RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 KNTC1P50748 2209 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 VWC2LB2RUY7 222 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 PIP4P1Q86T03 277 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 A0A087WX48 190 aa4.28□□□□□ -1.73
PTPRD-213ENST00000537002 J3KT08 172 aa4.28□□□□□ -1.73
PTPRD-213ENST00000537002 DUX5Q96PT3 197 aa4.28□□□□□ -1.73
PTPRD-213ENST00000537002 DPM3Q9P2X0 92 aa4.28□□□□□ -1.73
PTPRD-213ENST00000537002 PCNX2A6NKB5 2137 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 GATA1P15976 413 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-213ENST00000537002 DNAJC30Q96LL9 226 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 TANC2Q9HCD6 1990 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 A0A1B0GX51 115 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 F8VRH5 84 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 IGHV1-46P01743 117 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 ZNF134P52741 427 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 ODF1Q14990 250 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 PRO0461Q9UI25 63 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 TMEM200BQ69YZ2 307 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 Q71RC1 249 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-213ENST00000537002 COX8CQ7Z4L0 72 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 DTX2Q86UW9 622 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 C15orf65H3BRN8 121 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 K7EM74 188 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 IGHG3P01860 377 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 FAM106AQ4KMX7 169 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 NDUFA4L2Q9NRX3 87 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 MRAPQ8TCY5 172 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 DYNLRB2Q8TF09 96 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 NDPQ00604 133 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 SPRR3Q9UBC9 169 aa4.27□□□□□ -1.73
PTPRD-213ENST00000537002 BRWD1-AS2P59051 145 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 DUX4L9Q6RFH8 374 aaPredicted RBP4.26□□□□□ -1.73
PTPRD-213ENST00000537002 SIGLEC15Q6ZMC9 328 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 LRRC75A-AS1Q8N1F1 130 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 LINC01600Q96MT4 127 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 DUX3Q96PT4 197 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 CNFNQ9BYD5 112 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 LINC00574Q9H8X3 128 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 HCFC1P51610 2035 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 SNRPD3P62318 126 aaKnown RBP4.26□□□□□ -1.73
PTPRD-213ENST00000537002 ZNF876PQ49A33 203 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 SBSPONQ8IVN8 264 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 NCKAP5O14513 1909 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 IGHV1-3A0A0C4DH29 117 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 H3BT86 120 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 CFC1BP0CG36 223 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 CFC1P0CG37 223 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 Q0VFX4 171 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 C17orf77Q96MU5 243 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 FGF23Q9GZV9 251 aaPredicted RBP4.26□□□□□ -1.73
PTPRD-213ENST00000537002 CRPP02741 224 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 UBE2D3P61077 147 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 UBE2D2P62837 147 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 RPS28P62857 69 aaKnown RBP4.26□□□□□ -1.73
PTPRD-213ENST00000537002 WT1-ASQ06250 92 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 CDIP1Q9H305 208 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 HOXB4P17483 251 aaPredicted RBP4.26□□□□□ -1.73
PTPRD-213ENST00000537002 C2orf16Q68DN1 1984 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 LYNX1G3V0Z9 82 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 VCYO14598 125 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 LYNX1P0DP58 116 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 TPSG1Q9NRR2 321 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 TNCP24821 2201 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 C17orf100A8MU93 164 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 ADARB2-AS1A8MUL3 147 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 DTX1Q86Y01 620 aa4.26□□□□□ -1.73
PTPRD-213ENST00000537002 BSPH1Q075Z2 132 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 LOXL1Q08397 574 aaPredicted RBP4.25□□□□□ -1.73
PTPRD-213ENST00000537002 PI4KAP42356 2102 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 ARHGAP21Q5T5U3 1957 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 IGHV1-8P0DP01 117 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 GP9P14770 177 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 LINC00158P58513 81 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 RNF5Q99942 180 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 FAM236AA0A1B0GUQ0 79 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 FAM236BA0A1B0GV22 79 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 WIPF1O43516 503 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 PRR25Q96S07 402 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 XGP55808 180 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 OVOL1O14753 267 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 P0DMU3 169 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 FAM231AP0DMU4 169 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 FAM231CP0DMU5 169 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 UTF1Q5T230 341 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 PIMREGQ9BSJ6 248 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 LINC00527Q9UJ94 153 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 INTS1Q8N201 2190 aaKnown RBP4.25□□□□□ -1.73
PTPRD-213ENST00000537002 H3BRN7 92 aa4.25□□□□□ -1.73
PTPRD-213ENST00000537002 IGHV1-69DA0A0B4J2H0 117 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 J3QQQ9 107 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 C1orf159Q96HA4 380 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 TMEM141Q96I45 108 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 SIGLEC9Q9Y336 463 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 SMIM2Q9BVW6 85 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 UBE2D1P51668 147 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 C17orf58Q2M2W7 97 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 C15orf32Q32M92 178 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 PATE2Q6UY27 113 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 FAM57AQ8TBR7 257 aa4.24□□□□□ -1.73
PTPRD-213ENST00000537002 CHCHD5Q9BSY4 110 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms