RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 NBEAP1P0C6P0 100 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 NTF3P20783 257 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 HINT1P49773 126 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 TCL1AP56279 114 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 HBBP68871 147 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 COTL1Q14019 142 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 EDDM3AQ14507 147 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 LTC4SQ16873 150 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 PSMG4Q5JS54 123 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 TIMM23BQ5SRD1 257 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 BVES-AS1Q5T3Y7 98 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 LINC00242Q5T6M2 205 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 TEX36Q5VZQ5 186 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 C10orf113Q5VZT2 155 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 LCN12Q6JVE5 192 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 SLC25A34Q6PIV7 304 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 UNQ5815/PRO19632Q6UWF5 114 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 TCF24Q7RTU0 167 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 ZNF491Q8N8L2 437 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 VSTM2AQ8TAG5 236 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 PIFOQ8TCI5 191 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 FMC1Q96HJ9 113 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 TRGV9Q99603 122 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 TMEM191AQ9H0A3 160 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 RPP21Q9H633 154 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 ZNF430Q9H8G1 570 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 ZNF355PQ9NSJ1 428 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 MAP1BP46821 2468 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 ESPL1Q14674 2120 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 DOCK11Q5JSL3 2073 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 LOC102724200A0A096LPH7 203 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 IGHV1-24A0A0C4DH33 117 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 IGHV3-64DA0A0J9YX35 117 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 hADV38S2A0JD32 116 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 PGPA6NDG6 321 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 HIGD1CA8MV81 97 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 E7EUB6 86 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 E9PLD3 99 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 CORTO00230 105 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 COX7A2P2O60397 106 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 TSPAN13O95857 204 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 MOSP00540 346 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 IGLV2-23P01705 113 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 APOA2P02652 100 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 IGLC1P0CG04 106 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 SAA1P0DJI8 122 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 COX8AP10176 69 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 COL8A2P25067 703 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 LGALS7P47929 136 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 ZNF137PP52743 207 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 SEC11AP67812 179 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 UBE2L3P68036 154 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 SLC35B1P78383 322 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 HIST1H1AQ02539 215 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 WT1-ASQ06250 92 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 MPV17L2Q567V2 206 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 Q56UQ5 140 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 UTF1Q5T230 341 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 LINC01545Q5VT33 79 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 LINC00322Q6ZN03 302 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 ZNF493Q6ZR52 646 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 BHLHA15Q7RTS1 189 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 PDPNQ86YL7 162 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 LYPD1Q8N2G4 141 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 C5orf17Q8NAS9 161 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 OR10W1Q8NGF6 305 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 OR4C13Q8NGP0 309 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 OR1N2Q8NGR9 330 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 OR10X1Q8NGY0 326 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 GTSF1Q8WW33 167 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 H1FXQ92522 213 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 FLYWCH2Q96CP2 140 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 C9orf85Q96MD7 179 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 GAFA1Q96PS6 74 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 MAP1LC3CQ9BXW4 147 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 CST9LQ9H4G1 147 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 TMEM14CQ9P0S9 112 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 HSPB8Q9UJY1 196 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 RNF24Q9Y225 148 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 LINC00312Q9Y6C7 94 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 MED12Q93074 2177 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 TRIOO75962 3097 aa2.82□□□□□ -1.96
SMCHD1-208ENST00000583344 TET2Q6N021 2002 aaPredicted RBP2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 MYO15AQ9UKN7 3530 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 ARID1AO14497 2285 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 PTPRZ1P23471 2315 aaPredicted RBP2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 FAM186AA6NE01 2351 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 GVINP1Q7Z2Y8 2422 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 ACACBO00763 2458 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 ANKRD11Q6UB99 2663 aaPredicted RBP2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 GCN1Q92616 2671 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 DMXL1Q9Y485 3027 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 IGHV3OR15-7A0A075B7D8 119 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 A0A1W2PRD5 423 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 H3BRM9 83 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 K7EM74 188 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 CDX4O14627 284 aaPredicted RBP2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 FCN3O75636 299 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 P01737 135 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms