RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 EDA2RQ9HAV5 297 aa14.87□□□□□ -0.03
SMPD3-201ENST00000219334 ZNF493Q6ZR52 646 aa14.87□□□□□ -0.03
SMPD3-201ENST00000219334 PLXNA4Q9HCM2 1894 aa14.86□□□□□ -0.03
SMPD3-201ENST00000219334 DYNAPQ8N1N2 210 aa14.86□□□□□ -0.03
SMPD3-201ENST00000219334 HLA-DMBP28068 263 aa14.86□□□□□ -0.03
SMPD3-201ENST00000219334 XCL1P47992 114 aa14.86□□□□□ -0.03
SMPD3-201ENST00000219334 GNRH2O43555 120 aa14.86□□□□□ -0.03
SMPD3-201ENST00000219334 SPRNQ5BIV9 151 aa14.86□□□□□ -0.03
SMPD3-201ENST00000219334 Q6ZQT7 251 aa14.86□□□□□ -0.03
SMPD3-201ENST00000219334 ZNF726P1Q15940 193 aa14.86□□□□□ -0.03
SMPD3-201ENST00000219334 RNF152Q8N8N0 203 aa14.86□□□□□ -0.03
SMPD3-201ENST00000219334 ICOSQ9Y6W8 199 aa14.85□□□□□ -0.03
SMPD3-201ENST00000219334 Q8NFD4 153 aa14.85□□□□□ -0.03
SMPD3-201ENST00000219334 C16orf74Q96GX8 76 aa14.85□□□□□ -0.03
SMPD3-201ENST00000219334 V9GYV3 84 aa14.85□□□□□ -0.03
SMPD3-201ENST00000219334 HEATR5AQ86XA9 2040 aa14.85□□□□□ -0.03
SMPD3-201ENST00000219334 RBAKDNA6NC62 111 aa14.85□□□□□ -0.03
SMPD3-201ENST00000219334 PRR20EP86478 221 aa14.85□□□□□ -0.03
SMPD3-201ENST00000219334 PRR20CP86479 221 aa14.85□□□□□ -0.03
SMPD3-201ENST00000219334 PRR20DP86480 221 aa14.85□□□□□ -0.03
SMPD3-201ENST00000219334 PRR20BP86481 221 aa14.85□□□□□ -0.03
SMPD3-201ENST00000219334 PRR20AP86496 221 aa14.85□□□□□ -0.03
SMPD3-201ENST00000219334 C17orf77Q96MU5 243 aa14.85□□□□□ -0.03
SMPD3-201ENST00000219334 RSPO3Q9BXY4 272 aaPredicted RBP14.84□□□□□ -0.03
SMPD3-201ENST00000219334 SH2D6Q7Z4S9 175 aa14.84□□□□□ -0.03
SMPD3-201ENST00000219334 NPYP01303 97 aa14.84□□□□□ -0.03
SMPD3-201ENST00000219334 IGFBPL1Q8WX77 278 aa14.84□□□□□ -0.03
SMPD3-201ENST00000219334 PLCE1Q9P212 2302 aa14.84□□□□□ -0.03
SMPD3-201ENST00000219334 INAFM2P0DMQ5 153 aa14.84□□□□□ -0.03
SMPD3-201ENST00000219334 ZFAND6Q6FIF0 208 aa14.83□□□□□ -0.03
SMPD3-201ENST00000219334 SMIM27A0A1W2PRY6 76 aa14.83□□□□□ -0.04
SMPD3-201ENST00000219334 MYCNOSP40205 109 aa14.83□□□□□ -0.04
SMPD3-201ENST00000219334 TANC1Q9C0D5 1861 aa14.83□□□□□ -0.04
SMPD3-201ENST00000219334 HIVEP2P31629 2446 aa14.82□□□□□ -0.04
SMPD3-201ENST00000219334 SIGLEC8Q9NYZ4 499 aa14.82□□□□□ -0.04
SMPD3-201ENST00000219334 CLPSL1A2RUU4 121 aa14.82□□□□□ -0.04
SMPD3-201ENST00000219334 CRLF1O75462 422 aa14.82□□□□□ -0.04
SMPD3-201ENST00000219334 RNASE13Q5GAN3 156 aaKnown RBP14.82□□□□□ -0.04
SMPD3-201ENST00000219334 SPINK8P0C7L1 97 aa14.82□□□□□ -0.04
SMPD3-201ENST00000219334 GYPEP15421 78 aa14.81□□□□□ -0.04
SMPD3-201ENST00000219334 CD5LO43866 347 aa14.81□□□□□ -0.04
SMPD3-201ENST00000219334 C11orf52Q96A22 123 aa14.81□□□□□ -0.04
SMPD3-201ENST00000219334 TRAV13-2A0A0B4J235 113 aa14.81□□□□□ -0.04
SMPD3-201ENST00000219334 PLA2G5P39877 138 aa14.81□□□□□ -0.04
SMPD3-201ENST00000219334 CUL9Q8IWT3 2517 aa14.81□□□□□ -0.04
SMPD3-201ENST00000219334 F8VRH5 84 aa14.81□□□□□ -0.04
SMPD3-201ENST00000219334 RNF138Q8WVD3 245 aa14.8□□□□□ -0.04
SMPD3-201ENST00000219334 LTAP01374 205 aa14.8□□□□□ -0.04
SMPD3-201ENST00000219334 ATP6V0E2Q8NHE4 81 aa14.8□□□□□ -0.04
SMPD3-201ENST00000219334 ADCYAP1P18509 176 aa14.8□□□□□ -0.04
SMPD3-201ENST00000219334 C5orf56Q8N8D9 126 aa14.8□□□□□ -0.04
SMPD3-201ENST00000219334 MRPL35Q9NZE8 188 aaKnown RBP14.8□□□□□ -0.04
SMPD3-201ENST00000219334 SPG11Q96JI7 2443 aa14.79□□□□□ -0.04
SMPD3-201ENST00000219334 IGHV4OR15-8A0A075B7B6 117 aa14.79□□□□□ -0.04
SMPD3-201ENST00000219334 A0A087WW49 117 aa14.79□□□□□ -0.04
SMPD3-201ENST00000219334 C9JQL5 133 aa14.79□□□□□ -0.04
SMPD3-201ENST00000219334 CFHR4Q92496 578 aa14.79□□□□□ -0.04
SMPD3-201ENST00000219334 IGLV11-55A0A075B6I3 123 aa14.79□□□□□ -0.04
SMPD3-201ENST00000219334 BUB3O43684 328 aa14.79□□□□□ -0.04
SMPD3-201ENST00000219334 Q8N9W7 124 aa14.79□□□□□ -0.04
SMPD3-201ENST00000219334 SMAD5-AS1Q9Y6J3 95 aa14.79□□□□□ -0.04
SMPD3-201ENST00000219334 ADAMTSL5Q6ZMM2 481 aa14.78□□□□□ -0.04
SMPD3-201ENST00000219334 MED13Q9UHV7 2174 aa14.78□□□□□ -0.04
SMPD3-201ENST00000219334 J3QQQ9 107 aa14.78□□□□□ -0.04
SMPD3-201ENST00000219334 LGALS9BQ3B8N2 356 aa14.78□□□□□ -0.04
SMPD3-201ENST00000219334 LGALS9CQ6DKI2 356 aa14.78□□□□□ -0.04
SMPD3-201ENST00000219334 PYY3Q5JQD4 70 aa14.78□□□□□ -0.04
SMPD3-201ENST00000219334 HELZP42694 1942 aaKnown RBP14.77□□□□□ -0.04
SMPD3-201ENST00000219334 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.77□□□□□ -0.04
SMPD3-201ENST00000219334 IGKV2-29A2NJV5 120 aaPredicted RBP14.77□□□□□ -0.04
SMPD3-201ENST00000219334 EGR2P11161 476 aaPredicted RBP14.77□□□□□ -0.04
SMPD3-201ENST00000219334 FBXL19-AS1Q494R0 122 aa14.77□□□□□ -0.04
SMPD3-201ENST00000219334 UBL5Q9BZL1 73 aa14.77□□□□□ -0.04
SMPD3-201ENST00000219334 KLK5Q9Y337 293 aaPredicted RBP14.77□□□□□ -0.04
SMPD3-201ENST00000219334 NOTCH4Q99466 2003 aa14.77□□□□□ -0.04
SMPD3-201ENST00000219334 I3L2K1 104 aa14.77□□□□□ -0.05
SMPD3-201ENST00000219334 TRBV20-1A0A075B6N2 111 aa14.77□□□□□ -0.05
SMPD3-201ENST00000219334 K7EIM0 57 aa14.77□□□□□ -0.05
SMPD3-201ENST00000219334 DSCR8Q96T75 97 aa14.77□□□□□ -0.05
SMPD3-201ENST00000219334 A0A1W2PNU3 283 aaPredicted RBP14.76□□□□□ -0.05
SMPD3-201ENST00000219334 SPRY4Q9C004 299 aa14.76□□□□□ -0.05
SMPD3-201ENST00000219334 F8W735 103 aaPredicted RBP14.76□□□□□ -0.05
SMPD3-201ENST00000219334 SEM1Q6ZVN7 128 aa14.76□□□□□ -0.05
SMPD3-201ENST00000219334 CTSGP08311 255 aa14.76□□□□□ -0.05
SMPD3-201ENST00000219334 CAMK2N2Q96S95 79 aa14.76□□□□□ -0.05
SMPD3-201ENST00000219334 TSC2P49815 1807 aa14.76□□□□□ -0.05
SMPD3-201ENST00000219334 RPL18AQ02543 176 aaKnown RBP14.76□□□□□ -0.05
SMPD3-201ENST00000219334 C2orf70A6NJV1 201 aa14.75□□□□□ -0.05
SMPD3-201ENST00000219334 ZFP36P26651 326 aaKnown RBP14.75□□□□□ -0.05
SMPD3-201ENST00000219334 HAMPP81172 84 aa14.75□□□□□ -0.05
SMPD3-201ENST00000219334 MORN5Q5VZ52 161 aa14.75□□□□□ -0.05
SMPD3-201ENST00000219334 OTOGLQ3ZCN5 2332 aa14.75□□□□□ -0.05
SMPD3-201ENST00000219334 K7EQD1 137 aa14.75□□□□□ -0.05
SMPD3-201ENST00000219334 IGHV3-30P01768 117 aa14.75□□□□□ -0.05
SMPD3-201ENST00000219334 IGHV3-33P01772 117 aa14.75□□□□□ -0.05
SMPD3-201ENST00000219334 IGHV3-30-3P0DP02 117 aa14.75□□□□□ -0.05
SMPD3-201ENST00000219334 IGHV3-30-5P0DP03 117 aa14.75□□□□□ -0.05
SMPD3-201ENST00000219334 C16orf54Q6UWD8 224 aa14.75□□□□□ -0.05
SMPD3-201ENST00000219334 FGF23Q9GZV9 251 aaPredicted RBP14.75□□□□□ -0.05
SMPD3-201ENST00000219334 TMEM89A2RUT3 159 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms