RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 RPH3ALQ9UNE2 315 aa13.31□□□□□ -0.28
GMDS-208ENST00000530927 A0A1B0GV50 99 aa13.3□□□□□ -0.28
GMDS-208ENST00000530927 TAS2R60P59551 318 aa13.3□□□□□ -0.28
GMDS-208ENST00000530927 C9orf47Q6ZRZ4 202 aa13.3□□□□□ -0.28
GMDS-208ENST00000530927 TMEM256Q8N2U0 113 aa13.3□□□□□ -0.28
GMDS-208ENST00000530927 APLNQ9ULZ1 77 aa13.3□□□□□ -0.28
GMDS-208ENST00000530927 IGHV4-4A0A075B6R2 117 aa13.3□□□□□ -0.28
GMDS-208ENST00000530927 H7BYZ3 331 aa13.3□□□□□ -0.28
GMDS-208ENST00000530927 HTN3P15516 51 aa13.3□□□□□ -0.28
GMDS-208ENST00000530927 PPT1P50897 306 aa13.3□□□□□ -0.28
GMDS-208ENST00000530927 ZFAND2AQ8N6M9 145 aa13.3□□□□□ -0.28
GMDS-208ENST00000530927 PCNPQ8WW12 178 aaKnown RBP13.3□□□□□ -0.28
GMDS-208ENST00000530927 LINC00477Q96M19 166 aa13.3□□□□□ -0.28
GMDS-208ENST00000530927 PGPA6NDG6 321 aa13.29□□□□□ -0.28
GMDS-208ENST00000530927 KLLNB2CW77 178 aa13.29□□□□□ -0.28
GMDS-208ENST00000530927 RNASE4P34096 147 aaKnown RBP13.29□□□□□ -0.28
GMDS-208ENST00000530927 GNG5P63218 68 aa13.29□□□□□ -0.28
GMDS-208ENST00000530927 TMEM78Q5T7P6 136 aa13.29□□□□□ -0.28
GMDS-208ENST00000530927 LYPD6BQ8NI32 183 aa13.29□□□□□ -0.28
GMDS-208ENST00000530927 RNASE8Q8TDE3 154 aaKnown RBP13.29□□□□□ -0.28
GMDS-208ENST00000530927 ZNF492Q9P255 531 aa13.29□□□□□ -0.28
GMDS-208ENST00000530927 A0A1W2PRE2 83 aa13.28□□□□□ -0.28
GMDS-208ENST00000530927 C7orf71A4D174 169 aa13.28□□□□□ -0.28
GMDS-208ENST00000530927 DIRC3C9JPN6 131 aa13.28□□□□□ -0.28
GMDS-208ENST00000530927 DEFB130BP0DP73 79 aa13.28□□□□□ -0.28
GMDS-208ENST00000530927 DEFB130AP0DP74 79 aa13.28□□□□□ -0.28
GMDS-208ENST00000530927 DAD1P61803 113 aa13.28□□□□□ -0.28
GMDS-208ENST00000530927 CCL20P78556 96 aa13.28□□□□□ -0.28
GMDS-208ENST00000530927 OTORQ9NRC9 128 aa13.28□□□□□ -0.28
GMDS-208ENST00000530927 ZNF324O75467 553 aaPredicted RBP13.27□□□□□ -0.29
GMDS-208ENST00000530927 SLC25A5P05141 298 aaKnown RBP13.27□□□□□ -0.29
GMDS-208ENST00000530927 CSN1S1P47710 185 aa13.27□□□□□ -0.29
GMDS-208ENST00000530927 C16orf74Q96GX8 76 aa13.27□□□□□ -0.29
GMDS-208ENST00000530927 C20orf144Q9BQM9 153 aa13.27□□□□□ -0.29
GMDS-208ENST00000530927 NKX6-2Q9C056 277 aaPredicted RBP13.27□□□□□ -0.29
GMDS-208ENST00000530927 NOP10Q9NPE3 64 aaKnown RBP13.27□□□□□ -0.29
GMDS-208ENST00000530927 ARL2-SNX15V9GYD0 113 aa13.27□□□□□ -0.29
GMDS-208ENST00000530927 CRISP2P16562 243 aa13.26□□□□□ -0.29
GMDS-208ENST00000530927 ZNF138P52744 262 aa13.26□□□□□ -0.29
GMDS-208ENST00000530927 UBE2G2P60604 165 aa13.26□□□□□ -0.29
GMDS-208ENST00000530927 TMEM263Q8WUH6 116 aaKnown RBP13.26□□□□□ -0.29
GMDS-208ENST00000530927 MANBALQ9NQG1 85 aa13.26□□□□□ -0.29
GMDS-208ENST00000530927 FAM74A7A6NL05 159 aa13.25□□□□□ -0.29
GMDS-208ENST00000530927 IFNA1P01562 189 aa13.25□□□□□ -0.29
GMDS-208ENST00000530927 GPX1P07203 203 aa13.25□□□□□ -0.29
GMDS-208ENST00000530927 RXFP4Q8TDU9 374 aa13.25□□□□□ -0.29
GMDS-208ENST00000530927 SGK494Q96LW2 274 aa13.25□□□□□ -0.29
GMDS-208ENST00000530927 GNG13Q9P2W3 67 aa13.25□□□□□ -0.29
GMDS-208ENST00000530927 TRAV8-1A0A0A6YYK1 113 aa13.24□□□□□ -0.29
GMDS-208ENST00000530927 TEX48A0A1B0GUV7 120 aa13.24□□□□□ -0.29
GMDS-208ENST00000530927 PAGE4O60829 102 aa13.24□□□□□ -0.29
GMDS-208ENST00000530927 SUMO1P63165 101 aaKnown RBP13.24□□□□□ -0.29
GMDS-208ENST00000530927 GOLT1AQ6ZVE7 132 aa13.24□□□□□ -0.29
GMDS-208ENST00000530927 TP53TG3Q9ULZ0 132 aa13.24□□□□□ -0.29
GMDS-208ENST00000530927 RBAKDNA6NC62 111 aa13.23□□□□□ -0.29
GMDS-208ENST00000530927 LYRM9A8MSI8 78 aa13.23□□□□□ -0.29
GMDS-208ENST00000530927 CST9LP1Q5W188 147 aa13.23□□□□□ -0.29
GMDS-208ENST00000530927 ARL6IP6Q8N6S5 226 aa13.23□□□□□ -0.29
GMDS-208ENST00000530927 CMTM2Q8TAZ6 248 aa13.23□□□□□ -0.29
GMDS-208ENST00000530927 TIMM8BQ9Y5J9 83 aaPredicted RBP13.23□□□□□ -0.29
GMDS-208ENST00000530927 GGTLC3B5MD39 225 aa13.22□□□□□ -0.29
GMDS-208ENST00000530927 TAGLN2P37802 199 aaKnown RBP13.22□□□□□ -0.29
GMDS-208ENST00000530927 LGALS9CQ6DKI2 356 aa13.22□□□□□ -0.29
GMDS-208ENST00000530927 TVP23CQ96ET8 276 aa13.22□□□□□ -0.29
GMDS-208ENST00000530927 PYGO2Q9BRQ0 406 aa13.22□□□□□ -0.29
GMDS-208ENST00000530927 TMEM88Q6PEY1 159 aa13.22□□□□□ -0.29
GMDS-208ENST00000530927 ZNF493Q6ZR52 646 aa13.22□□□□□ -0.29
GMDS-208ENST00000530927 C5orf17Q8NAS9 161 aa13.22□□□□□ -0.29
GMDS-208ENST00000530927 TXNDC17Q9BRA2 123 aa13.22□□□□□ -0.29
GMDS-208ENST00000530927 TCEAL7Q9BRU2 100 aa13.22□□□□□ -0.29
GMDS-208ENST00000530927 GSN-AS1Q9NRJ2 163 aa13.22□□□□□ -0.29
GMDS-208ENST00000530927 MUC21Q5SSG8 566 aa13.21□□□□□ -0.3
GMDS-208ENST00000530927 C11orf72Q8NBR9 251 aa13.21□□□□□ -0.3
GMDS-208ENST00000530927 CBY3A6NI87 242 aa13.2□□□□□ -0.3
GMDS-208ENST00000530927 F6UZH7 168 aa13.2□□□□□ -0.3
GMDS-208ENST00000530927 BCL2P10415 239 aa13.2□□□□□ -0.3
GMDS-208ENST00000530927 ATP5G3P48201 142 aa13.2□□□□□ -0.3
GMDS-208ENST00000530927 NDUFAF3Q9BU61 184 aa13.2□□□□□ -0.3
GMDS-208ENST00000530927 VAX2Q9UIW0 290 aa13.2□□□□□ -0.3
GMDS-208ENST00000530927 EPDR1Q9UM22 224 aa13.2□□□□□ -0.3
GMDS-208ENST00000530927 DNAH6Q9C0G6 4158 aa13.19□□□□□ -0.3
GMDS-208ENST00000530927 GAGE12BA1L429 117 aa13.19□□□□□ -0.3
GMDS-208ENST00000530927 RBFOX3A6NFN3 312 aa13.19□□□□□ -0.3
GMDS-208ENST00000530927 GAGE7O76087 117 aa13.19□□□□□ -0.3
GMDS-208ENST00000530927 GAGE12FP0CL80 117 aa13.19□□□□□ -0.3
GMDS-208ENST00000530927 GAGE12GP0CL81 117 aa13.19□□□□□ -0.3
GMDS-208ENST00000530927 GAGE12IP0CL82 117 aa13.19□□□□□ -0.3
GMDS-208ENST00000530927 TCTAP57738 103 aa13.19□□□□□ -0.3
GMDS-208ENST00000530927 KLF12Q9Y4X4 402 aa13.19□□□□□ -0.3
GMDS-208ENST00000530927 SERTM2A0A1B0GWG4 89 aa13.18□□□□□ -0.3
GMDS-208ENST00000530927 SNURFLB1AK76 121 aa13.18□□□□□ -0.3
GMDS-208ENST00000530927 TCRAP04437 139 aa13.18□□□□□ -0.3
GMDS-208ENST00000530927 MEF2BQ02080 365 aaPredicted RBP13.18□□□□□ -0.3
GMDS-208ENST00000530927 C10orf91Q5T1B1 145 aa13.18□□□□□ -0.3
GMDS-208ENST00000530927 Q6ZTI0 123 aa13.18□□□□□ -0.3
GMDS-208ENST00000530927 HIST1H2BAQ96A08 127 aa13.18□□□□□ -0.3
GMDS-208ENST00000530927 IGHV1OR15-1A0A075B7D0 117 aa13.17□□□□□ -0.3
GMDS-208ENST00000530927 TMEM218A2RU14 115 aa13.17□□□□□ -0.3
GMDS-208ENST00000530927 F5H768 121 aa13.17□□□□□ -0.3
GMDS-208ENST00000530927 K7EQM0 130 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms