RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PYURFQ96I23 114 aa2.06□□□□□ -2.08
HMGB1P6-201ENST00000569046 THTPAQ9BU02 230 aa2.06□□□□□ -2.08
HMGB1P6-201ENST00000569046 GTSF1LQ9H1H1 148 aa2.06□□□□□ -2.08
HMGB1P6-201ENST00000569046 MED28Q9H204 178 aa2.06□□□□□ -2.08
HMGB1P6-201ENST00000569046 ZNF430Q9H8G1 570 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P6-201ENST00000569046 SAR1AQ9NR31 198 aa2.06□□□□□ -2.08
HMGB1P6-201ENST00000569046 CARHSP1Q9Y2V2 147 aaKnown RBP2.06□□□□□ -2.08
HMGB1P6-201ENST00000569046 WASHC3Q9Y3C0 194 aa2.06□□□□□ -2.08
HMGB1P6-201ENST00000569046 AMMECR1Q9Y4X0 333 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P6-201ENST00000569046 FAT2Q9NYQ8 4349 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 TMEM223A0PJW6 202 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 NUPR2A6NF83 97 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 A8MWL6 223 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 OOSP1A8MZH6 123 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 IGLL5B9A064 214 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 M0R381 172 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 ZNF207O43670 478 aaKnown RBP2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 EDF1O60869 148 aaKnown RBP2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 IFNGP01579 166 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 TRGV3P03979 118 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 INAFM2P0DMQ5 153 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 FGF6P10767 208 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 COX4I1P13073 169 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 CCL1P22362 96 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 RBP2P50120 134 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 DEFA3P59666 94 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 ZNF816Q0VGE8 651 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 CDK5R1Q15078 307 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 DEFB135Q30KP9 77 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 LGALS9CQ6DKI2 356 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 MORN3Q6PF18 240 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 UNQ5815/PRO19632Q6UWF5 114 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 TMEM144Q7Z5S9 345 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 BAP18Q8IXM2 172 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 LHFPL5Q8TAF8 219 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 ARL11Q969Q4 196 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 GALMQ96C23 342 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 ADAT3Q96EY9 351 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 ABHD14BQ96IU4 210 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 RNASE7Q9H1E1 156 aaKnown RBP2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 CMC2Q9NRP2 79 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 KCNIP2Q9NS61 270 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 SS18L2Q9UHA2 77 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 ENOPH1Q9UHY7 261 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 KLK5Q9Y337 293 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 S4R3C0 116 aa2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 DYNC1H1Q14204 4646 aaKnown RBP2.05□□□□□ -2.08
HMGB1P6-201ENST00000569046 IGLV2-18A0A075B6J9 118 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 A0A096LNJ9 63 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 FUOMA2VDF0 154 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 BBIP1A8MTZ0 92 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 PPP5D1E7EU14 171 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 PDE6DO43924 150 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 OR7C1O76099 320 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 CDRT1O95170 752 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 CYB5AP00167 134 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 IFNA21P01568 189 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 PRH1P02810 166 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 DDTP30046 118 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 INPP1P49441 399 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 SMIM11AP58511 58 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 LINC00313P59037 77 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 PLGLAQ15195 96 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 DEFB116Q30KQ4 102 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 PIGYQ3MUY2 71 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 RPL13AP3Q6NVV1 102 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 LPCAT3Q6P1A2 487 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 ZNF322Q6U7Q0 402 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 CYB561D1Q8N8Q1 229 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 OR51A4Q8NGJ6 313 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 OR51A2Q8NGJ7 313 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 OR51T1Q8NGJ9 327 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 OR4K15Q8NH41 348 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 MCFD2Q8NI22 146 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 GRPEL2Q8TAA5 225 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 NARS2Q96I59 477 aaKnown RBP2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 NDFIP1Q9BT67 221 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 SCRT1Q9BWW7 348 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 BATF3Q9NR55 127 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 TVP23BQ9NYZ1 205 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 APLNQ9ULZ1 77 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 ANAPC10Q9UM13 185 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 NUBP2Q9Y5Y2 271 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 R4GMQ9 66 aa2.04□□□□□ -2.08
HMGB1P6-201ENST00000569046 DNAH6Q9C0G6 4158 aa2.03□□□□□ -2.08
HMGB1P6-201ENST00000569046 LOC107986453A0A1B0GWG9 222 aa2.03□□□□□ -2.08
HMGB1P6-201ENST00000569046 ZNF670-ZNF695F2Z2N8 137 aa2.03□□□□□ -2.08
HMGB1P6-201ENST00000569046 C15orf65H3BRN8 121 aa2.03□□□□□ -2.08
HMGB1P6-201ENST00000569046 RBFOX2O43251 390 aaKnown RBP eCLIP2.03□□□□□ -2.08
HMGB1P6-201ENST00000569046 ATG12O94817 140 aa2.03□□□□□ -2.08
HMGB1P6-201ENST00000569046 S1PR2O95136 353 aa2.03□□□□□ -2.08
HMGB1P6-201ENST00000569046 HRASP01112 189 aa2.03□□□□□ -2.08
HMGB1P6-201ENST00000569046 KRASP01116 189 aa2.03□□□□□ -2.08
HMGB1P6-201ENST00000569046 IFNA1P01562 189 aa2.03□□□□□ -2.08
HMGB1P6-201ENST00000569046 HLA-DRB1P01911 266 aa2.03□□□□□ -2.08
HMGB1P6-201ENST00000569046 OR5G3P0C626 314 aa2.03□□□□□ -2.08
HMGB1P6-201ENST00000569046 OPRK1P41145 380 aa2.03□□□□□ -2.08
HMGB1P6-201ENST00000569046 DAPP51397 102 aa2.03□□□□□ -2.08
HMGB1P6-201ENST00000569046 CDC42P60953 191 aa2.03□□□□□ -2.08
HMGB1P6-201ENST00000569046 DEFB114Q30KQ6 69 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms