RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 SMIM8Q96KF7 97 aa5.79□□□□□ -1.48
SMAD4-215ENST00000592911 SPXQ9BT56 116 aa5.79□□□□□ -1.48
SMAD4-215ENST00000592911 CCDC59Q9P031 241 aaKnown RBP5.79□□□□□ -1.48
SMAD4-215ENST00000592911 MGAT4CQ9UBM8 478 aa5.79□□□□□ -1.48
SMAD4-215ENST00000592911 IGHV1OR15-1A0A075B7D0 117 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 TRAV8-6A0A0B4J262 113 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 SMCO3A2RU48 225 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 LINC00862A6NCI5 91 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 PRAC2D3DTV9 90 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 GOSR2O14653 212 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 COX7A2P2O60397 106 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 HOXB5P09067 269 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 KRTAP10-4P60372 401 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-215ENST00000592911 VBP1P61758 197 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 HAMPP81172 84 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 TOR2AQ5JU69 321 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 TMEM14EPQ6UXP3 125 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 C9orf47Q6ZRZ4 202 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 LINC00518Q8N0U6 118 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 C12orf45Q8N5I9 185 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-215ENST00000592911 OR10P1Q8NGE3 313 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 TMEM37Q8WXS4 190 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 C8orf49Q96NF6 230 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 PFDN5Q99471 154 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 SLC25A21Q9BQT8 299 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-215ENST00000592911 CCDC32Q9BV29 185 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 SLC25A31Q9H0C2 315 aa5.78□□□□□ -1.48
SMAD4-215ENST00000592911 TRAV8-3A0A0A6YYJ7 113 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 TRAV4A0A0B4J268 109 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 FABP12A6NFH5 140 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 SLC17A3O00476 420 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 TSC22D2O75157 780 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 IGLV2-11P01706 119 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 GPX1P07203 203 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 PFN1P07737 140 aaKnown RBP5.77□□□□□ -1.49
SMAD4-215ENST00000592911 HIST1H1EP10412 219 aaKnown RBP5.77□□□□□ -1.49
SMAD4-215ENST00000592911 IL7P13232 177 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 GYPEP15421 78 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 TNFSF8P32971 234 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 AP3S2P59780 193 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 RAB31Q13636 194 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 OPCMLQ14982 345 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 C10orf113Q5VZT2 155 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 Q6ZRG5 221 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 ARL6IP6Q8N6S5 226 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 OR1L4Q8NGR5 311 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 CHAC1Q9BUX1 264 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 PARD6GQ9BYG4 376 aaPredicted RBP5.77□□□□□ -1.49
SMAD4-215ENST00000592911 SRRQ9GZT4 340 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 PSENENQ9NZ42 101 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 PKHD1L1Q86WI1 4243 aa5.77□□□□□ -1.49
SMAD4-215ENST00000592911 E5RGE8 158 aa5.76□□□□□ -1.49
SMAD4-215ENST00000592911 SEC11BP0C7V7 166 aa5.76□□□□□ -1.49
SMAD4-215ENST00000592911 SCXQ7RTU7 201 aa5.76□□□□□ -1.49
SMAD4-215ENST00000592911 TCTE3Q8IZS6 198 aa5.76□□□□□ -1.49
SMAD4-215ENST00000592911 BLNKQ8WV28 456 aa5.76□□□□□ -1.49
SMAD4-215ENST00000592911 DNAJC4Q9NNZ3 241 aa5.76□□□□□ -1.49
SMAD4-215ENST00000592911 MCUBQ9NWR8 336 aa5.76□□□□□ -1.49
SMAD4-215ENST00000592911 TMEM14CQ9P0S9 112 aa5.76□□□□□ -1.49
SMAD4-215ENST00000592911 TRGV11A0A075B6L2 103 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 TRBV19A0A075B6N1 114 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 H3BP45 60 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 H3BQ15 152 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 J3KRW8 73 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 AGPAT2O15120 278 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 RGS5O15539 181 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 GATCO43716 136 aaKnown RBP5.75□□□□□ -1.49
SMAD4-215ENST00000592911 SNAPINO95295 136 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 SFT2D2O95562 160 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 IGHV3-53P01767 116 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 PPT1P50897 306 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 IFITM3Q01628 133 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 BTN1A1Q13410 526 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 IL18Q14116 193 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 CTF1Q16619 201 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 TMEM78Q5T7P6 136 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 LELP1Q5T871 98 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 ZFAND2AQ8N6M9 145 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 Q8N976 141 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 DYNC2LI1Q8TCX1 351 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 MIXL1Q9H2W2 232 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 AAMDCQ9H7C9 122 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 MRPL16Q9NX20 251 aaKnown RBP5.75□□□□□ -1.49
SMAD4-215ENST00000592911 LENEPQ9Y5L5 61 aa5.75□□□□□ -1.49
SMAD4-215ENST00000592911 RBAKDNA6NC62 111 aa5.74□□□□□ -1.49
SMAD4-215ENST00000592911 CTDSP2O14595 271 aa5.74□□□□□ -1.49
SMAD4-215ENST00000592911 RNASE4P34096 147 aaKnown RBP5.74□□□□□ -1.49
SMAD4-215ENST00000592911 NKX2-5P52952 324 aaPredicted RBP5.74□□□□□ -1.49
SMAD4-215ENST00000592911 FLI1Q01543 452 aaPredicted RBP5.74□□□□□ -1.49
SMAD4-215ENST00000592911 SLC38A11Q08AI6 406 aa5.74□□□□□ -1.49
SMAD4-215ENST00000592911 MCFD2Q8NI22 146 aa5.74□□□□□ -1.49
SMAD4-215ENST00000592911 RMI2Q96E14 147 aa5.74□□□□□ -1.49
SMAD4-215ENST00000592911 DIRAS2Q96HU8 199 aa5.74□□□□□ -1.49
SMAD4-215ENST00000592911 NAA50Q9GZZ1 169 aaKnown RBP5.74□□□□□ -1.49
SMAD4-215ENST00000592911 AGPAT4-IT1Q9H0P7 198 aa5.74□□□□□ -1.49
SMAD4-215ENST00000592911 ZNF492Q9P255 531 aa5.74□□□□□ -1.49
SMAD4-215ENST00000592911 ZNF266Q14584 549 aa5.73□□□□□ -1.49
SMAD4-215ENST00000592911 SPANXN2Q5MJ10 180 aa5.73□□□□□ -1.49
SMAD4-215ENST00000592911 Q6AWC8 147 aa5.73□□□□□ -1.49
SMAD4-215ENST00000592911 ATP6V0E2Q8NHE4 81 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms