RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 LOXP28300 417 aaPredicted RBP15.38■□□□□ 0.05
SUDS3-204ENST00000543473 ODF3L1Q8IXM7 274 aa15.38■□□□□ 0.05
SUDS3-204ENST00000543473 C17orf77Q96MU5 243 aa15.38■□□□□ 0.05
SUDS3-204ENST00000543473 IGLV2-14P01704 120 aa15.38■□□□□ 0.05
SUDS3-204ENST00000543473 NOTCH2Q04721 2471 aa15.37■□□□□ 0.05
SUDS3-204ENST00000543473 SMIM2Q9BVW6 85 aa15.37■□□□□ 0.05
SUDS3-204ENST00000543473 PMVKQ15126 192 aa15.37■□□□□ 0.05
SUDS3-204ENST00000543473 LY6G5BQ8NDX9 201 aa15.37■□□□□ 0.05
SUDS3-204ENST00000543473 E7EQL1 145 aa15.36■□□□□ 0.05
SUDS3-204ENST00000543473 OR11H6Q8NGC7 330 aa15.36■□□□□ 0.05
SUDS3-204ENST00000543473 TEX36Q5VZQ5 186 aa15.36■□□□□ 0.05
SUDS3-204ENST00000543473 SPANXA1Q9NS26 97 aa15.35■□□□□ 0.05
SUDS3-204ENST00000543473 H3BMM0 161 aa15.35■□□□□ 0.05
SUDS3-204ENST00000543473 ZNF491Q8N8L2 437 aa15.35■□□□□ 0.05
SUDS3-204ENST00000543473 UBE2WQ96B02 151 aa15.35■□□□□ 0.05
SUDS3-204ENST00000543473 FAM215AQ9Y5M1 114 aa15.35■□□□□ 0.05
SUDS3-204ENST00000543473 TRBV25-1A0A075B6N4 114 aa15.35■□□□□ 0.05
SUDS3-204ENST00000543473 PRO1854Q9UHT4 67 aa15.35■□□□□ 0.05
SUDS3-204ENST00000543473 NEGR1Q7Z3B1 354 aa15.35■□□□□ 0.05
SUDS3-204ENST00000543473 SH2D6Q7Z4S9 175 aa15.35■□□□□ 0.05
SUDS3-204ENST00000543473 EML6Q6ZMW3 1958 aa15.35■□□□□ 0.05
SUDS3-204ENST00000543473 OBSL1O75147 1896 aa15.34■□□□□ 0.05
SUDS3-204ENST00000543473 IGLV3-9A0A075B6K5 115 aa15.34■□□□□ 0.05
SUDS3-204ENST00000543473 LINC00158P58513 81 aa15.34■□□□□ 0.05
SUDS3-204ENST00000543473 RHPN1-AS1Q9BWJ2 59 aa15.34■□□□□ 0.05
SUDS3-204ENST00000543473 A0A087WX48 190 aa15.34■□□□□ 0.05
SUDS3-204ENST00000543473 PATE2Q6UY27 113 aa15.34■□□□□ 0.05
SUDS3-204ENST00000543473 FGF6P10767 208 aa15.34■□□□□ 0.05
SUDS3-204ENST00000543473 FAM167A-AS1Q96KT0 104 aa15.34■□□□□ 0.05
SUDS3-204ENST00000543473 PLA2G5P39877 138 aa15.33■□□□□ 0.05
SUDS3-204ENST00000543473 TMEM141Q96I45 108 aa15.33■□□□□ 0.05
SUDS3-204ENST00000543473 EGR2P11161 476 aaPredicted RBP15.33■□□□□ 0.04
SUDS3-204ENST00000543473 ADARB2-AS1A8MUL3 147 aa15.33■□□□□ 0.04
SUDS3-204ENST00000543473 CRPP02741 224 aa15.33■□□□□ 0.04
SUDS3-204ENST00000543473 PEMTQ9UBM1 199 aa15.33■□□□□ 0.04
SUDS3-204ENST00000543473 FREM1Q5H8C1 2179 aa15.32■□□□□ 0.04
SUDS3-204ENST00000543473 LGALS1P09382 135 aaKnown RBP15.32■□□□□ 0.04
SUDS3-204ENST00000543473 GTSF1Q8WW33 167 aa15.32■□□□□ 0.04
SUDS3-204ENST00000543473 A0A1W2PNU3 283 aaPredicted RBP15.32■□□□□ 0.04
SUDS3-204ENST00000543473 RASL10AQ92737 203 aa15.32■□□□□ 0.04
SUDS3-204ENST00000543473 WDR87Q6ZQQ6 2873 aa15.31■□□□□ 0.04
SUDS3-204ENST00000543473 CFAP161Q6P656 301 aa15.31■□□□□ 0.04
SUDS3-204ENST00000543473 EDA2RQ9HAV5 297 aa15.31■□□□□ 0.04
SUDS3-204ENST00000543473 SLC25A20O43772 301 aa15.31■□□□□ 0.04
SUDS3-204ENST00000543473 SDHAF1A6NFY7 115 aa15.31■□□□□ 0.04
SUDS3-204ENST00000543473 Q6ZPA2 131 aa15.31■□□□□ 0.04
SUDS3-204ENST00000543473 GATD1Q8NB37 220 aa15.31■□□□□ 0.04
SUDS3-204ENST00000543473 IGKV1OR2-108A0A075B7D4 117 aa15.31■□□□□ 0.04
SUDS3-204ENST00000543473 IGLL5B9A064 214 aa15.31■□□□□ 0.04
SUDS3-204ENST00000543473 GP9P14770 177 aa15.31■□□□□ 0.04
SUDS3-204ENST00000543473 C3orf36Q3SXR2 165 aa15.31■□□□□ 0.04
SUDS3-204ENST00000543473 C8orf86Q6ZUL3 223 aa15.31■□□□□ 0.04
SUDS3-204ENST00000543473 FAM110DQ8TAY7 271 aaPredicted RBP15.31■□□□□ 0.04
SUDS3-204ENST00000543473 HIST1H4AP62805 103 aaKnown RBP15.3■□□□□ 0.04
SUDS3-204ENST00000543473 ZNF295-AS1Q8N0V1 137 aa15.3■□□□□ 0.04
SUDS3-204ENST00000543473 ATP6V0E1O15342 81 aa15.3■□□□□ 0.04
SUDS3-204ENST00000543473 TRPT1Q86TN4 253 aaKnown RBP15.3■□□□□ 0.04
SUDS3-204ENST00000543473 STHQ8IWL8 128 aa15.3■□□□□ 0.04
SUDS3-204ENST00000543473 TMEM86BQ8N661 226 aa15.3■□□□□ 0.04
SUDS3-204ENST00000543473 USMG5Q96IX5 58 aa15.29■□□□□ 0.04
SUDS3-204ENST00000543473 ZNF48Q96MX3 618 aaPredicted RBP15.29■□□□□ 0.04
SUDS3-204ENST00000543473 C1QTNF4Q9BXJ3 329 aa15.29■□□□□ 0.04
SUDS3-204ENST00000543473 SPAG8Q99932 426 aaPredicted RBP15.29■□□□□ 0.04
SUDS3-204ENST00000543473 C2orf70A6NJV1 201 aa15.29■□□□□ 0.04
SUDS3-204ENST00000543473 FAM223BA6NKX1 122 aa15.29■□□□□ 0.04
SUDS3-204ENST00000543473 PRIMA1Q86XR5 153 aa15.29■□□□□ 0.04
SUDS3-204ENST00000543473 FAM223AQ8IWN6 122 aa15.29■□□□□ 0.04
SUDS3-204ENST00000543473 IFITM1P13164 125 aa15.29■□□□□ 0.04
SUDS3-204ENST00000543473 CRIP3Q6Q6R5 217 aa15.29■□□□□ 0.04
SUDS3-204ENST00000543473 PAX4O43316 350 aa15.28■□□□□ 0.04
SUDS3-204ENST00000543473 C9orf153Q5TBE3 101 aa15.28■□□□□ 0.04
SUDS3-204ENST00000543473 C1orf159Q96HA4 380 aa15.28■□□□□ 0.04
SUDS3-204ENST00000543473 FOXI2Q6ZQN5 318 aa15.28■□□□□ 0.04
SUDS3-204ENST00000543473 PRSS22Q9GZN4 317 aa15.28■□□□□ 0.04
SUDS3-204ENST00000543473 OVOL3O00110 214 aa15.28■□□□□ 0.04
SUDS3-204ENST00000543473 GATA1P15976 413 aaPredicted RBP15.28■□□□□ 0.04
SUDS3-204ENST00000543473 FXYD2P54710 66 aa15.28■□□□□ 0.04
SUDS3-204ENST00000543473 SAA4P35542 130 aa15.28■□□□□ 0.04
SUDS3-204ENST00000543473 GAGE2AQ6NT46 116 aa15.28■□□□□ 0.04
SUDS3-204ENST00000543473 BRD3OSQ6XYD6 125 aa15.28■□□□□ 0.04
SUDS3-204ENST00000543473 KMT2EQ8IZD2 1858 aa15.28■□□□□ 0.04
SUDS3-204ENST00000543473 HLA-DMBP28068 263 aa15.27■□□□□ 0.04
SUDS3-204ENST00000543473 ANXA2RQ3ZCQ2 193 aa15.27■□□□□ 0.04
SUDS3-204ENST00000543473 H3BUX3 64 aa15.27■□□□□ 0.04
SUDS3-204ENST00000543473 CHCHD5Q9BSY4 110 aa15.27■□□□□ 0.04
SUDS3-204ENST00000543473 DAZ1Q9NQZ3 744 aaKnown RBP15.27■□□□□ 0.03
SUDS3-204ENST00000543473 J3QQQ9 107 aa15.27■□□□□ 0.03
SUDS3-204ENST00000543473 ZNF625Q96I27 306 aaPredicted RBP15.27■□□□□ 0.03
SUDS3-204ENST00000543473 C20orf78Q9BR46 151 aa15.27■□□□□ 0.03
SUDS3-204ENST00000543473 PCDH15Q96QU1 1955 aa15.26■□□□□ 0.03
SUDS3-204ENST00000543473 PRSS29PA6NIE9 313 aa15.26■□□□□ 0.03
SUDS3-204ENST00000543473 G3V318 75 aa15.26■□□□□ 0.03
SUDS3-204ENST00000543473 RPL36AP83881 106 aaKnown RBP15.26■□□□□ 0.03
SUDS3-204ENST00000543473 WFDC2Q14508 124 aa15.26■□□□□ 0.03
SUDS3-204ENST00000543473 RPL36ALQ969Q0 106 aaKnown RBP15.26■□□□□ 0.03
SUDS3-204ENST00000543473 TTTY13Q9BZ97 58 aa15.26■□□□□ 0.03
SUDS3-204ENST00000543473 C22orf46C9J442 243 aa15.26■□□□□ 0.03
SUDS3-204ENST00000543473 BPESC1Q9GZL8 116 aa15.26■□□□□ 0.03
SUDS3-204ENST00000543473 NCOR2Q9Y618 2525 aa15.26■□□□□ 0.03
SUDS3-204ENST00000543473 TRAV13-1A0A0B4J241 112 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 231.4 ms