RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 LINC00467Q9BRT7 94 aa19.58■□□□□ 0.73
HDAC3-201ENST00000305264 RNASE7Q9H1E1 156 aaKnown RBP19.58■□□□□ 0.73
HDAC3-201ENST00000305264 BIN3Q9NQY0 253 aa19.58■□□□□ 0.73
HDAC3-201ENST00000305264 ORM1P02763 201 aa19.57■□□□□ 0.72
HDAC3-201ENST00000305264 NDUFA5Q16718 116 aa19.57■□□□□ 0.72
HDAC3-201ENST00000305264 TDRG1Q3Y452 100 aa19.57■□□□□ 0.72
HDAC3-201ENST00000305264 CBY3A6NI87 242 aa19.57■□□□□ 0.72
HDAC3-201ENST00000305264 RPL19P84098 196 aaKnown RBP19.57■□□□□ 0.72
HDAC3-201ENST00000305264 RRN3P1Q2M238 152 aa19.57■□□□□ 0.72
HDAC3-201ENST00000305264 SEC11CQ9BY50 192 aa19.57■□□□□ 0.72
HDAC3-201ENST00000305264 Q8NAQ8 132 aa19.56■□□□□ 0.72
HDAC3-201ENST00000305264 LINC01559Q495D7 138 aa19.55■□□□□ 0.72
HDAC3-201ENST00000305264 ISOC2Q96AB3 205 aa19.55■□□□□ 0.72
HDAC3-201ENST00000305264 DAZAP1Q96EP5 407 aaKnown RBP19.55■□□□□ 0.72
HDAC3-201ENST00000305264 TMSB15BA0A087X1C1 80 aa19.55■□□□□ 0.72
HDAC3-201ENST00000305264 IGHV4-28A0A0C4DH34 117 aa19.55■□□□□ 0.72
HDAC3-201ENST00000305264 B4DEV8 164 aa19.55■□□□□ 0.72
HDAC3-201ENST00000305264 TYMSP04818 313 aa19.55■□□□□ 0.72
HDAC3-201ENST00000305264 NUDT10Q8NFP7 164 aa19.55■□□□□ 0.72
HDAC3-201ENST00000305264 NUDT11Q96G61 164 aa19.55■□□□□ 0.72
HDAC3-201ENST00000305264 SMIM9A6NGZ8 99 aa19.54■□□□□ 0.72
HDAC3-201ENST00000305264 KRBOX1C9JBD0 128 aa19.54■□□□□ 0.72
HDAC3-201ENST00000305264 GNRH2O43555 120 aa19.54■□□□□ 0.72
HDAC3-201ENST00000305264 MIFP14174 115 aa19.54■□□□□ 0.72
HDAC3-201ENST00000305264 RNASE8Q8TDE3 154 aaKnown RBP19.54■□□□□ 0.72
HDAC3-201ENST00000305264 DEFB4AO15263 64 aa19.53■□□□□ 0.72
HDAC3-201ENST00000305264 P01737 135 aa19.53■□□□□ 0.72
HDAC3-201ENST00000305264 IBA57Q5T440 356 aaKnown RBP19.53■□□□□ 0.72
HDAC3-201ENST00000305264 ZNF575Q86XF7 245 aa19.53■□□□□ 0.72
HDAC3-201ENST00000305264 KCNS1Q96KK3 526 aa19.53■□□□□ 0.72
HDAC3-201ENST00000305264 TMEM263Q8WUH6 116 aaKnown RBP19.53■□□□□ 0.72
HDAC3-201ENST00000305264 NHLRC4P0CG21 123 aaPredicted RBP19.52■□□□□ 0.72
HDAC3-201ENST00000305264 ERVFC1-1P60608 527 aa19.52■□□□□ 0.72
HDAC3-201ENST00000305264 C10orf91Q5T1B1 145 aa19.52■□□□□ 0.72
HDAC3-201ENST00000305264 FAM231DQ6ZW35 169 aa19.52■□□□□ 0.71
HDAC3-201ENST00000305264 STAB2Q8WWQ8 2551 aa19.51■□□□□ 0.71
HDAC3-201ENST00000305264 PLAC8L1A1L4L8 177 aa19.51■□□□□ 0.71
HDAC3-201ENST00000305264 C11orf72Q8NBR9 251 aa19.51■□□□□ 0.71
HDAC3-201ENST00000305264 C16orf74Q96GX8 76 aa19.51■□□□□ 0.71
HDAC3-201ENST00000305264 MDFICQ9P1T7 246 aa19.51■□□□□ 0.71
HDAC3-201ENST00000305264 TMEM189A5PLL7 270 aa19.5■□□□□ 0.71
HDAC3-201ENST00000305264 OR2D3Q8NGH3 330 aa19.5■□□□□ 0.71
HDAC3-201ENST00000305264 CARHSP1Q9Y2V2 147 aaKnown RBP19.5■□□□□ 0.71
HDAC3-201ENST00000305264 TRGV11A0A075B6L2 103 aa19.5■□□□□ 0.71
HDAC3-201ENST00000305264 GRIFINA4D1Z8 144 aa19.5■□□□□ 0.71
HDAC3-201ENST00000305264 PNRC1Q12796 327 aaPredicted RBP19.5■□□□□ 0.71
HDAC3-201ENST00000305264 SFRP2Q96HF1 295 aa19.5■□□□□ 0.71
HDAC3-201ENST00000305264 IGHV3-16A0A0C4DH30 117 aa19.49■□□□□ 0.71
HDAC3-201ENST00000305264 EMP1P54849 157 aa19.49■□□□□ 0.71
HDAC3-201ENST00000305264 RPP21Q9H633 154 aaKnown RBP19.49■□□□□ 0.71
HDAC3-201ENST00000305264 GSN-AS1Q9NRJ2 163 aa19.49■□□□□ 0.71
HDAC3-201ENST00000305264 ZNF493Q6ZR52 646 aa19.48■□□□□ 0.71
HDAC3-201ENST00000305264 OSTCQ9NRP0 149 aa19.48■□□□□ 0.71
HDAC3-201ENST00000305264 GZMBP10144 247 aa19.47■□□□□ 0.71
HDAC3-201ENST00000305264 GATCO43716 136 aaKnown RBP19.46■□□□□ 0.71
HDAC3-201ENST00000305264 TGP01266 2768 aa19.46■□□□□ 0.71
HDAC3-201ENST00000305264 ASIPP42127 132 aa19.46■□□□□ 0.71
HDAC3-201ENST00000305264 ZNF415Q09FC8 603 aa19.46■□□□□ 0.71
HDAC3-201ENST00000305264 A0A0J9YWU9 116 aa19.45■□□□□ 0.7
HDAC3-201ENST00000305264 RNASE3P12724 160 aaKnown RBP19.45■□□□□ 0.7
HDAC3-201ENST00000305264 C15orf54Q8N8G6 183 aa19.45■□□□□ 0.7
HDAC3-201ENST00000305264 IL17DQ8TAD2 202 aa19.45■□□□□ 0.7
HDAC3-201ENST00000305264 C11orf68Q9H3H3 251 aaKnown RBP19.45■□□□□ 0.7
HDAC3-201ENST00000305264 TCL1AP56279 114 aa19.44■□□□□ 0.7
HDAC3-201ENST00000305264 OR10G8Q8NGN5 311 aa19.44■□□□□ 0.7
HDAC3-201ENST00000305264 V9GYV3 84 aa19.44■□□□□ 0.7
HDAC3-201ENST00000305264 H3BVH4 76 aa19.44■□□□□ 0.7
HDAC3-201ENST00000305264 TIMM8BQ9Y5J9 83 aaPredicted RBP19.44■□□□□ 0.7
HDAC3-201ENST00000305264 S100A4P26447 101 aaKnown RBP19.43■□□□□ 0.7
HDAC3-201ENST00000305264 SNURFLB1AK76 121 aa19.43■□□□□ 0.7
HDAC3-201ENST00000305264 APOC3P02656 99 aa19.43■□□□□ 0.7
HDAC3-201ENST00000305264 DNLZQ5SXM8 178 aa19.43■□□□□ 0.7
HDAC3-201ENST00000305264 NOP10Q9NPE3 64 aaKnown RBP19.43■□□□□ 0.7
HDAC3-201ENST00000305264 CXCL1P09341 107 aa19.42■□□□□ 0.7
HDAC3-201ENST00000305264 RPS20P60866 119 aaKnown RBP19.42■□□□□ 0.7
HDAC3-201ENST00000305264 RNF212Q495C1 297 aa19.42■□□□□ 0.7
HDAC3-201ENST00000305264 C9orf85Q96MD7 179 aa19.42■□□□□ 0.7
HDAC3-201ENST00000305264 U3KQK5 164 aa19.42■□□□□ 0.7
HDAC3-201ENST00000305264 MUC4Q99102 2169 aa19.42■□□□□ 0.7
HDAC3-201ENST00000305264 CELA1Q9UNI1 258 aa19.41■□□□□ 0.7
HDAC3-201ENST00000305264 CT83Q5H943 113 aa19.41■□□□□ 0.7
HDAC3-201ENST00000305264 IL36BQ9NZH7 164 aa19.41■□□□□ 0.7
HDAC3-201ENST00000305264 XKRY2A2RUG3 117 aa19.4■□□□□ 0.7
HDAC3-201ENST00000305264 ARMS2P0C7Q2 107 aa19.4■□□□□ 0.7
HDAC3-201ENST00000305264 DAZ2Q13117 558 aaKnown RBP19.39■□□□□ 0.7
HDAC3-201ENST00000305264 FAM222AQ5U5X8 452 aa19.39■□□□□ 0.7
HDAC3-201ENST00000305264 IGLC6P0CF74 106 aa19.38■□□□□ 0.69
HDAC3-201ENST00000305264 GTSF1Q8WW33 167 aa19.38■□□□□ 0.69
HDAC3-201ENST00000305264 DKK2Q9UBU2 259 aa19.38■□□□□ 0.69
HDAC3-201ENST00000305264 A8MWL6 223 aa19.37■□□□□ 0.69
HDAC3-201ENST00000305264 CLRN3Q8NCR9 226 aa19.37■□□□□ 0.69
HDAC3-201ENST00000305264 TPPP3Q9BW30 176 aa19.37■□□□□ 0.69
HDAC3-201ENST00000305264 SCRT2Q9NQ03 307 aa19.37■□□□□ 0.69
HDAC3-201ENST00000305264 MT-ND4LP03901 98 aa19.37■□□□□ 0.69
HDAC3-201ENST00000305264 FER1L6-AS1Q8NA97 138 aa19.37■□□□□ 0.69
HDAC3-201ENST00000305264 TSKUQ8WUA8 353 aa19.37■□□□□ 0.69
HDAC3-201ENST00000305264 SPXQ9BT56 116 aa19.37■□□□□ 0.69
HDAC3-201ENST00000305264 MRPL16Q9NX20 251 aaKnown RBP19.37■□□□□ 0.69
HDAC3-201ENST00000305264 Q6ZTI0 123 aa19.36■□□□□ 0.69
HDAC3-201ENST00000305264 SPINK4O60575 86 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms