RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 C9orf47Q6ZRZ4 202 aa8.78□□□□□ -1
PTPN2-201ENST00000309660 USMG5Q96IX5 58 aa8.78□□□□□ -1
PTPN2-201ENST00000309660 DKK2Q9UBU2 259 aa8.78□□□□□ -1
PTPN2-201ENST00000309660 GPHB5Q86YW7 130 aa8.78□□□□□ -1
PTPN2-201ENST00000309660 CBY3A6NI87 242 aa8.78□□□□□ -1
PTPN2-201ENST00000309660 ZNF124Q15973 351 aa8.78□□□□□ -1
PTPN2-201ENST00000309660 SCRT2Q9NQ03 307 aa8.78□□□□□ -1
PTPN2-201ENST00000309660 A0A0G2JLM5 398 aa8.77□□□□□ -1.01
PTPN2-201ENST00000309660 PPBPP02775 128 aa8.77□□□□□ -1.01
PTPN2-201ENST00000309660 MGPP08493 103 aa8.77□□□□□ -1.01
PTPN2-201ENST00000309660 TMEM158Q8WZ71 300 aa8.77□□□□□ -1.01
PTPN2-201ENST00000309660 NOTCH3Q9UM47 2321 aa8.77□□□□□ -1.01
PTPN2-201ENST00000309660 IGHV7-4-1A0A0J9YVY3 117 aa8.77□□□□□ -1.01
PTPN2-201ENST00000309660 RNF223E7ERA6 249 aa8.77□□□□□ -1.01
PTPN2-201ENST00000309660 DAZ1Q9NQZ3 744 aaKnown RBP8.77□□□□□ -1.01
PTPN2-201ENST00000309660 PHLDA3Q9Y5J5 127 aa8.77□□□□□ -1.01
PTPN2-201ENST00000309660 C14orf178Q8N769 122 aaPredicted RBP8.77□□□□□ -1.01
PTPN2-201ENST00000309660 OR2K2Q8NGT1 345 aa8.77□□□□□ -1.01
PTPN2-201ENST00000309660 PTTG1IPP53801 180 aa8.76□□□□□ -1.01
PTPN2-201ENST00000309660 VAMP3Q15836 100 aa8.76□□□□□ -1.01
PTPN2-201ENST00000309660 ANXA2RQ3ZCQ2 193 aa8.76□□□□□ -1.01
PTPN2-201ENST00000309660 FBN2P35556 2912 aa8.76□□□□□ -1.01
PTPN2-201ENST00000309660 GNRH2O43555 120 aa8.76□□□□□ -1.01
PTPN2-201ENST00000309660 COX6B1P14854 86 aa8.76□□□□□ -1.01
PTPN2-201ENST00000309660 KLK9Q2XQG4 91 aa8.76□□□□□ -1.01
PTPN2-201ENST00000309660 MRPL53Q96EL3 112 aaKnown RBP8.76□□□□□ -1.01
PTPN2-201ENST00000309660 KLK9Q9UKQ9 250 aa8.76□□□□□ -1.01
PTPN2-201ENST00000309660 C7orf71A4D174 169 aa8.75□□□□□ -1.01
PTPN2-201ENST00000309660 ZNF688P0C7X2 276 aa8.75□□□□□ -1.01
PTPN2-201ENST00000309660 FOXC2Q99958 501 aa8.75□□□□□ -1.01
PTPN2-201ENST00000309660 CNFNQ9BYD5 112 aa8.75□□□□□ -1.01
PTPN2-201ENST00000309660 MS4A6AQ9H2W1 248 aa8.75□□□□□ -1.01
PTPN2-201ENST00000309660 PPP1R14DQ9NXH3 145 aa8.75□□□□□ -1.01
PTPN2-201ENST00000309660 PEF1Q9UBV8 284 aaKnown RBP8.75□□□□□ -1.01
PTPN2-201ENST00000309660 TRAV21A0A0B4J279 112 aa8.75□□□□□ -1.01
PTPN2-201ENST00000309660 ZFAND2AQ8N6M9 145 aa8.75□□□□□ -1.01
PTPN2-201ENST00000309660 LINC00477Q96M19 166 aa8.75□□□□□ -1.01
PTPN2-201ENST00000309660 NXT2Q9NPJ8 142 aaKnown RBP8.75□□□□□ -1.01
PTPN2-201ENST00000309660 OVOL1O14753 267 aa8.74□□□□□ -1.01
PTPN2-201ENST00000309660 ASIPP42127 132 aa8.74□□□□□ -1.01
PTPN2-201ENST00000309660 CRIP2P52943 208 aaPredicted RBP8.74□□□□□ -1.01
PTPN2-201ENST00000309660 SRSF2Q01130 221 aaKnown RBP8.74□□□□□ -1.01
PTPN2-201ENST00000309660 BBC3Q96PG8 261 aaPredicted RBP8.74□□□□□ -1.01
PTPN2-201ENST00000309660 SPOCK3Q9BQ16 436 aa8.74□□□□□ -1.01
PTPN2-201ENST00000309660 COX8AP10176 69 aa8.74□□□□□ -1.01
PTPN2-201ENST00000309660 LINC01356Q8N9X3 169 aa8.74□□□□□ -1.01
PTPN2-201ENST00000309660 TTTY13Q9BZ97 58 aa8.74□□□□□ -1.01
PTPN2-201ENST00000309660 BEX4Q9NWD9 120 aaPredicted RBP8.74□□□□□ -1.01
PTPN2-201ENST00000309660 TEX15Q9BXT5 2789 aa8.74□□□□□ -1.01
PTPN2-201ENST00000309660 LGALS9BQ3B8N2 356 aa8.74□□□□□ -1.01
PTPN2-201ENST00000309660 BVES-AS1Q5T3Y7 98 aa8.74□□□□□ -1.01
PTPN2-201ENST00000309660 LGALS9CQ6DKI2 356 aa8.74□□□□□ -1.01
PTPN2-201ENST00000309660 PCP2Q8IVA1 136 aa8.74□□□□□ -1.01
PTPN2-201ENST00000309660 COX11Q9Y6N1 276 aa8.74□□□□□ -1.01
PTPN2-201ENST00000309660 AGRNO00468 2067 aa8.73□□□□□ -1.01
PTPN2-201ENST00000309660 CUBNO60494 3623 aa8.73□□□□□ -1.01
PTPN2-201ENST00000309660 C12orf54Q6X4T0 127 aa8.73□□□□□ -1.01
PTPN2-201ENST00000309660 SMPXQ9UHP9 88 aa8.73□□□□□ -1.01
PTPN2-201ENST00000309660 MXRA5Q9NR99 2828 aa8.73□□□□□ -1.01
PTPN2-201ENST00000309660 WNK1Q9H4A3 2382 aa8.73□□□□□ -1.01
PTPN2-201ENST00000309660 SMIM17P0DL12 118 aa8.73□□□□□ -1.01
PTPN2-201ENST00000309660 FCER1GP30273 86 aa8.73□□□□□ -1.01
PTPN2-201ENST00000309660 SYNJ2BPP57105 145 aa8.73□□□□□ -1.01
PTPN2-201ENST00000309660 PSMG4Q5JS54 123 aa8.73□□□□□ -1.01
PTPN2-201ENST00000309660 HIST2H2BDQ6DRA6 164 aa8.73□□□□□ -1.01
PTPN2-201ENST00000309660 TMEM160Q9NX00 188 aa8.73□□□□□ -1.01
PTPN2-201ENST00000309660 TRAV12-3A0A0B4J271 114 aa8.73□□□□□ -1.01
PTPN2-201ENST00000309660 IGLV1-40P01703 118 aa8.73□□□□□ -1.01
PTPN2-201ENST00000309660 KRTAP10-9P60411 292 aa8.73□□□□□ -1.01
PTPN2-201ENST00000309660 H3BUA1 57 aa8.72□□□□□ -1.01
PTPN2-201ENST00000309660 SOCS3O14543 225 aa8.72□□□□□ -1.01
PTPN2-201ENST00000309660 KHDC1LQ5JSQ8 128 aa8.72□□□□□ -1.01
PTPN2-201ENST00000309660 RPL39LQ96EH5 51 aaKnown RBP8.72□□□□□ -1.01
PTPN2-201ENST00000309660 TRAV12-2A0A075B6T6 113 aa8.72□□□□□ -1.01
PTPN2-201ENST00000309660 ATP6V0BQ99437 205 aa8.72□□□□□ -1.01
PTPN2-201ENST00000309660 SLC25A16P16260 332 aa8.71□□□□□ -1.01
PTPN2-201ENST00000309660 NEGR1Q7Z3B1 354 aa8.71□□□□□ -1.01
PTPN2-201ENST00000309660 GTSCR1Q86UQ5 136 aa8.71□□□□□ -1.01
PTPN2-201ENST00000309660 Q8N8P6 123 aa8.71□□□□□ -1.01
PTPN2-201ENST00000309660 MYOZ3Q8TDC0 251 aa8.71□□□□□ -1.01
PTPN2-201ENST00000309660 PRRC2AP48634 2157 aaKnown RBP8.71□□□□□ -1.01
PTPN2-201ENST00000309660 HTN1P15515 57 aa8.71□□□□□ -1.02
PTPN2-201ENST00000309660 FAM159AQ6UWV7 190 aa8.71□□□□□ -1.02
PTPN2-201ENST00000309660 PSMG3-AS1Q96PY0 264 aa8.71□□□□□ -1.02
PTPN2-201ENST00000309660 NAA38Q9BRA0 125 aaKnown RBP8.71□□□□□ -1.02
PTPN2-201ENST00000309660 F5H697 171 aa8.71□□□□□ -1.02
PTPN2-201ENST00000309660 CCL25O15444 150 aa8.71□□□□□ -1.02
PTPN2-201ENST00000309660 CD5LO43866 347 aa8.71□□□□□ -1.02
PTPN2-201ENST00000309660 CD7P09564 240 aa8.71□□□□□ -1.02
PTPN2-201ENST00000309660 GAGE1Q13065 139 aa8.71□□□□□ -1.02
PTPN2-201ENST00000309660 LAGE3Q14657 143 aa8.71□□□□□ -1.02
PTPN2-201ENST00000309660 C2orf91Q6ZV80 131 aa8.71□□□□□ -1.02
PTPN2-201ENST00000309660 TMEM8BA6NDV4 472 aa8.7□□□□□ -1.02
PTPN2-201ENST00000309660 ID1P41134 155 aa8.7□□□□□ -1.02
PTPN2-201ENST00000309660 DSCR9P59020 149 aa8.7□□□□□ -1.02
PTPN2-201ENST00000309660 FAM74A4Q5TZK3 123 aa8.7□□□□□ -1.02
PTPN2-201ENST00000309660 NRACQ8N912 160 aa8.7□□□□□ -1.02
PTPN2-201ENST00000309660 DEFB136Q30KP8 78 aa8.7□□□□□ -1.02
PTPN2-201ENST00000309660 JPT2Q9H910 190 aa8.7□□□□□ -1.02
PTPN2-201ENST00000309660 LENEPQ9Y5L5 61 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms