RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 GLI3P10071 1580 aa0.98□□□□□ -2.25
SUB1-204ENST00000504016 KDM5CP41229 1560 aa0.98□□□□□ -2.25
SUB1-204ENST00000504016 CCDC88AQ3V6T2 1871 aa0.98□□□□□ -2.25
SUB1-204ENST00000504016 NUP210Q8TEM1 1887 aaPredicted RBP0.98□□□□□ -2.25
SUB1-204ENST00000504016 NUP98P52948 1817 aa0.98□□□□□ -2.25
SUB1-204ENST00000504016 CCDC88CQ9P219 2028 aa0.98□□□□□ -2.25
SUB1-204ENST00000504016 CEP152O94986 1710 aa0.98□□□□□ -2.25
SUB1-204ENST00000504016 NAIPQ13075 1403 aa0.98□□□□□ -2.25
SUB1-204ENST00000504016 POLEQ07864 2286 aa0.98□□□□□ -2.25
SUB1-204ENST00000504016 BAZ2BQ9UIF8 2168 aaKnown RBP0.97□□□□□ -2.25
SUB1-204ENST00000504016 TRBV20-1A0A075B6N2 111 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 PIGBOS1A0A0B4J2F0 54 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 LOC107984156A0A0G2JMH3 177 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 TRBV6-4A0A1B0GX49 114 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 FAM25AB3EWG3 89 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 FAM25CB3EWG5 89 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 FAM25GB3EWG6 89 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 C5orf67F2Z3F1 127 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 INE1O15225 51 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 NDUFA2O43678 99 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 EDF1O60869 148 aaKnown RBP0.97□□□□□ -2.25
SUB1-204ENST00000504016 IGLC6P0CF74 106 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 RNASE3P12724 160 aaKnown RBP0.97□□□□□ -2.25
SUB1-204ENST00000504016 RPS25P62851 125 aaKnown RBP0.97□□□□□ -2.25
SUB1-204ENST00000504016 MIR22HGQ0VDD5 57 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 GLYATL3Q5SZD4 288 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 LINC01545Q5VT33 79 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 Q5XG85 94 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 ATP11AUNQ6ZP68 121 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 ARL17AQ8IVW1 177 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 LINC00269Q8N2A0 174 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 ATP6V0E2Q8NHE4 81 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 OTOSQ8NHW6 89 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 PSMG3Q9BT73 122 aaPredicted RBP0.97□□□□□ -2.25
SUB1-204ENST00000504016 NIT2Q9NQR4 276 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 FKBP11Q9NYL4 201 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 TAS2R8Q9NYW2 309 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 COMMD3Q9UBI1 195 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 ERG28Q9UKR5 140 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 BOKQ9UMX3 212 aaPredicted RBP0.97□□□□□ -2.25
SUB1-204ENST00000504016 ANAPC1Q9H1A4 1944 aa0.97□□□□□ -2.25
SUB1-204ENST00000504016 SDK1Q7Z5N4 2213 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 FLG2Q5D862 2391 aaPredicted RBP0.96□□□□□ -2.26
SUB1-204ENST00000504016 LOC110117498A0A087WWA1 95 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 A0A1W2PPB8 328 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 A0A1W2PRS3 328 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 C9orf170A2RU37 121 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 KIR3DP1A8MWS1 328 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 RRAS2P62070 204 aaPredicted RBP0.96□□□□□ -2.26
SUB1-204ENST00000504016 SNRPD3P62318 126 aaKnown RBP0.96□□□□□ -2.26
SUB1-204ENST00000504016 SPCS2Q15005 226 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 NEDD8Q15843 81 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 WHAMMP3Q1A5X7 153 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 GDF5OSQ5U4N7 250 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 KRTAP26-1Q6PEX3 210 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 LINC00322Q6ZN03 302 aaPredicted RBP0.96□□□□□ -2.26
SUB1-204ENST00000504016 Q8N2B8 174 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 KCNRGQ8N5I3 272 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 PPDPFLQ8WWR9 84 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 ZC2HC1AQ96GY0 325 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 SPANXDQ9BXN6 97 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 RERGLQ9H628 205 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 TAF9BQ9HBM6 251 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 DNAJC15Q9Y5T4 150 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 UHRF1BP1LA0JNW5 1464 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 FAM135BQ49AJ0 1406 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 SCN3AQ9NY46 2000 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 ARFGEF3Q5TH69 2177 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 RFX7Q2KHR2 1363 aa0.96□□□□□ -2.26
SUB1-204ENST00000504016 WDR7Q9Y4E6 1490 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 MICAL3Q7RTP6 2002 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 TRBV6-7A0A0A0MS04 114 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 A0A0J9YY99 117 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 CCDC179H3BU77 68 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 M0R2P5 195 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 NPFFO15130 113 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 DNAL4O96015 105 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 APOC1P02654 83 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 GYPBP06028 91 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 PYYP10082 97 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 EMX2Q04743 252 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 RHOHQ15669 191 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 SPATA45Q537H7 98 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 CLLU1Q5K131 121 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 Q8TAT8 98 aa0.95□□□□□ -2.26
SUB1-204ENST00000504016 NOP16Q9Y3C1 178 aaKnown RBP0.95□□□□□ -2.26
SUB1-204ENST00000504016 INTS1Q8N201 2190 aaKnown RBP0.95□□□□□ -2.26
SUB1-204ENST00000504016 PCDH15Q96QU1 1955 aa0.94□□□□□ -2.26
SUB1-204ENST00000504016 A0A0G2JMM0 328 aa0.94□□□□□ -2.26
SUB1-204ENST00000504016 A6NIN4 97 aa0.94□□□□□ -2.26
SUB1-204ENST00000504016 B4DSR2 109 aa0.94□□□□□ -2.26
SUB1-204ENST00000504016 ZNF670-ZNF695F2Z2N8 137 aa0.94□□□□□ -2.26
SUB1-204ENST00000504016 JMJD7-PLA2G4BH0Y9G9 81 aa0.94□□□□□ -2.26
SUB1-204ENST00000504016 J3QLW9 94 aa0.94□□□□□ -2.26
SUB1-204ENST00000504016 CCL25O15444 150 aa0.94□□□□□ -2.26
SUB1-204ENST00000504016 CD3DP04234 171 aa0.94□□□□□ -2.26
SUB1-204ENST00000504016 CD14P08571 375 aa0.94□□□□□ -2.26
SUB1-204ENST00000504016 LINC00694P0DN24 101 aa0.94□□□□□ -2.26
SUB1-204ENST00000504016 PIPP12273 146 aaPredicted RBP0.94□□□□□ -2.26
SUB1-204ENST00000504016 POLR2JP52435 117 aaKnown RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms