RNA–Protein interactions for RNA: ENST00000568139.5

CLK3-221, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-221ENST00000568139 GYPEP15421 78 aa11.84□□□□□ -0.51
CLK3-221ENST00000568139 SULT1A1P50225 295 aa11.84□□□□□ -0.51
CLK3-221ENST00000568139 HAMPP81172 84 aa11.84□□□□□ -0.51
CLK3-221ENST00000568139 FAM122CQ6P4D5 195 aa11.84□□□□□ -0.51
CLK3-221ENST00000568139 C10orf126Q8N4M7 172 aa11.84□□□□□ -0.51
CLK3-221ENST00000568139 SLC25A2Q9BXI2 301 aa11.84□□□□□ -0.51
CLK3-221ENST00000568139 LRCOL1A6NCL2 159 aa11.83□□□□□ -0.52
CLK3-221ENST00000568139 CRYGDP07320 174 aa11.83□□□□□ -0.52
CLK3-221ENST00000568139 NTN5Q8WTR8 489 aaPredicted RBP11.83□□□□□ -0.52
CLK3-221ENST00000568139 PCNPQ8WW12 178 aaKnown RBP11.83□□□□□ -0.52
CLK3-221ENST00000568139 RASL10AQ92737 203 aa11.83□□□□□ -0.52
CLK3-221ENST00000568139 LYRM2Q9NU23 88 aaPredicted RBP11.83□□□□□ -0.52
CLK3-221ENST00000568139 IGLV5-52A0A0A0MRZ9 124 aa11.82□□□□□ -0.52
CLK3-221ENST00000568139 FAM25EA8MYX2 175 aa11.82□□□□□ -0.52
CLK3-221ENST00000568139 NBEAP1P0C6P0 100 aa11.82□□□□□ -0.52
CLK3-221ENST00000568139 PVALBP20472 110 aaPredicted RBP11.82□□□□□ -0.52
CLK3-221ENST00000568139 FGF7P21781 194 aa11.82□□□□□ -0.52
CLK3-221ENST00000568139 ZNF138P52744 262 aa11.82□□□□□ -0.52
CLK3-221ENST00000568139 GCSAMLQ5JQS6 135 aa11.82□□□□□ -0.52
CLK3-221ENST00000568139 TMEM252Q8N6L7 170 aa11.82□□□□□ -0.52
CLK3-221ENST00000568139 FAM167A-AS1Q96KT0 104 aa11.82□□□□□ -0.52
CLK3-221ENST00000568139 TXNDC17Q9BRA2 123 aa11.82□□□□□ -0.52
CLK3-221ENST00000568139 IGSF23A1L1A6 192 aa11.81□□□□□ -0.52
CLK3-221ENST00000568139 C5orf51A6NDU8 294 aa11.81□□□□□ -0.52
CLK3-221ENST00000568139 HBG1P69891 147 aa11.81□□□□□ -0.52
CLK3-221ENST00000568139 HBG2P69892 147 aa11.81□□□□□ -0.52
CLK3-221ENST00000568139 ZNF266Q14584 549 aa11.81□□□□□ -0.52
CLK3-221ENST00000568139 ATP6V1FQ16864 119 aa11.81□□□□□ -0.52
CLK3-221ENST00000568139 C2orf50Q96LR7 162 aa11.81□□□□□ -0.52
CLK3-221ENST00000568139 SPXQ9BT56 116 aa11.81□□□□□ -0.52
CLK3-221ENST00000568139 GPN1Q9HCN4 374 aaPredicted RBP11.81□□□□□ -0.52
CLK3-221ENST00000568139 CCDC160A6NGH7 325 aa11.8□□□□□ -0.52
CLK3-221ENST00000568139 IL15RAQ13261 267 aa11.8□□□□□ -0.52
CLK3-221ENST00000568139 MUC21Q5SSG8 566 aa11.8□□□□□ -0.52
CLK3-221ENST00000568139 Q8TAT8 98 aa11.8□□□□□ -0.52
CLK3-221ENST00000568139 NPCDR1Q9BY65 106 aa11.8□□□□□ -0.52
CLK3-221ENST00000568139 OR51M1Q9H341 326 aa11.8□□□□□ -0.52
CLK3-221ENST00000568139 RBAKDNA6NC62 111 aa11.79□□□□□ -0.52
CLK3-221ENST00000568139 C9JCJ5 164 aa11.79□□□□□ -0.52
CLK3-221ENST00000568139 J3QL48 77 aa11.79□□□□□ -0.52
CLK3-221ENST00000568139 Q6AWC8 147 aa11.79□□□□□ -0.52
CLK3-221ENST00000568139 MIR17HGQ75NE6 70 aa11.79□□□□□ -0.52
CLK3-221ENST00000568139 STX12Q86Y82 276 aa11.79□□□□□ -0.52
CLK3-221ENST00000568139 TRAV4A0A0B4J268 109 aa11.78□□□□□ -0.52
CLK3-221ENST00000568139 IGHV3-38A0A0C4DH36 116 aa11.78□□□□□ -0.52
CLK3-221ENST00000568139 PSCAO43653 123 aa11.78□□□□□ -0.52
CLK3-221ENST00000568139 IL7P13232 177 aa11.78□□□□□ -0.52
CLK3-221ENST00000568139 TIRAPP58753 221 aa11.78□□□□□ -0.52
CLK3-221ENST00000568139 SH2D6Q7Z4S9 175 aa11.78□□□□□ -0.52
CLK3-221ENST00000568139 FXYD5Q96DB9 178 aa11.78□□□□□ -0.52
CLK3-221ENST00000568139 RBM38Q9H0Z9 239 aaKnown RBP11.78□□□□□ -0.52
CLK3-221ENST00000568139 FAM30AQ9NZY2 134 aa11.78□□□□□ -0.52
CLK3-221ENST00000568139 TRGV11A0A075B6L2 103 aa11.77□□□□□ -0.53
CLK3-221ENST00000568139 IBA57-AS1B1ANH7 110 aa11.77□□□□□ -0.53
CLK3-221ENST00000568139 PLA2G10O15496 165 aa11.77□□□□□ -0.53
CLK3-221ENST00000568139 S100A10P60903 97 aa11.77□□□□□ -0.53
CLK3-221ENST00000568139 RAB32Q13637 225 aa11.77□□□□□ -0.53
CLK3-221ENST00000568139 TMEM183BQ1AE95 376 aa11.77□□□□□ -0.53
CLK3-221ENST00000568139 LINC01556Q5JQF7 62 aa11.77□□□□□ -0.53
CLK3-221ENST00000568139 TMEM183AQ8IXX5 376 aa11.77□□□□□ -0.53
CLK3-221ENST00000568139 Q8N814 137 aa11.77□□□□□ -0.53
CLK3-221ENST00000568139 PHYHIPLQ96FC7 376 aa11.77□□□□□ -0.53
CLK3-221ENST00000568139 SEC22CQ9BRL7 303 aa11.77□□□□□ -0.53
CLK3-221ENST00000568139 PAXXQ9BUH6 204 aa11.77□□□□□ -0.53
CLK3-221ENST00000568139 SLC25A31Q9H0C2 315 aa11.77□□□□□ -0.53
CLK3-221ENST00000568139 LOC100131303A0A0U1RQF7 123 aa11.76□□□□□ -0.53
CLK3-221ENST00000568139 C1QBP02746 253 aa11.76□□□□□ -0.53
CLK3-221ENST00000568139 TCRBP04435 133 aa11.76□□□□□ -0.53
CLK3-221ENST00000568139 OR10J4P0C629 311 aa11.76□□□□□ -0.53
CLK3-221ENST00000568139 FAM159AQ6UWV7 190 aa11.76□□□□□ -0.53
CLK3-221ENST00000568139 LENEPQ9Y5L5 61 aa11.76□□□□□ -0.53
CLK3-221ENST00000568139 CSN1S1P47710 185 aa11.75□□□□□ -0.53
CLK3-221ENST00000568139 TDRG1Q3Y452 100 aa11.75□□□□□ -0.53
CLK3-221ENST00000568139 OR4C5Q8NGB2 326 aa11.75□□□□□ -0.53
CLK3-221ENST00000568139 TRAV6A0A075B6T7 132 aa11.74□□□□□ -0.53
CLK3-221ENST00000568139 M0R2P5 195 aa11.74□□□□□ -0.53
CLK3-221ENST00000568139 LYRM1O43325 122 aa11.74□□□□□ -0.53
CLK3-221ENST00000568139 THAP6Q8TBB0 222 aa11.74□□□□□ -0.53
CLK3-221ENST00000568139 KRTAP29-1A8MX34 341 aaPredicted RBP11.73□□□□□ -0.53
CLK3-221ENST00000568139 GATA1P15976 413 aaPredicted RBP11.73□□□□□ -0.53
CLK3-221ENST00000568139 RANP62826 216 aaKnown RBP11.73□□□□□ -0.53
CLK3-221ENST00000568139 NHLH2Q02577 135 aa11.73□□□□□ -0.53
CLK3-221ENST00000568139 BOLA1Q9Y3E2 137 aa11.73□□□□□ -0.53
CLK3-221ENST00000568139 DIRC3C9JPN6 131 aa11.72□□□□□ -0.53
CLK3-221ENST00000568139 GNRH2O43555 120 aa11.72□□□□□ -0.53
CLK3-221ENST00000568139 PPT1P50897 306 aa11.72□□□□□ -0.53
CLK3-221ENST00000568139 NHLRC2Q8NBF2 726 aa11.72□□□□□ -0.53
CLK3-221ENST00000568139 TMED6Q8WW62 240 aa11.72□□□□□ -0.53
CLK3-221ENST00000568139 IGHV3-16A0A0C4DH30 117 aa11.71□□□□□ -0.53
CLK3-221ENST00000568139 PLA2G1BP04054 148 aaKnown RBP11.71□□□□□ -0.53
CLK3-221ENST00000568139 Q6ZSA8 131 aa11.71□□□□□ -0.53
CLK3-221ENST00000568139 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.53
CLK3-221ENST00000568139 Q9HAA7 133 aa11.71□□□□□ -0.53
CLK3-221ENST00000568139 NUDT15Q9NV35 164 aa11.71□□□□□ -0.53
CLK3-221ENST00000568139 TRAV8-6A0A0B4J262 113 aa11.7□□□□□ -0.54
CLK3-221ENST00000568139 OR7C2O60412 319 aa11.7□□□□□ -0.54
CLK3-221ENST00000568139 PFN1P07737 140 aaKnown RBP11.7□□□□□ -0.54
CLK3-221ENST00000568139 WDR61Q9GZS3 305 aaKnown RBP11.7□□□□□ -0.54
CLK3-221ENST00000568139 KCNIP2Q9NS61 270 aa11.7□□□□□ -0.54
CLK3-221ENST00000568139 NAGKQ9UJ70 344 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms