RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 FBLL1A6NHQ2 334 aaKnown RBP11.66□□□□□ -0.54
CHMP1A-209ENST00000550872 C3orf84H3BNL1 204 aa11.66□□□□□ -0.54
CHMP1A-209ENST00000550872 AZU1P20160 251 aa11.66□□□□□ -0.54
CHMP1A-209ENST00000550872 BLOC1S1P78537 153 aa11.66□□□□□ -0.54
CHMP1A-209ENST00000550872 ZFAND6Q6FIF0 208 aa11.66□□□□□ -0.54
CHMP1A-209ENST00000550872 PRNTQ86SH4 94 aa11.66□□□□□ -0.54
CHMP1A-209ENST00000550872 TMEM75Q8N9X5 138 aa11.66□□□□□ -0.54
CHMP1A-209ENST00000550872 TVP23CQ96ET8 276 aa11.66□□□□□ -0.54
CHMP1A-209ENST00000550872 LINC00479Q96M42 142 aa11.66□□□□□ -0.54
CHMP1A-209ENST00000550872 PYGO2Q9BRQ0 406 aa11.66□□□□□ -0.54
CHMP1A-209ENST00000550872 MANBALQ9NQG1 85 aa11.66□□□□□ -0.54
CHMP1A-209ENST00000550872 ZNF324O75467 553 aaPredicted RBP11.65□□□□□ -0.54
CHMP1A-209ENST00000550872 IGLV2-11P01706 119 aa11.65□□□□□ -0.54
CHMP1A-209ENST00000550872 NANOS2P60321 138 aaKnown RBP11.65□□□□□ -0.54
CHMP1A-209ENST00000550872 TCEAL7Q9BRU2 100 aa11.65□□□□□ -0.54
CHMP1A-209ENST00000550872 C11orf94C9JXX5 98 aa11.64□□□□□ -0.55
CHMP1A-209ENST00000550872 RGS13O14921 159 aa11.64□□□□□ -0.55
CHMP1A-209ENST00000550872 IFNA1P01562 189 aa11.64□□□□□ -0.55
CHMP1A-209ENST00000550872 PMS2P11Q13670 270 aa11.64□□□□□ -0.55
CHMP1A-209ENST00000550872 Q6ZQT7 251 aa11.64□□□□□ -0.55
CHMP1A-209ENST00000550872 CELA1Q9UNI1 258 aa11.64□□□□□ -0.55
CHMP1A-209ENST00000550872 SPART-AS1P0CW21 52 aa11.63□□□□□ -0.55
CHMP1A-209ENST00000550872 AKR1C3P42330 323 aa11.63□□□□□ -0.55
CHMP1A-209ENST00000550872 UBE2G1P62253 170 aa11.63□□□□□ -0.55
CHMP1A-209ENST00000550872 SAPCD1Q5SSQ6 148 aa11.63□□□□□ -0.55
CHMP1A-209ENST00000550872 Q6AWC8 147 aa11.63□□□□□ -0.55
CHMP1A-209ENST00000550872 ZNF493Q6ZR52 646 aa11.63□□□□□ -0.55
CHMP1A-209ENST00000550872 C16orf74Q96GX8 76 aa11.63□□□□□ -0.55
CHMP1A-209ENST00000550872 C8orf49Q96NF6 230 aa11.63□□□□□ -0.55
CHMP1A-209ENST00000550872 IGHV1OR15-1A0A075B7D0 117 aa11.62□□□□□ -0.55
CHMP1A-209ENST00000550872 FAM222AQ5U5X8 452 aa11.62□□□□□ -0.55
CHMP1A-209ENST00000550872 EIF4E3Q8N5X7 224 aaKnown RBP11.62□□□□□ -0.55
CHMP1A-209ENST00000550872 TMEM263Q8WUH6 116 aaKnown RBP11.62□□□□□ -0.55
CHMP1A-209ENST00000550872 FMC1Q96HJ9 113 aa11.62□□□□□ -0.55
CHMP1A-209ENST00000550872 LINC00467Q9BRT7 94 aa11.62□□□□□ -0.55
CHMP1A-209ENST00000550872 DKK2Q9UBU2 259 aa11.62□□□□□ -0.55
CHMP1A-209ENST00000550872 TEX48A0A1B0GUV7 120 aa11.61□□□□□ -0.55
CHMP1A-209ENST00000550872 SCO2A0A1W2PP80 73 aa11.61□□□□□ -0.55
CHMP1A-209ENST00000550872 CBY3A6NI87 242 aa11.61□□□□□ -0.55
CHMP1A-209ENST00000550872 MUC21Q5SSG8 566 aa11.61□□□□□ -0.55
CHMP1A-209ENST00000550872 ZNF767PQ75MW2 155 aa11.61□□□□□ -0.55
CHMP1A-209ENST00000550872 Q86TA4 180 aa11.61□□□□□ -0.55
CHMP1A-209ENST00000550872 RNASE8Q8TDE3 154 aaKnown RBP11.61□□□□□ -0.55
CHMP1A-209ENST00000550872 TXNDC17Q9BRA2 123 aa11.61□□□□□ -0.55
CHMP1A-209ENST00000550872 KLF12Q9Y4X4 402 aa11.61□□□□□ -0.55
CHMP1A-209ENST00000550872 TRAV21A0A0B4J279 112 aa11.6□□□□□ -0.55
CHMP1A-209ENST00000550872 PLAC8L1A1L4L8 177 aa11.6□□□□□ -0.55
CHMP1A-209ENST00000550872 GCGP01275 180 aa11.6□□□□□ -0.55
CHMP1A-209ENST00000550872 BCL2P10415 239 aa11.6□□□□□ -0.55
CHMP1A-209ENST00000550872 TMEM183BQ1AE95 376 aa11.6□□□□□ -0.55
CHMP1A-209ENST00000550872 C12orf74Q32Q52 190 aa11.6□□□□□ -0.55
CHMP1A-209ENST00000550872 ANXA2RQ3ZCQ2 193 aa11.6□□□□□ -0.55
CHMP1A-209ENST00000550872 SMUG1Q53HV7 270 aa11.6□□□□□ -0.55
CHMP1A-209ENST00000550872 CASC10Q5T4H9 136 aa11.6□□□□□ -0.55
CHMP1A-209ENST00000550872 ZFP30Q9Y2G7 519 aa11.6□□□□□ -0.55
CHMP1A-209ENST00000550872 TIMM8BQ9Y5J9 83 aaPredicted RBP11.6□□□□□ -0.55
CHMP1A-209ENST00000550872 LYRM9A8MSI8 78 aa11.59□□□□□ -0.55
CHMP1A-209ENST00000550872 SNURFLB1AK76 121 aa11.59□□□□□ -0.55
CHMP1A-209ENST00000550872 S100A9P06702 114 aaKnown RBP11.59□□□□□ -0.55
CHMP1A-209ENST00000550872 TAGLN2P37802 199 aaKnown RBP11.59□□□□□ -0.55
CHMP1A-209ENST00000550872 ZNF80P51504 273 aaPredicted RBP11.59□□□□□ -0.55
CHMP1A-209ENST00000550872 TEX261Q6UWH6 196 aa11.59□□□□□ -0.55
CHMP1A-209ENST00000550872 FAM159AQ6UWV7 190 aa11.59□□□□□ -0.55
CHMP1A-209ENST00000550872 C2CD4CQ8TF44 421 aa11.59□□□□□ -0.55
CHMP1A-209ENST00000550872 PHLDA1Q8WV24 401 aaPredicted RBP11.59□□□□□ -0.55
CHMP1A-209ENST00000550872 NOP10Q9NPE3 64 aaKnown RBP11.59□□□□□ -0.55
CHMP1A-209ENST00000550872 VAX2Q9UIW0 290 aa11.59□□□□□ -0.55
CHMP1A-209ENST00000550872 NAGKQ9UJ70 344 aa11.59□□□□□ -0.55
CHMP1A-209ENST00000550872 TRBV6-1A0A0K0K1D8 114 aa11.58□□□□□ -0.56
CHMP1A-209ENST00000550872 DAD1P61803 113 aa11.58□□□□□ -0.56
CHMP1A-209ENST00000550872 MEF2BQ02080 365 aaPredicted RBP11.58□□□□□ -0.56
CHMP1A-209ENST00000550872 Q6ZTC4 211 aa11.58□□□□□ -0.56
CHMP1A-209ENST00000550872 ZNF680Q8NEM1 530 aa11.58□□□□□ -0.56
CHMP1A-209ENST00000550872 LYPD6BQ8NI32 183 aa11.58□□□□□ -0.56
CHMP1A-209ENST00000550872 GSN-AS1Q9NRJ2 163 aa11.58□□□□□ -0.56
CHMP1A-209ENST00000550872 TP53TG3Q9ULZ0 132 aa11.58□□□□□ -0.56
CHMP1A-209ENST00000550872 NUPR2A6NF83 97 aa11.57□□□□□ -0.56
CHMP1A-209ENST00000550872 PFN1P07737 140 aaKnown RBP11.57□□□□□ -0.56
CHMP1A-209ENST00000550872 DEFB130BP0DP73 79 aa11.57□□□□□ -0.56
CHMP1A-209ENST00000550872 DEFB130AP0DP74 79 aa11.57□□□□□ -0.56
CHMP1A-209ENST00000550872 CEMP1Q6PRD7 247 aaPredicted RBP11.57□□□□□ -0.56
CHMP1A-209ENST00000550872 C11orf52Q96A22 123 aa11.57□□□□□ -0.56
CHMP1A-209ENST00000550872 PDE6DO43924 150 aa11.56□□□□□ -0.56
CHMP1A-209ENST00000550872 LTAP01374 205 aa11.56□□□□□ -0.56
CHMP1A-209ENST00000550872 TMEM183AQ8IXX5 376 aa11.56□□□□□ -0.56
CHMP1A-209ENST00000550872 C11orf72Q8NBR9 251 aa11.56□□□□□ -0.56
CHMP1A-209ENST00000550872 TRGV11A0A075B6L2 103 aa11.55□□□□□ -0.56
CHMP1A-209ENST00000550872 TRAV10A0A0B4J240 114 aa11.55□□□□□ -0.56
CHMP1A-209ENST00000550872 RBFOX3A6NFN3 312 aa11.55□□□□□ -0.56
CHMP1A-209ENST00000550872 FABP5P3A8MUU1 101 aa11.55□□□□□ -0.56
CHMP1A-209ENST00000550872 GNRH2O43555 120 aa11.55□□□□□ -0.56
CHMP1A-209ENST00000550872 RPL35P42766 123 aaKnown RBP11.55□□□□□ -0.56
CHMP1A-209ENST00000550872 DAZ2Q13117 558 aaKnown RBP11.55□□□□□ -0.56
CHMP1A-209ENST00000550872 TDRG1Q3Y452 100 aa11.55□□□□□ -0.56
CHMP1A-209ENST00000550872 IBA57Q5T440 356 aaKnown RBP11.55□□□□□ -0.56
CHMP1A-209ENST00000550872 BAGE2Q86Y30 109 aa11.55□□□□□ -0.56
CHMP1A-209ENST00000550872 PCNPQ8WW12 178 aaKnown RBP11.55□□□□□ -0.56
CHMP1A-209ENST00000550872 ZC2HC1AQ96GY0 325 aa11.55□□□□□ -0.56
CHMP1A-209ENST00000550872 KCNS1Q96KK3 526 aa11.55□□□□□ -0.56
CHMP1A-209ENST00000550872 SDF2L1Q9HCN8 221 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 320 ms