RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 ESRGQ1W209 222 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 Q6ZRG5 221 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 C9orf47Q6ZRZ4 202 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 Q6ZTI0 123 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 SSX7Q7RTT5 188 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 EXOC3-AS1Q8N2X6 119 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 OR1L4Q8NGR5 311 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 SFT2D1Q8WV19 159 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 FXYD5Q96DB9 178 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 MRPL53Q96EL3 112 aaKnown RBP3.83□□□□□ -1.8
SMAD3-209ENST00000558894 ZNF503Q96F45 646 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 PFDN5Q99471 154 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 UPK3BQ9BT76 320 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 NPCDR1Q9BY65 106 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 OR5AC2Q9NZP5 309 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 RNF24Q9Y225 148 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 SRRM2Q9UQ35 2752 aaKnown RBP3.83□□□□□ -1.8
SMAD3-209ENST00000558894 HMCN2Q8NDA2 5059 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 GAGE12BA1L429 117 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 SPINK4O60575 86 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 GAGE7O76087 117 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 SIX6O95475 246 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 GAGE12FP0CL80 117 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 GAGE12GP0CL81 117 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 GAGE12IP0CL82 117 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 HIST1H1EP10412 219 aaKnown RBP3.82□□□□□ -1.8
SMAD3-209ENST00000558894 H2BFSP57053 126 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 S100A10P60903 97 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 BAXQ07812 192 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 GAGE1Q13065 139 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 RAB31Q13636 194 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 PDE6HQ13956 83 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 ATP6V1FQ16864 119 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 MAJINQ3KP22 176 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 Q5BKY6 102 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 MIR17HGQ75NE6 70 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 S100A7AQ86SG5 101 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 C6orf223Q8N319 242 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 ZFAND2AQ8N6M9 145 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 OR5C1Q8NGR4 320 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 OR10J6PQ8NGY7 276 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 RXFP4Q8TDU9 374 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 VGLL1Q99990 258 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 PYGO2Q9BRQ0 406 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 TMPRSS5Q9H3S3 457 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 TP53TG3Q9ULZ0 132 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 MUC2Q02817 5179 aa3.82□□□□□ -1.8
SMAD3-209ENST00000558894 A0A096LPF7 62 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 A0A0J9YY99 117 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 FAM240BA0A1B0GVZ2 78 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 C7orf71A4D174 169 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 J3KRW8 73 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 MPDU1O75352 247 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 SCO1O75880 301 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 SLC25A5P05141 298 aaKnown RBP3.81□□□□□ -1.8
SMAD3-209ENST00000558894 NMBP08949 121 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 PVALBP20472 110 aaPredicted RBP3.81□□□□□ -1.8
SMAD3-209ENST00000558894 FGF7P21781 194 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 LEPP41159 167 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 CCL18P55774 89 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 OR5I1Q13606 314 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 ANXA2RQ3ZCQ2 193 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 SOHLH1Q5JUK2 328 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 Q6ZRN7 208 aaPredicted RBP3.81□□□□□ -1.8
SMAD3-209ENST00000558894 MRPL52Q86TS9 123 aaKnown RBP3.81□□□□□ -1.8
SMAD3-209ENST00000558894 THAP6Q8TBB0 222 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 RAB24Q969Q5 203 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 GNPNAT1Q96EK6 184 aaPredicted RBP3.81□□□□□ -1.8
SMAD3-209ENST00000558894 PHYHIPLQ96FC7 376 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 LINC00477Q96M19 166 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 ATG101Q9BSB4 218 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 NMES1Q9C002 83 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 WDR61Q9GZS3 305 aaKnown RBP3.81□□□□□ -1.8
SMAD3-209ENST00000558894 Q9H3A6 140 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 Q9H8V8 135 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 GPN1Q9HCN4 374 aaPredicted RBP3.81□□□□□ -1.8
SMAD3-209ENST00000558894 NIT2Q9NQR4 276 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 ZNF492Q9P255 531 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 KLF12Q9Y4X4 402 aa3.81□□□□□ -1.8
SMAD3-209ENST00000558894 IGKV2-40A0A087WW87 121 aaPredicted RBP3.8□□□□□ -1.8
SMAD3-209ENST00000558894 SNURFLB1AK76 121 aa3.8□□□□□ -1.8
SMAD3-209ENST00000558894 E5RGE8 158 aa3.8□□□□□ -1.8
SMAD3-209ENST00000558894 TCAPO15273 167 aa3.8□□□□□ -1.8
SMAD3-209ENST00000558894 CDK2AP2O75956 126 aa3.8□□□□□ -1.8
SMAD3-209ENST00000558894 IGKV2D-40P01614 121 aaPredicted RBP3.8□□□□□ -1.8
SMAD3-209ENST00000558894 RLN2P04090 185 aa3.8□□□□□ -1.8
SMAD3-209ENST00000558894 NBEAP1P0C6P0 100 aa3.8□□□□□ -1.8
SMAD3-209ENST00000558894 RNASE4P34096 147 aaKnown RBP3.8□□□□□ -1.8
SMAD3-209ENST00000558894 TCL1AP56279 114 aa3.8□□□□□ -1.8
SMAD3-209ENST00000558894 KRTAP10-2P60368 255 aa3.8□□□□□ -1.8
SMAD3-209ENST00000558894 HBG1P69891 147 aa3.8□□□□□ -1.8
SMAD3-209ENST00000558894 HBG2P69892 147 aa3.8□□□□□ -1.8
SMAD3-209ENST00000558894 FHL2Q14192 279 aa3.8□□□□□ -1.8
SMAD3-209ENST00000558894 ICAM4Q14773 271 aa3.8□□□□□ -1.8
SMAD3-209ENST00000558894 C9orf62Q8N4C0 152 aa3.8□□□□□ -1.8
SMAD3-209ENST00000558894 BLNKQ8WV28 456 aa3.8□□□□□ -1.8
SMAD3-209ENST00000558894 MARVELD1Q9BSK0 173 aa3.8□□□□□ -1.8
SMAD3-209ENST00000558894 MRPS16Q9Y3D3 137 aaKnown RBP3.8□□□□□ -1.8
SMAD3-209ENST00000558894 VPS13BQ7Z7G8 4022 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms