RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 BTCP35070 178 aa13.38□□□□□ -0.27
LPCAT3-210ENST00000540090 BAXQ07812 192 aa13.38□□□□□ -0.27
LPCAT3-210ENST00000540090 ZNF846Q147U1 533 aa13.38□□□□□ -0.27
LPCAT3-210ENST00000540090 FAM122CQ6P4D5 195 aa13.38□□□□□ -0.27
LPCAT3-210ENST00000540090 TXNDC17Q9BRA2 123 aa13.38□□□□□ -0.27
LPCAT3-210ENST00000540090 FAM30AQ9NZY2 134 aa13.38□□□□□ -0.27
LPCAT3-210ENST00000540090 UBE2L5PA0A1B0GUS4 154 aa13.37□□□□□ -0.27
LPCAT3-210ENST00000540090 CCSO14618 274 aa13.37□□□□□ -0.27
LPCAT3-210ENST00000540090 S100A11P31949 105 aa13.37□□□□□ -0.27
LPCAT3-210ENST00000540090 ZNF138P52744 262 aa13.37□□□□□ -0.27
LPCAT3-210ENST00000540090 SPANXN2Q5MJ10 180 aa13.37□□□□□ -0.27
LPCAT3-210ENST00000540090 TRIQKQ629K1 86 aa13.37□□□□□ -0.27
LPCAT3-210ENST00000540090 PSCAO43653 123 aa13.36□□□□□ -0.27
LPCAT3-210ENST00000540090 SULT1A1P50225 295 aa13.36□□□□□ -0.27
LPCAT3-210ENST00000540090 FAM167A-AS1Q96KT0 104 aa13.36□□□□□ -0.27
LPCAT3-210ENST00000540090 SPXQ9BT56 116 aa13.36□□□□□ -0.27
LPCAT3-210ENST00000540090 SLC25A2Q9BXI2 301 aa13.36□□□□□ -0.27
LPCAT3-210ENST00000540090 C9JCJ5 164 aa13.35□□□□□ -0.27
LPCAT3-210ENST00000540090 NBEAP1P0C6P0 100 aa13.35□□□□□ -0.27
LPCAT3-210ENST00000540090 TIRAPP58753 221 aa13.35□□□□□ -0.27
LPCAT3-210ENST00000540090 ZNF266Q14584 549 aa13.35□□□□□ -0.27
LPCAT3-210ENST00000540090 CNPY1Q3B7I2 92 aa13.35□□□□□ -0.27
LPCAT3-210ENST00000540090 GCSAMLQ5JQS6 135 aa13.35□□□□□ -0.27
LPCAT3-210ENST00000540090 MUC21Q5SSG8 566 aa13.35□□□□□ -0.27
LPCAT3-210ENST00000540090 Q8N814 137 aa13.35□□□□□ -0.27
LPCAT3-210ENST00000540090 GPN1Q9HCN4 374 aaPredicted RBP13.35□□□□□ -0.27
LPCAT3-210ENST00000540090 IGHV3-38A0A0C4DH36 116 aa13.34□□□□□ -0.27
LPCAT3-210ENST00000540090 CENPXA8MT69 81 aa13.34□□□□□ -0.27
LPCAT3-210ENST00000540090 KRTAP29-1A8MX34 341 aaPredicted RBP13.34□□□□□ -0.27
LPCAT3-210ENST00000540090 FAM25EA8MYX2 175 aa13.34□□□□□ -0.27
LPCAT3-210ENST00000540090 IBA57-AS1B1ANH7 110 aa13.34□□□□□ -0.27
LPCAT3-210ENST00000540090 C1QBP02746 253 aa13.34□□□□□ -0.27
LPCAT3-210ENST00000540090 FGF7P21781 194 aa13.34□□□□□ -0.27
LPCAT3-210ENST00000540090 SH2D6Q7Z4S9 175 aa13.34□□□□□ -0.27
LPCAT3-210ENST00000540090 TMEM252Q8N6L7 170 aa13.34□□□□□ -0.27
LPCAT3-210ENST00000540090 Q8TAT8 98 aa13.34□□□□□ -0.27
LPCAT3-210ENST00000540090 LYRM2Q9NU23 88 aaPredicted RBP13.34□□□□□ -0.27
LPCAT3-210ENST00000540090 IGSF23A1L1A6 192 aa13.33□□□□□ -0.28
LPCAT3-210ENST00000540090 PVALBP20472 110 aaPredicted RBP13.33□□□□□ -0.28
LPCAT3-210ENST00000540090 ATP6V1FQ16864 119 aa13.33□□□□□ -0.28
LPCAT3-210ENST00000540090 LINC01556Q5JQF7 62 aa13.33□□□□□ -0.28
LPCAT3-210ENST00000540090 SDHCQ99643 169 aaPredicted RBP13.33□□□□□ -0.28
LPCAT3-210ENST00000540090 TRAV4A0A0B4J268 109 aa13.32□□□□□ -0.28
LPCAT3-210ENST00000540090 HBG1P69891 147 aa13.32□□□□□ -0.28
LPCAT3-210ENST00000540090 HBG2P69892 147 aa13.32□□□□□ -0.28
LPCAT3-210ENST00000540090 TMEM183BQ1AE95 376 aa13.32□□□□□ -0.28
LPCAT3-210ENST00000540090 Q6AWC8 147 aa13.32□□□□□ -0.28
LPCAT3-210ENST00000540090 MIR17HGQ75NE6 70 aa13.32□□□□□ -0.28
LPCAT3-210ENST00000540090 TMEM183AQ8IXX5 376 aa13.32□□□□□ -0.28
LPCAT3-210ENST00000540090 C2orf50Q96LR7 162 aa13.32□□□□□ -0.28
LPCAT3-210ENST00000540090 SLC25A31Q9H0C2 315 aa13.32□□□□□ -0.28
LPCAT3-210ENST00000540090 OR51M1Q9H341 326 aa13.32□□□□□ -0.28
LPCAT3-210ENST00000540090 TRGV11A0A075B6L2 103 aa13.31□□□□□ -0.28
LPCAT3-210ENST00000540090 LOC100131303A0A0U1RQF7 123 aa13.31□□□□□ -0.28
LPCAT3-210ENST00000540090 C5orf51A6NDU8 294 aa13.31□□□□□ -0.28
LPCAT3-210ENST00000540090 PLA2G1BP04054 148 aaKnown RBP13.31□□□□□ -0.28
LPCAT3-210ENST00000540090 STX12Q86Y82 276 aa13.31□□□□□ -0.28
LPCAT3-210ENST00000540090 OR4C5Q8NGB2 326 aa13.31□□□□□ -0.28
LPCAT3-210ENST00000540090 FXYD5Q96DB9 178 aa13.31□□□□□ -0.28
LPCAT3-210ENST00000540090 NPCDR1Q9BY65 106 aa13.31□□□□□ -0.28
LPCAT3-210ENST00000540090 HMCN2Q8NDA2 5059 aa13.31□□□□□ -0.28
LPCAT3-210ENST00000540090 RBAKDNA6NC62 111 aa13.3□□□□□ -0.28
LPCAT3-210ENST00000540090 IL15RAQ13261 267 aa13.3□□□□□ -0.28
LPCAT3-210ENST00000540090 FAM159AQ6UWV7 190 aa13.3□□□□□ -0.28
LPCAT3-210ENST00000540090 LRP1Q07954 4544 aaKnown RBP13.3□□□□□ -0.28
LPCAT3-210ENST00000540090 CSN1S1P47710 185 aa13.29□□□□□ -0.28
LPCAT3-210ENST00000540090 PAXXQ9BUH6 204 aa13.29□□□□□ -0.28
LPCAT3-210ENST00000540090 BOLA1Q9Y3E2 137 aa13.29□□□□□ -0.28
LPCAT3-210ENST00000540090 CCDC160A6NGH7 325 aa13.28□□□□□ -0.28
LPCAT3-210ENST00000540090 M0R2P5 195 aa13.28□□□□□ -0.28
LPCAT3-210ENST00000540090 OR10J4P0C629 311 aa13.28□□□□□ -0.28
LPCAT3-210ENST00000540090 PPT1P50897 306 aa13.28□□□□□ -0.28
LPCAT3-210ENST00000540090 TDRG1Q3Y452 100 aa13.28□□□□□ -0.28
LPCAT3-210ENST00000540090 NHLRC2Q8NBF2 726 aa13.28□□□□□ -0.28
LPCAT3-210ENST00000540090 DEFB104AQ8WTQ1 72 aa13.28□□□□□ -0.28
LPCAT3-210ENST00000540090 PHYHIPLQ96FC7 376 aa13.28□□□□□ -0.28
LPCAT3-210ENST00000540090 Q9HAA7 133 aa13.28□□□□□ -0.28
LPCAT3-210ENST00000540090 LENEPQ9Y5L5 61 aa13.28□□□□□ -0.28
LPCAT3-210ENST00000540090 TRAV8-6A0A0B4J262 113 aa13.27□□□□□ -0.29
LPCAT3-210ENST00000540090 GATA1P15976 413 aaPredicted RBP13.27□□□□□ -0.29
LPCAT3-210ENST00000540090 S100A10P60903 97 aa13.27□□□□□ -0.29
LPCAT3-210ENST00000540090 RAB32Q13637 225 aa13.27□□□□□ -0.29
LPCAT3-210ENST00000540090 Q6ZSA8 131 aa13.27□□□□□ -0.29
LPCAT3-210ENST00000540090 GNRH2O43555 120 aa13.26□□□□□ -0.29
LPCAT3-210ENST00000540090 PFN1P07737 140 aaKnown RBP13.26□□□□□ -0.29
LPCAT3-210ENST00000540090 IL7P13232 177 aa13.26□□□□□ -0.29
LPCAT3-210ENST00000540090 RANP62826 216 aaKnown RBP13.26□□□□□ -0.29
LPCAT3-210ENST00000540090 IGHV3-16A0A0C4DH30 117 aa13.25□□□□□ -0.29
LPCAT3-210ENST00000540090 PLA2G10O15496 165 aa13.25□□□□□ -0.29
LPCAT3-210ENST00000540090 LINC00528Q8N1L1 170 aa13.25□□□□□ -0.29
LPCAT3-210ENST00000540090 THAP6Q8TBB0 222 aa13.25□□□□□ -0.29
LPCAT3-210ENST00000540090 SEC22CQ9BRL7 303 aa13.25□□□□□ -0.29
LPCAT3-210ENST00000540090 FAT3Q8TDW7 4589 aa13.24□□□□□ -0.29
LPCAT3-210ENST00000540090 DIRC3C9JPN6 131 aa13.24□□□□□ -0.29
LPCAT3-210ENST00000540090 TCRBP04435 133 aa13.24□□□□□ -0.29
LPCAT3-210ENST00000540090 OR10J3Q5JRS4 329 aa13.24□□□□□ -0.29
LPCAT3-210ENST00000540090 SERTAD4-AS1Q5TG53 156 aa13.24□□□□□ -0.29
LPCAT3-210ENST00000540090 TMED6Q8WW62 240 aa13.24□□□□□ -0.29
LPCAT3-210ENST00000540090 NAGKQ9UJ70 344 aa13.24□□□□□ -0.29
LPCAT3-210ENST00000540090 UBR4Q5T4S7 5183 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms