RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PRB2P02812 416 aaPredicted RBP10.4□□□□□ -0.75
COL1A1-201ENST00000225964 ATP5G1P05496 136 aa10.4□□□□□ -0.75
COL1A1-201ENST00000225964 C20orf78Q9BR46 151 aa10.4□□□□□ -0.75
COL1A1-201ENST00000225964 PRO1854Q9UHT4 67 aa10.4□□□□□ -0.75
COL1A1-201ENST00000225964 INTS1Q8N201 2190 aaKnown RBP10.39□□□□□ -0.75
COL1A1-201ENST00000225964 C4orf48Q5BLP8 95 aa10.39□□□□□ -0.75
COL1A1-201ENST00000225964 ATP6V0E2Q8NHE4 81 aa10.39□□□□□ -0.75
COL1A1-201ENST00000225964 Q9H8V8 135 aa10.39□□□□□ -0.75
COL1A1-201ENST00000225964 MYLKQ15746 1914 aa10.39□□□□□ -0.75
COL1A1-201ENST00000225964 TRAV4A0A0B4J268 109 aa10.39□□□□□ -0.75
COL1A1-201ENST00000225964 TRACP01848 142 aa10.39□□□□□ -0.75
COL1A1-201ENST00000225964 ZNF491Q8N8L2 437 aa10.39□□□□□ -0.75
COL1A1-201ENST00000225964 SPRNQ5BIV9 151 aa10.39□□□□□ -0.75
COL1A1-201ENST00000225964 CENPVL3A0A0U1RRI6 287 aa10.39□□□□□ -0.75
COL1A1-201ENST00000225964 MRPL36Q9P0J6 103 aaKnown RBP10.39□□□□□ -0.75
COL1A1-201ENST00000225964 KAAG1Q9UBP8 84 aa10.39□□□□□ -0.75
COL1A1-201ENST00000225964 RS1O15537 224 aa10.38□□□□□ -0.75
COL1A1-201ENST00000225964 PLA2G5P39877 138 aa10.38□□□□□ -0.75
COL1A1-201ENST00000225964 LGALS9BQ3B8N2 356 aa10.38□□□□□ -0.75
COL1A1-201ENST00000225964 LGALS9CQ6DKI2 356 aa10.38□□□□□ -0.75
COL1A1-201ENST00000225964 ORMDL1Q9P0S3 153 aa10.38□□□□□ -0.75
COL1A1-201ENST00000225964 C9orf118A6NHY6 69 aa10.38□□□□□ -0.75
COL1A1-201ENST00000225964 EGR2P11161 476 aaPredicted RBP10.38□□□□□ -0.75
COL1A1-201ENST00000225964 WIPF2Q8TF74 440 aaPredicted RBP10.38□□□□□ -0.75
COL1A1-201ENST00000225964 TANC1Q9C0D5 1861 aa10.38□□□□□ -0.75
COL1A1-201ENST00000225964 F8VRH5 84 aa10.38□□□□□ -0.75
COL1A1-201ENST00000225964 C15orf53Q8NAA6 179 aa10.38□□□□□ -0.75
COL1A1-201ENST00000225964 A8MWP6 167 aa10.37□□□□□ -0.75
COL1A1-201ENST00000225964 ADCYAP1P18509 176 aa10.37□□□□□ -0.75
COL1A1-201ENST00000225964 ALPK2Q86TB3 2170 aa10.37□□□□□ -0.75
COL1A1-201ENST00000225964 IGHV4OR15-8A0A075B7B6 117 aa10.37□□□□□ -0.75
COL1A1-201ENST00000225964 A0A087WW49 117 aa10.37□□□□□ -0.75
COL1A1-201ENST00000225964 COX7A2LO14548 114 aa10.37□□□□□ -0.75
COL1A1-201ENST00000225964 PYY3Q5JQD4 70 aa10.37□□□□□ -0.75
COL1A1-201ENST00000225964 KLF2Q9Y5W3 355 aaPredicted RBP10.37□□□□□ -0.75
COL1A1-201ENST00000225964 K7ERJ3 54 aa10.37□□□□□ -0.75
COL1A1-201ENST00000225964 CACNA1DQ01668 2161 aa10.37□□□□□ -0.75
COL1A1-201ENST00000225964 DEFB4AO15263 64 aa10.37□□□□□ -0.75
COL1A1-201ENST00000225964 NCR3O14931 201 aa10.37□□□□□ -0.75
COL1A1-201ENST00000225964 AJUBAQ96IF1 538 aa10.37□□□□□ -0.75
COL1A1-201ENST00000225964 SLX1AQ9BQ83 275 aa10.37□□□□□ -0.75
COL1A1-201ENST00000225964 LTAP01374 205 aa10.36□□□□□ -0.75
COL1A1-201ENST00000225964 AMTNQ6UX39 209 aa10.36□□□□□ -0.75
COL1A1-201ENST00000225964 C9orf47Q6ZRZ4 202 aa10.36□□□□□ -0.75
COL1A1-201ENST00000225964 PLXNA2O75051 1894 aa10.36□□□□□ -0.75
COL1A1-201ENST00000225964 WT1P19544 449 aaPredicted RBP10.36□□□□□ -0.75
COL1A1-201ENST00000225964 FAM231DQ6ZW35 169 aa10.36□□□□□ -0.75
COL1A1-201ENST00000225964 NPBQ8NG41 125 aa10.36□□□□□ -0.75
COL1A1-201ENST00000225964 PPDPFLQ8WWR9 84 aa10.36□□□□□ -0.75
COL1A1-201ENST00000225964 BLCAPP62952 87 aa10.36□□□□□ -0.75
COL1A1-201ENST00000225964 FANCD2OSQ96PS1 177 aa10.36□□□□□ -0.75
COL1A1-201ENST00000225964 DKK2Q9UBU2 259 aa10.36□□□□□ -0.75
COL1A1-201ENST00000225964 CEP290O15078 2479 aa10.35□□□□□ -0.75
COL1A1-201ENST00000225964 RBAKDNA6NC62 111 aa10.35□□□□□ -0.75
COL1A1-201ENST00000225964 BVES-AS1Q5T3Y7 98 aa10.35□□□□□ -0.75
COL1A1-201ENST00000225964 SH2D6Q7Z4S9 175 aa10.35□□□□□ -0.75
COL1A1-201ENST00000225964 HERV-K104P63124 156 aa10.35□□□□□ -0.75
COL1A1-201ENST00000225964 IGLL5B9A064 214 aa10.35□□□□□ -0.75
COL1A1-201ENST00000225964 ETV2O00321 342 aaPredicted RBP10.35□□□□□ -0.75
COL1A1-201ENST00000225964 AGPAT4-IT1Q9H0P7 198 aa10.35□□□□□ -0.75
COL1A1-201ENST00000225964 COX8AP10176 69 aa10.35□□□□□ -0.75
COL1A1-201ENST00000225964 MRPL52Q86TS9 123 aaKnown RBP10.34□□□□□ -0.75
COL1A1-201ENST00000225964 RITA1Q96K30 269 aa10.34□□□□□ -0.75
COL1A1-201ENST00000225964 FUSP35637 526 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL1A1-201ENST00000225964 DOCK7Q96N67 2140 aa10.34□□□□□ -0.75
COL1A1-201ENST00000225964 IGLC7A0M8Q6 106 aa10.34□□□□□ -0.75
COL1A1-201ENST00000225964 COX7B2Q8TF08 81 aa10.34□□□□□ -0.75
COL1A1-201ENST00000225964 RPL39LQ96EH5 51 aaKnown RBP10.34□□□□□ -0.75
COL1A1-201ENST00000225964 MED12Q93074 2177 aa10.34□□□□□ -0.75
COL1A1-201ENST00000225964 DAZ2Q13117 558 aaKnown RBP10.34□□□□□ -0.75
COL1A1-201ENST00000225964 DEFB135Q30KP9 77 aa10.34□□□□□ -0.75
COL1A1-201ENST00000225964 ZNF493Q6ZR52 646 aa10.34□□□□□ -0.75
COL1A1-201ENST00000225964 DAZ4Q86SG3 579 aaKnown RBP10.34□□□□□ -0.75
COL1A1-201ENST00000225964 DAZ3Q9NR90 486 aaKnown RBP10.34□□□□□ -0.75
COL1A1-201ENST00000225964 HHLA3Q9XRX5 114 aa10.34□□□□□ -0.75
COL1A1-201ENST00000225964 BAALC-AS2P0C853 105 aa10.33□□□□□ -0.76
COL1A1-201ENST00000225964 C9JQL5 133 aa10.33□□□□□ -0.76
COL1A1-201ENST00000225964 C5orf47Q569G3 176 aa10.33□□□□□ -0.76
COL1A1-201ENST00000225964 IFITM1P13164 125 aa10.33□□□□□ -0.76
COL1A1-201ENST00000225964 ADORA2A-AS1P86434 159 aa10.33□□□□□ -0.76
COL1A1-201ENST00000225964 C8orf31Q8N9H6 132 aa10.33□□□□□ -0.76
COL1A1-201ENST00000225964 C10orf105Q8TEF2 133 aa10.33□□□□□ -0.76
COL1A1-201ENST00000225964 ZNF524Q96C55 264 aa10.33□□□□□ -0.76
COL1A1-201ENST00000225964 RNF152Q8N8N0 203 aa10.33□□□□□ -0.76
COL1A1-201ENST00000225964 ANKRD29Q8N6D5 301 aa10.33□□□□□ -0.76
COL1A1-201ENST00000225964 IGHV7-81A0A0B4J1V7 117 aa10.32□□□□□ -0.76
COL1A1-201ENST00000225964 IGLC2P0DOY2 106 aa10.32□□□□□ -0.76
COL1A1-201ENST00000225964 IGLC3P0DOY3 106 aa10.32□□□□□ -0.76
COL1A1-201ENST00000225964 RNF138Q8WVD3 245 aa10.32□□□□□ -0.76
COL1A1-201ENST00000225964 TM2D2Q9BX73 214 aa10.32□□□□□ -0.76
COL1A1-201ENST00000225964 F8W1H4 67 aa10.32□□□□□ -0.76
COL1A1-201ENST00000225964 HIST2H2BCQ6DN03 193 aa10.32□□□□□ -0.76
COL1A1-201ENST00000225964 SPANXA1Q9NS26 97 aa10.32□□□□□ -0.76
COL1A1-201ENST00000225964 NLRC5Q86WI3 1866 aa10.32□□□□□ -0.76
COL1A1-201ENST00000225964 ZDBF2Q9HCK1 2354 aa10.32□□□□□ -0.76
COL1A1-201ENST00000225964 ARFGEF3Q5TH69 2177 aa10.32□□□□□ -0.76
COL1A1-201ENST00000225964 NDUFB1O75438 58 aa10.32□□□□□ -0.76
COL1A1-201ENST00000225964 Q6ZWC4 215 aa10.31□□□□□ -0.76
COL1A1-201ENST00000225964 C5orf56Q8N8D9 126 aa10.31□□□□□ -0.76
COL1A1-201ENST00000225964 C4orf3Q8WVX3 66 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms