RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 A0A1B0GV50 99 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 LINC00862A6NCI5 91 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 SMIM9A6NGZ8 99 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 KNCNA6PVL3 124 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 ZNF705FA8MVS1 300 aaPredicted RBP4.92□□□□□ -1.62
UPF3B-205ENST00000636792 EIF3GO75821 320 aaKnown RBP eCLIP4.92□□□□□ -1.62
UPF3B-205ENST00000636792 LTAP01374 205 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 IGLV2-11P01706 119 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 SNRPCP09234 159 aaKnown RBP4.92□□□□□ -1.62
UPF3B-205ENST00000636792 FRMD6-AS1P0C7T7 363 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 NHLRC4P0CG21 123 aaPredicted RBP4.92□□□□□ -1.62
UPF3B-205ENST00000636792 CT45A10P0DMU9 189 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 KIR3DS1Q14943 382 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 HAGHQ16775 308 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 GDF5OSQ5U4N7 250 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 Q6AWC8 147 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 PYGO2Q9BRQ0 406 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 AGPAT4-IT1Q9H0P7 198 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 RPH3ALQ9UNE2 315 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 PSG8Q9UQ74 426 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 GOLT1BQ9Y3E0 138 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 SELENOKQ9Y6D0 94 aa4.92□□□□□ -1.62
UPF3B-205ENST00000636792 PKD1L1Q8TDX9 2849 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 DNAH3Q8TD57 4116 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 TRAV21A0A0B4J279 112 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 TEX48A0A1B0GUV7 120 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 C7orf71A4D174 169 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 RBMY1BA6NDE4 496 aaKnown RBP4.91□□□□□ -1.62
UPF3B-205ENST00000636792 RBMY1EA6NEQ0 496 aaKnown RBP4.91□□□□□ -1.62
UPF3B-205ENST00000636792 PRAC2D3DTV9 90 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 F6UB75 175 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 H7BYZ3 331 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 CA1P00915 261 aaPredicted RBP4.91□□□□□ -1.62
UPF3B-205ENST00000636792 CXCL1P09341 107 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 RBMY1DP0C7P1 496 aaKnown RBP4.91□□□□□ -1.62
UPF3B-205ENST00000636792 RPL35P42766 123 aaKnown RBP4.91□□□□□ -1.62
UPF3B-205ENST00000636792 GNG5P63218 68 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 NDUFA5Q16718 116 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 SMUG1Q53HV7 270 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 IGFL4Q6B9Z1 124 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 ZNF705AQ6ZN79 300 aaPredicted RBP4.91□□□□□ -1.62
UPF3B-205ENST00000636792 TMEM183AQ8IXX5 376 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 ZFAND2AQ8N6M9 145 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 ASCL2Q99929 193 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 VGLL1Q99990 258 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 TM2D3Q9BRN9 247 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 NIPSNAP3BQ9BS92 247 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 MLST8Q9BVC4 326 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 SLC35B3Q9H1N7 401 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 PARLQ9H300 379 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 TREM1Q9NP99 234 aa4.91□□□□□ -1.62
UPF3B-205ENST00000636792 NBEAL1Q6ZS30 2694 aa4.9□□□□□ -1.62
UPF3B-205ENST00000636792 NOTCH1P46531 2555 aa4.9□□□□□ -1.62
UPF3B-205ENST00000636792 TMEM189A5PLL7 270 aa4.9□□□□□ -1.63
UPF3B-205ENST00000636792 CRXO43186 299 aaPredicted RBP4.9□□□□□ -1.63
UPF3B-205ENST00000636792 GPX1P07203 203 aa4.9□□□□□ -1.63
UPF3B-205ENST00000636792 PFN1P07737 140 aaKnown RBP4.9□□□□□ -1.63
UPF3B-205ENST00000636792 SRP19P09132 144 aaKnown RBP4.9□□□□□ -1.63
UPF3B-205ENST00000636792 ZNF705DP0CH99 300 aaPredicted RBP4.9□□□□□ -1.63
UPF3B-205ENST00000636792 ZNF705BP0CI00 300 aaPredicted RBP4.9□□□□□ -1.63
UPF3B-205ENST00000636792 MIFP14174 115 aa4.9□□□□□ -1.63
UPF3B-205ENST00000636792 GNG4P50150 75 aa4.9□□□□□ -1.63
UPF3B-205ENST00000636792 DEFA6Q01524 100 aa4.9□□□□□ -1.63
UPF3B-205ENST00000636792 PNRC1Q12796 327 aaPredicted RBP4.9□□□□□ -1.63
UPF3B-205ENST00000636792 SPINK13Q1W4C9 94 aa4.9□□□□□ -1.63
UPF3B-205ENST00000636792 TDRG1Q3Y452 100 aa4.9□□□□□ -1.63
UPF3B-205ENST00000636792 CSNK1G2-AS1Q8NCQ2 148 aa4.9□□□□□ -1.63
UPF3B-205ENST00000636792 RNF183Q96D59 192 aa4.9□□□□□ -1.63
UPF3B-205ENST00000636792 KCNS1Q96KK3 526 aa4.9□□□□□ -1.63
UPF3B-205ENST00000636792 C8orf49Q96NF6 230 aa4.9□□□□□ -1.63
UPF3B-205ENST00000636792 RCHY1Q96PM5 261 aa4.9□□□□□ -1.63
UPF3B-205ENST00000636792 ZMAT4Q9H898 229 aa4.9□□□□□ -1.63
UPF3B-205ENST00000636792 TP53TG3Q9ULZ0 132 aa4.9□□□□□ -1.63
UPF3B-205ENST00000636792 TRAV8-1A0A0A6YYK1 113 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 FABP5P3A8MUU1 101 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 M0R2Z0 102 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 PLA2G1BP04054 148 aaKnown RBP4.89□□□□□ -1.63
UPF3B-205ENST00000636792 GIG44P09565 113 aaPredicted RBP4.89□□□□□ -1.63
UPF3B-205ENST00000636792 RPL35AP18077 110 aaKnown RBP4.89□□□□□ -1.63
UPF3B-205ENST00000636792 ERCC8Q13216 396 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 ANXA2RQ3ZCQ2 193 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 CENPWQ5EE01 88 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 DEFB121Q5J5C9 76 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 SOHLH1Q5JUK2 328 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 IBA57Q5T440 356 aaKnown RBP4.89□□□□□ -1.63
UPF3B-205ENST00000636792 GFI1BQ5VTD9 330 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 ZNF493Q6ZR52 646 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 PRNTQ86SH4 94 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 BAGE2Q86Y30 109 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 Q8TAT8 98 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 RARRES2Q99969 163 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 SMIM7Q9BQ49 75 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 NDUFAF3Q9BU61 184 aa4.89□□□□□ -1.63
UPF3B-205ENST00000636792 C11orf68Q9H3H3 251 aaKnown RBP4.89□□□□□ -1.63
UPF3B-205ENST00000636792 TRBV20OR9-2A0A075B6H5 130 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 TRGV11A0A075B6L2 103 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 XKRY2A2RUG3 117 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 ZNF727A8MUV8 499 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 SPRY2O43597 315 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 ZNF324O75467 553 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms