21 52 aa14.09□□□□□ -0.15
COL18A1-202ENST00000355480 C16orf74Q96GX8 76 aa14.09□□□□□ -0.15
COL18A1-202ENST00000355480 RPL18AQ02543 176 aaKnown RBP14.09□□□□□ -0.15
COL18A1-202ENST00000355480 MYLKQ15746 1914 aa14.09□□□□□ -0.15
COL18A1-202ENST00000355480 C9orf118A6NHY6 69 aa14.09□□□□□ -0.15
COL18A1-202ENST00000355480 GYPEP15421 78 aa14.09□□□□□ -0.15
COL18A1-202ENST00000355480 ADORA2A-AS1P86434 159 aa14.09□□□□□ -0.15
COL18A1-202ENST00000355480 HEATR5AQ86XA9 2040 aa14.09□□□□□ -0.15
COL18A1-202ENST00000355480 CCL18P55774 89 aa14.08□□□□□ -0.15
COL18A1-202ENST00000355480 BOD1L2Q8IYS8 172 aa14.08□□□□□ -0.15
COL18A1-202ENST00000355480 ICOSQ9Y6W8 199 aa14.08□□□□□ -0.15
COL18A1-202ENST00000355480 TRAV12-1A0A0B4J245 112 aa14.08□□□□□ -0.16
COL18A1-202ENST00000355480 BUB3O43684 328 aa14.08□□□□□ -0.16
COL18A1-202ENST00000355480 DEFB105AQ8NG35 78 aa14.08□□□□□ -0.16
COL18A1-202ENST00000355480 MALRD1Q5VYJ5 2156 aa14.08□□□□□ -0.16
COL18A1-202ENST00000355480 HELZP42694 1942 aaKnown RBP14.08□□□□□ -0.16
COL18A1-202ENST00000355480 TEX48A0A1B0GUV7 120 aa14.08□□□□□ -0.16
COL18A1-202ENST00000355480 ATP5G1P05496 136 aa14.08□□□□□ -0.16
COL18A1-202ENST00000355480 IGLL1P15814 213 aa14.08□□□□□ -0.16
COL18A1-202ENST00000355480 UTF1Q5T230 341 aa14.08□□□□□ -0.16
COL18A1-202ENST00000355480 DKK2Q9UBU2 259 aa14.08□□□□□ -0.16
COL18A1-202ENST00000355480 hADV29S1A0JD25 119 aa14.08□□□□□ -0.16
COL18A1-202ENST00000355480 IGLC2P0DOY2 106 aa14.08□□□□□ -0.16
COL18A1-202ENST00000355480 IGLC3P0DOY3 106 aa14.08□□□□□ -0.16
COL18A1-202ENST00000355480 C5orf38Q86SI9 138 aa14.08□□□□□ -0.16
COL18A1-202ENST00000355480 CEND1Q8N111 149 aa14.08□□□□□ -0.16
COL18A1-202ENST00000355480 WIPF2Q8TF74 440 aaPredicted RBP14.08□□□□□ -0.16
COL18A1-202ENST00000355480 MRPL23Q16540 153 aaKnown RBP14.08□□□□□ -0.16
COL18A1-202ENST00000355480 DOCK9Q9BZ29 2069 aa14.08□□□□□ -0.16
COL18A1-202ENST00000355480 K7EN84 100 aa14.07□□□□□ -0.16
COL18A1-202ENST00000355480 CARD19Q96LW7 228 aa14.07□□□□□ -0.16
COL18A1-202ENST00000355480 TINCRA0A1B0GVN0 87 aa14.07□□□□□ -0.16
COL18A1-202ENST00000355480 IGHG4P01861 327 aa14.07□□□□□ -0.16
COL18A1-202ENST00000355480 Q9H8V8 135 aa14.07□□□□□ -0.16
COL18A1-202ENST00000355480 SLC25A29Q8N8R3 303 aa14.07□□□□□ -0.16
COL18A1-202ENST00000355480 Q8NFD4 153 aa14.06□□□□□ -0.16
COL18A1-202ENST00000355480 PPDPFLQ8WWR9 84 aa14.06□□□□□ -0.16
COL18A1-202ENST00000355480 RITA1Q96K30 269 aa14.06□□□□□ -0.16
COL18A1-202ENST00000355480 ATP6V0E2Q8NHE4 81 aa14.06□□□□□ -0.16
COL18A1-202ENST00000355480 GTF3C1Q12789 2109 aa14.06□□□□□ -0.16
COL18A1-202ENST00000355480 DOCK11Q5JSL3 2073 aa14.06□□□□□ -0.16
COL18A1-202ENST00000355480 IGHV3-30P01768 117 aa14.06□□□□□ -0.16
COL18A1-202ENST00000355480 IGHV3-33P01772 117 aa14.06□□□□□ -0.16
COL18A1-202ENST00000355480 IGHV3-30-3P0DP02 117 aa14.06□□□□□ -0.16
COL18A1-202ENST00000355480 IGHV3-30-5P0DP03 117 aa14.06□□□□□ -0.16
COL18A1-202ENST00000355480 I3L2K1 104 aa14.05□□□□□ -0.16
COL18A1-202ENST00000355480 RNF152Q8N8N0 203 aa14.05□□□□□ -0.16
COL18A1-202ENST00000355480 IGLV10-54A0A075B6I4 117 aa14.05□□□□□ -0.16
COL18A1-202ENST00000355480 NDUFS5O43920 106 aa14.05□□□□□ -0.16
COL18A1-202ENST00000355480 C9orf153Q5TBE3 101 aa14.05□□□□□ -0.16
COL18A1-202ENST00000355480 K7EQD1 137 aa14.05□□□□□ -0.16
COL18A1-202ENST00000355480 CAMK2N2Q96S95 79 aa14.05□□□□□ -0.16
COL18A1-202ENST00000355480 FGF23Q9GZV9 251 aaPredicted RBP14.05□□□□□ -0.16
COL18A1-202ENST00000355480 ESM1Q9NQ30 184 aa14.05□□□□□ -0.16
COL18A1-202ENST00000355480 PKIGQ9Y2B9 76 aa14.04□□□□□ -0.16
COL18A1-202ENST00000355480 IGLV11-55A0A075B6I3 123 aa14.04□□□□□ -0.16
COL18A1-202ENST00000355480 IGHV4OR15-8A0A075B7B6 117 aa14.04□□□□□ -0.16
COL18A1-202ENST00000355480 A0A087WW49 117 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms