RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 FAM122CQ6P4D5 195 aa9.54□□□□□ -0.88
CHMP1A-210ENST00000551981 SH2D6Q7Z4S9 175 aa9.54□□□□□ -0.88
CHMP1A-210ENST00000551981 ZNF479Q96JC4 524 aa9.54□□□□□ -0.88
CHMP1A-210ENST00000551981 GPN1Q9HCN4 374 aaPredicted RBP9.54□□□□□ -0.88
CHMP1A-210ENST00000551981 TRBV7-9A0A0J9YWB2 115 aa9.53□□□□□ -0.88
CHMP1A-210ENST00000551981 LRCOL1A6NCL2 159 aa9.53□□□□□ -0.88
CHMP1A-210ENST00000551981 PLA2G1BP04054 148 aaKnown RBP9.53□□□□□ -0.88
CHMP1A-210ENST00000551981 PVALBP20472 110 aaPredicted RBP9.53□□□□□ -0.88
CHMP1A-210ENST00000551981 S100A11P31949 105 aa9.53□□□□□ -0.88
CHMP1A-210ENST00000551981 ZNF138P52744 262 aa9.53□□□□□ -0.88
CHMP1A-210ENST00000551981 HBG1P69891 147 aa9.53□□□□□ -0.88
CHMP1A-210ENST00000551981 HBG2P69892 147 aa9.53□□□□□ -0.88
CHMP1A-210ENST00000551981 Q6ZQT7 251 aa9.53□□□□□ -0.88
CHMP1A-210ENST00000551981 Q8N814 137 aa9.53□□□□□ -0.88
CHMP1A-210ENST00000551981 CHAC2Q8WUX2 184 aa9.53□□□□□ -0.88
CHMP1A-210ENST00000551981 RASL10AQ92737 203 aa9.53□□□□□ -0.88
CHMP1A-210ENST00000551981 SPXQ9BT56 116 aa9.53□□□□□ -0.88
CHMP1A-210ENST00000551981 IGHV3-38A0A0C4DH36 116 aa9.52□□□□□ -0.89
CHMP1A-210ENST00000551981 FAM24AA6NFZ4 105 aa9.52□□□□□ -0.89
CHMP1A-210ENST00000551981 FAM25EA8MYX2 175 aa9.52□□□□□ -0.89
CHMP1A-210ENST00000551981 C1QBP02746 253 aa9.52□□□□□ -0.89
CHMP1A-210ENST00000551981 SULT1A1P50225 295 aa9.52□□□□□ -0.89
CHMP1A-210ENST00000551981 CNPY1Q3B7I2 92 aa9.52□□□□□ -0.89
CHMP1A-210ENST00000551981 MUC21Q5SSG8 566 aa9.52□□□□□ -0.89
CHMP1A-210ENST00000551981 STX12Q86Y82 276 aa9.52□□□□□ -0.89
CHMP1A-210ENST00000551981 BOLA1Q9Y3E2 137 aa9.52□□□□□ -0.89
CHMP1A-210ENST00000551981 HMCN2Q8NDA2 5059 aa9.51□□□□□ -0.89
CHMP1A-210ENST00000551981 TRGV11A0A075B6L2 103 aa9.51□□□□□ -0.89
CHMP1A-210ENST00000551981 CCSO14618 274 aa9.51□□□□□ -0.89
CHMP1A-210ENST00000551981 FGF7P21781 194 aa9.51□□□□□ -0.89
CHMP1A-210ENST00000551981 PPT1P50897 306 aa9.51□□□□□ -0.89
CHMP1A-210ENST00000551981 TIRAPP58753 221 aa9.51□□□□□ -0.89
CHMP1A-210ENST00000551981 NHLRC2Q8NBF2 726 aa9.51□□□□□ -0.89
CHMP1A-210ENST00000551981 Q8TAT8 98 aa9.51□□□□□ -0.89
CHMP1A-210ENST00000551981 SLC25A2Q9BXI2 301 aa9.51□□□□□ -0.89
CHMP1A-210ENST00000551981 SLC25A31Q9H0C2 315 aa9.51□□□□□ -0.89
CHMP1A-210ENST00000551981 TRAV4A0A0B4J268 109 aa9.5□□□□□ -0.89
CHMP1A-210ENST00000551981 KRTAP29-1A8MX34 341 aaPredicted RBP9.5□□□□□ -0.89
CHMP1A-210ENST00000551981 NBEAP1P0C6P0 100 aa9.5□□□□□ -0.89
CHMP1A-210ENST00000551981 CSN1S1P47710 185 aa9.5□□□□□ -0.89
CHMP1A-210ENST00000551981 ZNF266Q14584 549 aa9.5□□□□□ -0.89
CHMP1A-210ENST00000551981 BAK1Q16611 211 aa9.5□□□□□ -0.89
CHMP1A-210ENST00000551981 ATP6V1FQ16864 119 aa9.5□□□□□ -0.89
CHMP1A-210ENST00000551981 TMEM183BQ1AE95 376 aa9.5□□□□□ -0.89
CHMP1A-210ENST00000551981 LINC01556Q5JQF7 62 aa9.5□□□□□ -0.89
CHMP1A-210ENST00000551981 FAM159AQ6UWV7 190 aa9.5□□□□□ -0.89
CHMP1A-210ENST00000551981 TMEM183AQ8IXX5 376 aa9.5□□□□□ -0.89
CHMP1A-210ENST00000551981 OR4C5Q8NGB2 326 aa9.5□□□□□ -0.89
CHMP1A-210ENST00000551981 Q9HAA7 133 aa9.5□□□□□ -0.89
CHMP1A-210ENST00000551981 LYRM2Q9NU23 88 aaPredicted RBP9.5□□□□□ -0.89
CHMP1A-210ENST00000551981 UBR4Q5T4S7 5183 aa9.49□□□□□ -0.89
CHMP1A-210ENST00000551981 TRAV8-6A0A0B4J262 113 aa9.49□□□□□ -0.89
CHMP1A-210ENST00000551981 C5orf51A6NDU8 294 aa9.49□□□□□ -0.89
CHMP1A-210ENST00000551981 CCDC160A6NGH7 325 aa9.49□□□□□ -0.89
CHMP1A-210ENST00000551981 IBA57-AS1B1ANH7 110 aa9.49□□□□□ -0.89
CHMP1A-210ENST00000551981 BTCP35070 178 aa9.49□□□□□ -0.89
CHMP1A-210ENST00000551981 S100A10P60903 97 aa9.49□□□□□ -0.89
CHMP1A-210ENST00000551981 GCSAMLQ5JQS6 135 aa9.49□□□□□ -0.89
CHMP1A-210ENST00000551981 DEFB104AQ8WTQ1 72 aa9.49□□□□□ -0.89
CHMP1A-210ENST00000551981 NPCDR1Q9BY65 106 aa9.49□□□□□ -0.89
CHMP1A-210ENST00000551981 OR51M1Q9H341 326 aa9.49□□□□□ -0.89
CHMP1A-210ENST00000551981 C11orf1Q9H5F2 150 aa9.49□□□□□ -0.89
CHMP1A-210ENST00000551981 RBAKDNA6NC62 111 aa9.48□□□□□ -0.89
CHMP1A-210ENST00000551981 FAM167A-AS1Q96KT0 104 aa9.48□□□□□ -0.89
CHMP1A-210ENST00000551981 FAM30AQ9NZY2 134 aa9.48□□□□□ -0.89
CHMP1A-210ENST00000551981 LOC100131303A0A0U1RQF7 123 aa9.47□□□□□ -0.89
CHMP1A-210ENST00000551981 IGSF23A1L1A6 192 aa9.47□□□□□ -0.89
CHMP1A-210ENST00000551981 OR10J3Q5JRS4 329 aa9.47□□□□□ -0.89
CHMP1A-210ENST00000551981 SERTAD4-AS1Q5TG53 156 aa9.47□□□□□ -0.89
CHMP1A-210ENST00000551981 Q6AWC8 147 aa9.47□□□□□ -0.89
CHMP1A-210ENST00000551981 MIR17HGQ75NE6 70 aa9.47□□□□□ -0.89
CHMP1A-210ENST00000551981 LINC00528Q8N1L1 170 aa9.47□□□□□ -0.89
CHMP1A-210ENST00000551981 TMEM252Q8N6L7 170 aa9.47□□□□□ -0.89
CHMP1A-210ENST00000551981 SYT8Q8NBV8 401 aa9.47□□□□□ -0.89
CHMP1A-210ENST00000551981 C2orf50Q96LR7 162 aa9.47□□□□□ -0.89
CHMP1A-210ENST00000551981 PAXXQ9BUH6 204 aa9.47□□□□□ -0.89
CHMP1A-210ENST00000551981 LENEPQ9Y5L5 61 aa9.47□□□□□ -0.89
CHMP1A-210ENST00000551981 M0R2P5 195 aa9.46□□□□□ -0.9
CHMP1A-210ENST00000551981 PFN1P07737 140 aaKnown RBP9.46□□□□□ -0.9
CHMP1A-210ENST00000551981 OR10J4P0C629 311 aa9.46□□□□□ -0.9
CHMP1A-210ENST00000551981 FXYD5Q96DB9 178 aa9.46□□□□□ -0.9
CHMP1A-210ENST00000551981 PHYHIPLQ96FC7 376 aa9.46□□□□□ -0.9
CHMP1A-210ENST00000551981 TM2D2Q9BX73 214 aa9.46□□□□□ -0.9
CHMP1A-210ENST00000551981 KCNIP2Q9NS61 270 aa9.46□□□□□ -0.9
CHMP1A-210ENST00000551981 NAGKQ9UJ70 344 aa9.46□□□□□ -0.9
CHMP1A-210ENST00000551981 GATA1P15976 413 aaPredicted RBP9.45□□□□□ -0.9
CHMP1A-210ENST00000551981 LAGE3Q14657 143 aa9.45□□□□□ -0.9
CHMP1A-210ENST00000551981 TDRG1Q3Y452 100 aa9.45□□□□□ -0.9
CHMP1A-210ENST00000551981 LRP1Q07954 4544 aaKnown RBP9.44□□□□□ -0.9
CHMP1A-210ENST00000551981 IGHV3-16A0A0C4DH30 117 aa9.44□□□□□ -0.9
CHMP1A-210ENST00000551981 OR7C2O60412 319 aa9.44□□□□□ -0.9
CHMP1A-210ENST00000551981 IGHV3-30P01768 117 aa9.44□□□□□ -0.9
CHMP1A-210ENST00000551981 IGHV3-33P01772 117 aa9.44□□□□□ -0.9
CHMP1A-210ENST00000551981 IGHV3-30-3P0DP02 117 aa9.44□□□□□ -0.9
CHMP1A-210ENST00000551981 IGHV3-30-5P0DP03 117 aa9.44□□□□□ -0.9
CHMP1A-210ENST00000551981 RANP62826 216 aaKnown RBP9.44□□□□□ -0.9
CHMP1A-210ENST00000551981 Q6ZSA8 131 aa9.44□□□□□ -0.9
CHMP1A-210ENST00000551981 THAP6Q8TBB0 222 aa9.44□□□□□ -0.9
CHMP1A-210ENST00000551981 ATP5SQ99766 215 aa9.44□□□□□ -0.9
CHMP1A-210ENST00000551981 FBLL1A6NHQ2 334 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms