RNA–Protein interactions for RNA: ENST00000353546.7

ARFGAP1-201, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARFGAP1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-201ENST00000353546 SH2D1AO60880 128 aa13.08□□□□□ -0.32
ARFGAP1-201ENST00000353546 CD7P09564 240 aa13.08□□□□□ -0.32
ARFGAP1-201ENST00000353546 TMEM78Q5T7P6 136 aa13.08□□□□□ -0.32
ARFGAP1-201ENST00000353546 PLEKHB2Q96CS7 222 aa13.08□□□□□ -0.32
ARFGAP1-201ENST00000353546 ODF3Q96PU9 254 aa13.08□□□□□ -0.32
ARFGAP1-201ENST00000353546 AAMDCQ9H7C9 122 aa13.08□□□□□ -0.32
ARFGAP1-201ENST00000353546 NXT2Q9NPJ8 142 aaKnown RBP13.08□□□□□ -0.32
ARFGAP1-201ENST00000353546 ATRXP46100 2492 aa13.07□□□□□ -0.32
ARFGAP1-201ENST00000353546 AKAP6Q13023 2319 aa13.07□□□□□ -0.32
ARFGAP1-201ENST00000353546 WNK2Q9Y3S1 2297 aa13.07□□□□□ -0.32
ARFGAP1-201ENST00000353546 PRSS33Q8NF86 280 aa13.07□□□□□ -0.32
ARFGAP1-201ENST00000353546 MDFICQ9P1T7 246 aa13.07□□□□□ -0.32
ARFGAP1-201ENST00000353546 SLC25A20O43772 301 aa13.07□□□□□ -0.32
ARFGAP1-201ENST00000353546 EFNA4P52798 201 aa13.07□□□□□ -0.32
ARFGAP1-201ENST00000353546 A0A0G2JNJ9 132 aa13.06□□□□□ -0.32
ARFGAP1-201ENST00000353546 CRYGBP07316 175 aa13.06□□□□□ -0.32
ARFGAP1-201ENST00000353546 SCGB1C2P0DMR2 95 aa13.06□□□□□ -0.32
ARFGAP1-201ENST00000353546 SRSF9Q13242 221 aaKnown RBP eCLIP13.06□□□□□ -0.323e-12■□□□□ 10.4
ARFGAP1-201ENST00000353546 IGFL3Q6UXB1 125 aa13.06□□□□□ -0.32
ARFGAP1-201ENST00000353546 C15orf53Q8NAA6 179 aa13.06□□□□□ -0.32
ARFGAP1-201ENST00000353546 NRGNQ92686 78 aa13.06□□□□□ -0.32
ARFGAP1-201ENST00000353546 Q9UFV3 132 aa13.06□□□□□ -0.32
ARFGAP1-201ENST00000353546 MUC6Q6W4X9 2439 aa13.06□□□□□ -0.32
ARFGAP1-201ENST00000353546 TEX22C9J3V5 150 aa13.06□□□□□ -0.32
ARFGAP1-201ENST00000353546 PRR30Q53SZ7 412 aaPredicted RBP13.06□□□□□ -0.32
ARFGAP1-201ENST00000353546 ASCL5Q7RTU5 278 aa13.06□□□□□ -0.32
ARFGAP1-201ENST00000353546 NDUFA11Q86Y39 141 aa13.06□□□□□ -0.32
ARFGAP1-201ENST00000353546 LINC01587Q99440 93 aa13.06□□□□□ -0.32
ARFGAP1-201ENST00000353546 C9JAW5 83 aa13.05□□□□□ -0.32
ARFGAP1-201ENST00000353546 TMEM14CQ9P0S9 112 aa13.05□□□□□ -0.32
ARFGAP1-201ENST00000353546 LYRM7Q5U5X0 104 aa13.05□□□□□ -0.32
ARFGAP1-201ENST00000353546 FAM57AQ8TBR7 257 aa13.05□□□□□ -0.32
ARFGAP1-201ENST00000353546 MYOZ3Q8TDC0 251 aa13.05□□□□□ -0.32
ARFGAP1-201ENST00000353546 CHCHD5Q9BSY4 110 aa13.05□□□□□ -0.32
ARFGAP1-201ENST00000353546 EGR2P11161 476 aaPredicted RBP13.04□□□□□ -0.32
ARFGAP1-201ENST00000353546 PLNP26678 52 aa13.04□□□□□ -0.32
ARFGAP1-201ENST00000353546 C5orf47Q569G3 176 aa13.04□□□□□ -0.32
ARFGAP1-201ENST00000353546 IGLV2-18A0A075B6J9 118 aa13.04□□□□□ -0.32
ARFGAP1-201ENST00000353546 LOC107984640A0A0U1RRK4 108 aa13.04□□□□□ -0.32
ARFGAP1-201ENST00000353546 IGHG4P01861 327 aa13.04□□□□□ -0.32
ARFGAP1-201ENST00000353546 SIGLEC15Q6ZMC9 328 aa13.04□□□□□ -0.32
ARFGAP1-201ENST00000353546 OR10J6PQ8NGY7 276 aa13.04□□□□□ -0.32
ARFGAP1-201ENST00000353546 ONECUT1Q9UBC0 465 aa13.04□□□□□ -0.32
ARFGAP1-201ENST00000353546 TRBV19A0A075B6N1 114 aa13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 LINC00694P0DN24 101 aa13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 PF4V1P10720 104 aa13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 LINC01559Q495D7 138 aa13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 SCGB1D4Q6XE38 83 aa13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 TRPT1Q86TN4 253 aaKnown RBP13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 Q8N1Y9 231 aa13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 NTN5Q8WTR8 489 aaPredicted RBP13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 NGBQ9NPG2 151 aa13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 IGHV1-3A0A0C4DH29 117 aa13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 I3L2K1 104 aa13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 RNASE6Q93091 150 aaKnown RBP13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 C21orf62Q9NYP8 219 aa13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 ZNF815PA8K554 130 aa13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 IGKV1-17P01599 117 aa13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 ZNF575Q86XF7 245 aa13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 TMEM126AQ9H061 195 aa13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 DYNLRB1Q9NP97 96 aa13.03□□□□□ -0.32
ARFGAP1-201ENST00000353546 COL6A6A6NMZ7 2263 aa13.02□□□□□ -0.32
ARFGAP1-201ENST00000353546 Q8N8P6 123 aa13.02□□□□□ -0.32
ARFGAP1-201ENST00000353546 SPXQ9BT56 116 aa13.02□□□□□ -0.32
ARFGAP1-201ENST00000353546 KAAG1Q9UBP8 84 aa13.02□□□□□ -0.32
ARFGAP1-201ENST00000353546 S4R3C0 116 aa13.02□□□□□ -0.32
ARFGAP1-201ENST00000353546 VKORC1Q9BQB6 163 aa13.02□□□□□ -0.33
ARFGAP1-201ENST00000353546 PRADC1Q9BSG0 188 aa13.02□□□□□ -0.33
ARFGAP1-201ENST00000353546 SCNM1Q9BWG6 230 aa13.02□□□□□ -0.33
ARFGAP1-201ENST00000353546 SPTBN1Q01082 2364 aaKnown RBP13.01□□□□□ -0.33
ARFGAP1-201ENST00000353546 F8VRH5 84 aa13.01□□□□□ -0.33
ARFGAP1-201ENST00000353546 IGLV1-47P01700 117 aa13.01□□□□□ -0.33
ARFGAP1-201ENST00000353546 PLGLAQ15195 96 aa13.01□□□□□ -0.33
ARFGAP1-201ENST00000353546 COX7A1P24310 79 aa13.01□□□□□ -0.33
ARFGAP1-201ENST00000353546 MAP1AP78559 2803 aaPredicted RBP13.01□□□□□ -0.33
ARFGAP1-201ENST00000353546 COL12A1Q99715 3063 aa13□□□□□ -0.33
ARFGAP1-201ENST00000353546 IGF2RP11717 2491 aa13□□□□□ -0.33
ARFGAP1-201ENST00000353546 TEX49A0A1B0GTD5 131 aa13□□□□□ -0.33
ARFGAP1-201ENST00000353546 BUB1B-PAK6H3BSN5 160 aa13□□□□□ -0.33
ARFGAP1-201ENST00000353546 IGLC6P0CF74 106 aa13□□□□□ -0.33
ARFGAP1-201ENST00000353546 KLHL30-AS1Q8NEE0 82 aa13□□□□□ -0.33
ARFGAP1-201ENST00000353546 SHANK2-AS3Q9BTD1 123 aa13□□□□□ -0.33
ARFGAP1-201ENST00000353546 SPANXA1Q9NS26 97 aa13□□□□□ -0.33
ARFGAP1-201ENST00000353546 CFC1BP0CG36 223 aa13□□□□□ -0.33
ARFGAP1-201ENST00000353546 CFC1P0CG37 223 aa13□□□□□ -0.33
ARFGAP1-201ENST00000353546 ZNF80P51504 273 aaPredicted RBP13□□□□□ -0.33
ARFGAP1-201ENST00000353546 H7C1H1 209 aa12.99□□□□□ -0.33
ARFGAP1-201ENST00000353546 SLC25A16P16260 332 aa12.99□□□□□ -0.33
ARFGAP1-201ENST00000353546 IGF2-ASQ6U949 168 aa12.99□□□□□ -0.33
ARFGAP1-201ENST00000353546 LY6HO94772 140 aa12.99□□□□□ -0.33
ARFGAP1-201ENST00000353546 PRR25Q96S07 402 aa12.99□□□□□ -0.33
ARFGAP1-201ENST00000353546 ANKHD1Q8IWZ3 2542 aaKnown RBP12.99□□□□□ -0.33
ARFGAP1-201ENST00000353546 LAGE3Q14657 143 aa12.98□□□□□ -0.33
ARFGAP1-201ENST00000353546 TRAV8-4A0A0B4J246 113 aa12.98□□□□□ -0.33
ARFGAP1-201ENST00000353546 FOXC1Q12948 553 aa12.98□□□□□ -0.33
ARFGAP1-201ENST00000353546 DTX2Q86UW9 622 aa12.98□□□□□ -0.33
ARFGAP1-201ENST00000353546 C10orf126Q8N4M7 172 aa12.98□□□□□ -0.33
ARFGAP1-201ENST00000353546 DNAJC30Q96LL9 226 aa12.98□□□□□ -0.33
ARFGAP1-201ENST00000353546 KLK15Q9H2R5 256 aa12.98□□□□□ -0.33
ARFGAP1-201ENST00000353546 ZFHX3Q15911 3703 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms