RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 TMEM14CQ9P0S9 112 aa14.69□□□□□ -0.06
SMARCC1-201ENST00000254480 TRAV12-1A0A0B4J245 112 aa14.69□□□□□ -0.06
SMARCC1-201ENST00000254480 CD5LO43866 347 aa14.69□□□□□ -0.06
SMARCC1-201ENST00000254480 DNAJC30Q96LL9 226 aa14.69□□□□□ -0.06
SMARCC1-201ENST00000254480 PTPRQQ9UMZ3 2332 aa14.69□□□□□ -0.06
SMARCC1-201ENST00000254480 EGR2P11161 476 aaPredicted RBP14.69□□□□□ -0.06
SMARCC1-201ENST00000254480 EML6Q6ZMW3 1958 aa14.68□□□□□ -0.06
SMARCC1-201ENST00000254480 SLX1AQ9BQ83 275 aa14.68□□□□□ -0.06
SMARCC1-201ENST00000254480 AGPAT4-IT1Q9H0P7 198 aa14.68□□□□□ -0.06
SMARCC1-201ENST00000254480 CT83Q5H943 113 aa14.68□□□□□ -0.06
SMARCC1-201ENST00000254480 SMIM2Q9BVW6 85 aa14.68□□□□□ -0.06
SMARCC1-201ENST00000254480 FGF6P10767 208 aa14.67□□□□□ -0.06
SMARCC1-201ENST00000254480 IGLL1P15814 213 aa14.67□□□□□ -0.06
SMARCC1-201ENST00000254480 COX11Q9Y6N1 276 aa14.67□□□□□ -0.06
SMARCC1-201ENST00000254480 ELANEP08246 267 aa14.67□□□□□ -0.06
SMARCC1-201ENST00000254480 MRPL53Q96EL3 112 aaKnown RBP14.67□□□□□ -0.06
SMARCC1-201ENST00000254480 NCOR1P1Q9H4R4 102 aa14.67□□□□□ -0.06
SMARCC1-201ENST00000254480 IGHV4-4A0A075B6R2 117 aa14.67□□□□□ -0.06
SMARCC1-201ENST00000254480 RS1O15537 224 aa14.67□□□□□ -0.06
SMARCC1-201ENST00000254480 WISP2O76076 250 aa14.67□□□□□ -0.06
SMARCC1-201ENST00000254480 IGLV3-1P01715 115 aa14.66□□□□□ -0.06
SMARCC1-201ENST00000254480 KAAG1Q9UBP8 84 aa14.66□□□□□ -0.06
SMARCC1-201ENST00000254480 TSSC4Q9Y5U2 329 aaPredicted RBP14.66□□□□□ -0.06
SMARCC1-201ENST00000254480 MUC6Q6W4X9 2439 aa14.66□□□□□ -0.06
SMARCC1-201ENST00000254480 DEFB105AQ8NG35 78 aa14.66□□□□□ -0.06
SMARCC1-201ENST00000254480 HAMPP81172 84 aa14.65□□□□□ -0.06
SMARCC1-201ENST00000254480 IGLV10-54A0A075B6I4 117 aa14.65□□□□□ -0.06
SMARCC1-201ENST00000254480 DEFB113Q30KQ7 82 aa14.65□□□□□ -0.06
SMARCC1-201ENST00000254480 SRCAPQ6ZRS2 3230 aa14.65□□□□□ -0.06
SMARCC1-201ENST00000254480 CENPVL3A0A0U1RRI6 287 aa14.65□□□□□ -0.06
SMARCC1-201ENST00000254480 TINCRA0A1B0GVN0 87 aa14.65□□□□□ -0.06
SMARCC1-201ENST00000254480 KMT2EQ8IZD2 1858 aa14.65□□□□□ -0.06
SMARCC1-201ENST00000254480 H3BMM0 161 aa14.65□□□□□ -0.06
SMARCC1-201ENST00000254480 WIPF2Q8TF74 440 aaPredicted RBP14.65□□□□□ -0.06
SMARCC1-201ENST00000254480 UBE2WQ96B02 151 aa14.65□□□□□ -0.06
SMARCC1-201ENST00000254480 OVOL2Q9BRP0 275 aa14.65□□□□□ -0.06
SMARCC1-201ENST00000254480 DKK4Q9UBT3 224 aa14.64□□□□□ -0.07
SMARCC1-201ENST00000254480 CRLF1O75462 422 aa14.64□□□□□ -0.07
SMARCC1-201ENST00000254480 PRR20EP86478 221 aa14.64□□□□□ -0.07
SMARCC1-201ENST00000254480 PRR20CP86479 221 aa14.64□□□□□ -0.07
SMARCC1-201ENST00000254480 PRR20DP86480 221 aa14.64□□□□□ -0.07
SMARCC1-201ENST00000254480 PRR20BP86481 221 aa14.64□□□□□ -0.07
SMARCC1-201ENST00000254480 PRR20AP86496 221 aa14.64□□□□□ -0.07
SMARCC1-201ENST00000254480 DENND4CQ5VZ89 1909 aa14.64□□□□□ -0.07
SMARCC1-201ENST00000254480 ZMAT4Q9H898 229 aa14.64□□□□□ -0.07
SMARCC1-201ENST00000254480 SOCS3O14543 225 aa14.63□□□□□ -0.07
SMARCC1-201ENST00000254480 DEFB1P60022 68 aa14.63□□□□□ -0.07
SMARCC1-201ENST00000254480 AJUBAQ96IF1 538 aa14.63□□□□□ -0.07
SMARCC1-201ENST00000254480 C5orf38Q86SI9 138 aa14.63□□□□□ -0.07
SMARCC1-201ENST00000254480 RPL39LQ96EH5 51 aaKnown RBP14.63□□□□□ -0.07
SMARCC1-201ENST00000254480 LTAP01374 205 aa14.62□□□□□ -0.07
SMARCC1-201ENST00000254480 FAM231DQ6ZW35 169 aa14.62□□□□□ -0.07
SMARCC1-201ENST00000254480 KLF2Q9Y5W3 355 aaPredicted RBP14.62□□□□□ -0.07
SMARCC1-201ENST00000254480 DEFB4AO15263 64 aa14.62□□□□□ -0.07
SMARCC1-201ENST00000254480 TAL2Q16559 108 aa14.62□□□□□ -0.07
SMARCC1-201ENST00000254480 IGHV7-81A0A0B4J1V7 117 aa14.62□□□□□ -0.07
SMARCC1-201ENST00000254480 CRYGCP07315 174 aa14.62□□□□□ -0.07
SMARCC1-201ENST00000254480 FOXI2Q6ZQN5 318 aa14.62□□□□□ -0.07
SMARCC1-201ENST00000254480 TNCP24821 2201 aa14.61□□□□□ -0.07
SMARCC1-201ENST00000254480 LHBP01229 141 aa14.61□□□□□ -0.07
SMARCC1-201ENST00000254480 IGLC2P0DOY2 106 aa14.61□□□□□ -0.07
SMARCC1-201ENST00000254480 IGLC3P0DOY3 106 aa14.61□□□□□ -0.07
SMARCC1-201ENST00000254480 J3QQQ9 107 aa14.61□□□□□ -0.07
SMARCC1-201ENST00000254480 ADORA2A-AS1P86434 159 aa14.61□□□□□ -0.07
SMARCC1-201ENST00000254480 PIFOQ8TCI5 191 aa14.61□□□□□ -0.07
SMARCC1-201ENST00000254480 ETDBQ3ZM63 59 aa14.61□□□□□ -0.07
SMARCC1-201ENST00000254480 KIF26AQ9ULI4 1882 aaPredicted RBP14.61□□□□□ -0.07
SMARCC1-201ENST00000254480 AMTNQ6UX39 209 aa14.6□□□□□ -0.07
SMARCC1-201ENST00000254480 F8VRH5 84 aa14.6□□□□□ -0.07
SMARCC1-201ENST00000254480 TANC1Q9C0D5 1861 aa14.59□□□□□ -0.07
SMARCC1-201ENST00000254480 IGHV3-30P01768 117 aa14.59□□□□□ -0.07
SMARCC1-201ENST00000254480 IGHV3-33P01772 117 aa14.59□□□□□ -0.07
SMARCC1-201ENST00000254480 IGHV3-30-3P0DP02 117 aa14.59□□□□□ -0.07
SMARCC1-201ENST00000254480 IGHV3-30-5P0DP03 117 aa14.59□□□□□ -0.07
SMARCC1-201ENST00000254480 A0A1W2PNU3 283 aaPredicted RBP14.59□□□□□ -0.07
SMARCC1-201ENST00000254480 UBE2BP63146 152 aa14.59□□□□□ -0.07
SMARCC1-201ENST00000254480 MSRB1Q9NZV6 116 aa14.59□□□□□ -0.07
SMARCC1-201ENST00000254480 RBMY1FQ15415 496 aaKnown RBP14.58□□□□□ -0.08
SMARCC1-201ENST00000254480 COX8AP10176 69 aa14.58□□□□□ -0.08
SMARCC1-201ENST00000254480 LGALS9BQ3B8N2 356 aa14.58□□□□□ -0.08
SMARCC1-201ENST00000254480 LGALS9CQ6DKI2 356 aa14.58□□□□□ -0.08
SMARCC1-201ENST00000254480 RHOHQ15669 191 aa14.58□□□□□ -0.08
SMARCC1-201ENST00000254480 K7EMI3 77 aa14.57□□□□□ -0.08
SMARCC1-201ENST00000254480 GP9P14770 177 aa14.57□□□□□ -0.08
SMARCC1-201ENST00000254480 H3BMG7 143 aa14.57□□□□□ -0.08
SMARCC1-201ENST00000254480 CEND1Q8N111 149 aa14.57□□□□□ -0.08
SMARCC1-201ENST00000254480 OR11H6Q8NGC7 330 aa14.57□□□□□ -0.08
SMARCC1-201ENST00000254480 HERVK_113P63121 156 aa14.57□□□□□ -0.08
SMARCC1-201ENST00000254480 C20orf144Q9BQM9 153 aa14.57□□□□□ -0.08
SMARCC1-201ENST00000254480 IGHV4OR15-8A0A075B7B6 117 aa14.57□□□□□ -0.08
SMARCC1-201ENST00000254480 A0A087WW49 117 aa14.57□□□□□ -0.08
SMARCC1-201ENST00000254480 C9orf118A6NHY6 69 aa14.57□□□□□ -0.08
SMARCC1-201ENST00000254480 RPL18AQ02543 176 aaKnown RBP14.57□□□□□ -0.08
SMARCC1-201ENST00000254480 Q6ZVH6 145 aa14.57□□□□□ -0.08
SMARCC1-201ENST00000254480 BVES-AS1Q5T3Y7 98 aa14.56□□□□□ -0.08
SMARCC1-201ENST00000254480 ZFP36P26651 326 aaKnown RBP14.56□□□□□ -0.08
SMARCC1-201ENST00000254480 CITED2Q99967 270 aaPredicted RBP14.56□□□□□ -0.08
SMARCC1-201ENST00000254480 Q9H8V8 135 aa14.56□□□□□ -0.08
SMARCC1-201ENST00000254480 GYPEP15421 78 aa14.56□□□□□ -0.08
SMARCC1-201ENST00000254480 POU2AF1Q16633 256 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms