RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 CACFD1Q9UGQ2 172 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 APLNQ9ULZ1 77 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 TP53TG1Q9Y2A0 90 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 HSPB11Q9Y547 144 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 DNAH17Q9UFH2 4485 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 EPPK1P58107 5090 aaKnown RBP2.98□□□□□ -1.93
SPG11-211ENST00000558561 IGHV4-4A0A075B6R2 117 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 A0A087X0K7 114 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 IGLL5B9A064 214 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 E5RGE8 158 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 FNDC10F2Z333 226 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 ISLRO14498 428 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 COX7A2P2O60397 106 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 PRAF2O60831 178 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 LY6G6CO95867 125 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 CD5P06127 495 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 HTN1P15515 57 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 ID1P41134 155 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 GALR1P47211 349 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 PSMB3P49720 205 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 RAB2AP61019 212 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 SNRPD3P62318 126 aaKnown RBP2.98□□□□□ -1.93
SPG11-211ENST00000558561 SELENOTP62341 195 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 RHOBP62745 196 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 HIST1H1AQ02539 215 aaPredicted RBP2.98□□□□□ -1.93
SPG11-211ENST00000558561 CD300CQ08708 224 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 ADAMTSL4-AS1Q5T5F5 129 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 CST9LP1Q5W188 147 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 MORN3Q6PF18 240 aaPredicted RBP2.98□□□□□ -1.93
SPG11-211ENST00000558561 ZNF738Q8NE65 137 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 GATAD1Q8WUU5 269 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 RPUSD4Q96CM3 377 aaKnown RBP2.98□□□□□ -1.93
SPG11-211ENST00000558561 FXYD5Q96DB9 178 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 AGPAT4-IT1Q9H0P7 198 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 RPRMQ9NS64 109 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 TP53TG3Q9ULZ0 132 aa2.98□□□□□ -1.93
SPG11-211ENST00000558561 FRAS1Q86XX4 4008 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 MUC4Q99102 2169 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 TRBV19A0A075B6N1 114 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 IGKV2-40A0A087WW87 121 aaPredicted RBP2.97□□□□□ -1.93
SPG11-211ENST00000558561 TRAV12-3A0A0B4J271 114 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 RNF222A6NCQ9 220 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 SCGB2A1O75556 95 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 CFDP00746 253 aaPredicted RBP2.97□□□□□ -1.93
SPG11-211ENST00000558561 IGKV2D-40P01614 121 aaPredicted RBP2.97□□□□□ -1.93
SPG11-211ENST00000558561 RLN2P04090 185 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 FABP1P07148 127 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 NBEAP1P0C6P0 100 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 RPL7P18124 248 aaKnown RBP2.97□□□□□ -1.93
SPG11-211ENST00000558561 PVALBP20472 110 aaPredicted RBP2.97□□□□□ -1.93
SPG11-211ENST00000558561 DEFA1P59665 94 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 DEFA3P59666 94 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 RANP62826 216 aaKnown RBP2.97□□□□□ -1.93
SPG11-211ENST00000558561 OXA1LQ15070 435 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 ATP6V1FQ16864 119 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 FAM222AQ5U5X8 452 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 RPL7L1Q6DKI1 246 aaKnown RBP2.97□□□□□ -1.93
SPG11-211ENST00000558561 EBLN2Q6P2I7 272 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 Q6ZRG5 221 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 ZNF546Q86UE3 836 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 HSD17B11Q8NBQ5 300 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 LRRC20Q8TCA0 184 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 TVP23CQ96ET8 276 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 PHYHIPLQ96FC7 376 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 LINC01587Q99440 93 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 MED28Q9H204 178 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 SH3BGRL3Q9H299 93 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 OR51M1Q9H341 326 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 Q9H8V8 135 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 CYTL1Q9NRR1 136 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 DNAH6Q9C0G6 4158 aa2.97□□□□□ -1.93
SPG11-211ENST00000558561 DNAH2Q9P225 4427 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 PIGBOS1A0A0B4J2F0 54 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 ZNF324O75467 553 aaPredicted RBP2.96□□□□□ -1.94
SPG11-211ENST00000558561 HIST1H1EP10412 219 aaKnown RBP2.96□□□□□ -1.94
SPG11-211ENST00000558561 MIFP14174 115 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 HTN3P15516 51 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 ATP6V0CP27449 155 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 RNASE4P34096 147 aaKnown RBP2.96□□□□□ -1.94
SPG11-211ENST00000558561 GNG5P63218 68 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 CYCSP99999 105 aaKnown RBP2.96□□□□□ -1.94
SPG11-211ENST00000558561 BTN1A1Q13410 526 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 ZNF726P1Q15940 193 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 ZFP69Q49AA0 526 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 STX12Q86Y82 276 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 BPIFA4PQ86YQ2 179 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 FAM19A4Q96LR4 140 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 IGF2BP2-AS1Q96M15 143 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 LINC00479Q96M42 142 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 ATP5SQ99766 215 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 PAXXQ9BUH6 204 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 SLC25A31Q9H0C2 315 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 FUT9Q9Y231 359 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 KLF12Q9Y4X4 402 aa2.96□□□□□ -1.94
SPG11-211ENST00000558561 YTHDF2Q9Y5A9 579 aaKnown RBP2.96□□□□□ -1.94
SPG11-211ENST00000558561 DEFB131BA0A096LNP1 70 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 TRAV8-1A0A0A6YYK1 113 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 A0A1B0GVG6 124 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 PGPA6NDG6 321 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 M0R2N4 97 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms