RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 MIR7-3HGQ8N6C7 128 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 ADAT3Q96EY9 351 aaPredicted RBP3.17□□□□□ -1.9
CPSF6-206ENST00000550987 TSPAN32Q96QS1 320 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 PSMG3Q9BT73 122 aaPredicted RBP3.17□□□□□ -1.9
CPSF6-206ENST00000550987 ZNF436Q9C0F3 470 aaPredicted RBP3.17□□□□□ -1.9
CPSF6-206ENST00000550987 BPESC1Q9GZL8 116 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 TMEM222Q9H0R3 208 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 EFCAB1Q9HAE3 211 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 NAT8BQ9UHF3 227 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 BAIAP2Q9UQB8 552 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 ZFP30Q9Y2G7 519 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 TRBV19A0A075B6N1 114 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 TRAV5A0A0B4J249 113 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 TRAV38-1A0A0B4J264 116 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 IGHV1-69-2A0A0G2JMI3 117 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 DUXBA0A1W2PPF3 345 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 M0R143 59 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 LGALS9O00182 355 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 CORTO00230 105 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 FFAR1O14842 300 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 KCNK2O95069 426 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 CSN2P05814 226 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 SMIM17P0DL12 118 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 PPP1CCP36873 323 aaKnown RBP3.16□□□□□ -1.9
CPSF6-206ENST00000550987 ZNF83P51522 516 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 DSCR4P56555 118 aaPredicted RBP3.16□□□□□ -1.9
CPSF6-206ENST00000550987 LINC00315P59091 139 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 JOSD1Q15040 202 aaPredicted RBP3.16□□□□□ -1.9
CPSF6-206ENST00000550987 NNATQ16517 81 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 TMEM241Q24JQ0 296 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 SP6Q3SY56 376 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 ZNF678Q5SXM1 525 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 TEX261Q6UWH6 196 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 ZNF709Q8N972 641 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 SPANXA2-OT1Q8N9U9 137 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 TMEM229BQ8NBD8 167 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 ZNF555Q8NEP9 628 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 OR13C8Q8NGS7 320 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 ACOT12Q8WYK0 555 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 RBPMSQ93062 196 aaKnown RBP3.16□□□□□ -1.9
CPSF6-206ENST00000550987 TMEM106AQ96A25 262 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 TP53RKQ96S44 253 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 OR2H1Q9GZK4 316 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 CXorf21Q9HAI6 301 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 LINC00527Q9UJ94 153 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 POMPQ9Y244 141 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 PXMP4Q9Y6I8 212 aa3.16□□□□□ -1.9
CPSF6-206ENST00000550987 GNG7O60262 68 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 LHBP01229 141 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 OPN1SWP03999 348 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 TGFBR1P36897 503 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 SSR2P43308 183 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 HBA1P69905 142 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 MMDQ15546 238 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 Q6ZRU5 148 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 SGPP2Q8IWX5 399 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 ST20-AS1Q8NBB2 130 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 OR52R1Q8NGF1 315 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 OR8A1Q8NGG7 326 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 OR5A2Q8NGI9 324 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 OR51T1Q8NGJ9 327 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 SFT2D1Q8WV19 159 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 FXYD5Q96DB9 178 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 OR52B2Q96RD2 323 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 NMNAT3Q96T66 252 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 RTL8AQ9BWD3 113 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 SMIM3Q9BZL3 60 aa3.15□□□□□ -1.91
CPSF6-206ENST00000550987 ZNF230Q9UIE0 474 aaPredicted RBP3.15□□□□□ -1.91
CPSF6-206ENST00000550987 IGLV2-18A0A075B6J9 118 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 MEIS3P1A6NDR6 274 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 COLCA2A8K830 154 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 FABP5P3A8MUU1 101 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 C9JAW5 83 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 J3QRK9 145 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 LYZL6O75951 148 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 ZNF682O95780 498 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 UCHL1P09936 223 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 BCL2P10415 239 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 RPL7P18124 248 aaKnown RBP3.14□□□□□ -1.91
CPSF6-206ENST00000550987 FGF7P21781 194 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 S100A2P29034 98 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 MP68P56378 58 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 TAS2R20P59543 309 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
CPSF6-206ENST00000550987 RPS25P62851 125 aaKnown RBP3.14□□□□□ -1.91
CPSF6-206ENST00000550987 HIST1H1AQ02539 215 aaPredicted RBP3.14□□□□□ -1.91
CPSF6-206ENST00000550987 DHRS2Q13268 280 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 HSD17B12Q53GQ0 312 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 ATP5L2Q7Z4Y8 100 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 DAZ4Q86SG3 579 aaKnown RBP3.14□□□□□ -1.91
CPSF6-206ENST00000550987 H1FOOQ8IZA3 346 aaPredicted RBP3.14□□□□□ -1.91
CPSF6-206ENST00000550987 TCTEX1D1Q8N7M0 179 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 OR2M3Q8NG83 312 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 MAGOHBQ96A72 148 aaKnown RBP3.14□□□□□ -1.91
CPSF6-206ENST00000550987 MUCL1Q96DR8 90 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 C1QTNF6Q9BXI9 259 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 IMUPQ9GZP8 106 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 LPAR5Q9H1C0 372 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 CACYBPQ9HB71 228 aaKnown RBP3.14□□□□□ -1.91
CPSF6-206ENST00000550987 DAZ1Q9NQZ3 744 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms