RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CD3DP04234 171 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 RPL7P18124 248 aaKnown RBP0.33□□□□□ -2.36
PSPC1-205ENST00000497722 B2MP61769 119 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 SPINK13Q1W4C9 94 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 CCSMST1Q4G0I0 132 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 TMEM128Q5BJH2 165 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 SPINK6Q6UWN8 80 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 OR9Q1Q8NGQ5 310 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 NAT14Q8WUY8 206 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 CLEC2BQ92478 149 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 CIB3Q96Q77 187 aaPredicted RBP0.33□□□□□ -2.36
PSPC1-205ENST00000497722 LXNQ9BS40 222 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 LPAR5Q9H1C0 372 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 APCP25054 2843 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 UNC13AQ9UPW8 1703 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 SPTBP11277 2137 aa0.32□□□□□ -2.36
PSPC1-205ENST00000497722 FGD6Q6ZV73 1430 aa0.32□□□□□ -2.36
PSPC1-205ENST00000497722 PHGR1C9JFL3 82 aa0.32□□□□□ -2.36
PSPC1-205ENST00000497722 SMIM15Q7Z3B0 74 aa0.32□□□□□ -2.36
PSPC1-205ENST00000497722 DEFB132Q7Z7B7 95 aa0.32□□□□□ -2.36
PSPC1-205ENST00000497722 CCDC115Q96NT0 180 aa0.32□□□□□ -2.36
PSPC1-205ENST00000497722 NABP2Q9BQ15 211 aa0.32□□□□□ -2.36
PSPC1-205ENST00000497722 CBLN4Q9NTU7 201 aa0.32□□□□□ -2.36
PSPC1-205ENST00000497722 NDUFAF1Q9Y375 327 aa0.32□□□□□ -2.36
PSPC1-205ENST00000497722 MPC1Q9Y5U8 109 aa0.32□□□□□ -2.36
PSPC1-205ENST00000497722 BCORL1Q5H9F3 1711 aa0.32□□□□□ -2.36
PSPC1-205ENST00000497722 LOC285556D6RIA3 1793 aa0.32□□□□□ -2.36
PSPC1-205ENST00000497722 MED23Q9ULK4 1368 aa0.32□□□□□ -2.36
PSPC1-205ENST00000497722 PTPRGP23470 1445 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 ATG2AQ2TAZ0 1938 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 LOC107986453A0A1B0GWG9 222 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 H3BMG7 143 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 GYPBP06028 91 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 NBEAP1P0C6P0 100 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 CRYGSP22914 178 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 RPL22P35268 128 aaKnown RBP0.31□□□□□ -2.36
PSPC1-205ENST00000497722 RPS28P62857 69 aaKnown RBP0.31□□□□□ -2.36
PSPC1-205ENST00000497722 ASB16-AS1Q495Z4 193 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 SAMD13Q5VXD3 122 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 XAF1Q6GPH4 301 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 C10orf99Q6UWK7 81 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 TEX29Q8N6K0 151 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 TMEM229BQ8NBD8 167 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 OR5A2Q8NGI9 324 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 OR51A4Q8NGJ6 313 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 C19orf12Q9NSK7 152 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 KIDINS220Q9ULH0 1771 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 NAV3Q8IVL0 2385 aa0.31□□□□□ -2.36
PSPC1-205ENST00000497722 A0A1W2PPB8 328 aa0.3□□□□□ -2.36
PSPC1-205ENST00000497722 A0A1W2PRS3 328 aa0.3□□□□□ -2.36
PSPC1-205ENST00000497722 IFITM5A6NNB3 132 aa0.3□□□□□ -2.36
PSPC1-205ENST00000497722 KIR3DP1A8MWS1 328 aa0.3□□□□□ -2.36
PSPC1-205ENST00000497722 DNAJB13P59910 316 aa0.3□□□□□ -2.36
PSPC1-205ENST00000497722 Q5XG85 94 aa0.3□□□□□ -2.36
PSPC1-205ENST00000497722 TCTEX1D1Q8N7M0 179 aa0.3□□□□□ -2.36
PSPC1-205ENST00000497722 SKA2Q8WVK7 121 aaPredicted RBP0.3□□□□□ -2.36
PSPC1-205ENST00000497722 SELENOSQ9BQE4 189 aa0.3□□□□□ -2.36
PSPC1-205ENST00000497722 TRAPPC2LQ9UL33 140 aa0.3□□□□□ -2.36
PSPC1-205ENST00000497722 KDM5CP41229 1560 aa0.3□□□□□ -2.36
PSPC1-205ENST00000497722 DSPPQ9NZW4 1301 aa0.3□□□□□ -2.36
PSPC1-205ENST00000497722 OVOS2A0A0G2JMS6 1433 aa0.3□□□□□ -2.36
PSPC1-205ENST00000497722 TRPM7Q96QT4 1865 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.29□□□□□ -2.36
PSPC1-205ENST00000497722 A0A1B0GX51 115 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 TSTD3H0UI37 97 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 H0YJX3 145 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 FXYD1O00168 92 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 UQCRQO14949 82 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 IGF2P01344 180 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 HBDP02042 147 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 SLC25A4P12235 298 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 EVI2AP22794 236 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 LSM3P62310 102 aaKnown RBP0.29□□□□□ -2.36
PSPC1-205ENST00000497722 BLCAPP62952 87 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 OR8J3Q8NGG0 315 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 FKBP11Q9NYL4 201 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 MRPL35Q9NZE8 188 aaKnown RBP0.29□□□□□ -2.36
PSPC1-205ENST00000497722 GINS2Q9Y248 185 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 DLEC1Q9Y238 1755 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 MAP2P11137 1827 aaKnown RBP0.29□□□□□ -2.36
PSPC1-205ENST00000497722 ARHGAP31Q2M1Z3 1444 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 PLXNA2O75051 1894 aa0.29□□□□□ -2.36
PSPC1-205ENST00000497722 NBDYA0A0U1RRE5 68 aa0.28□□□□□ -2.36
PSPC1-205ENST00000497722 GNG14A0A1W2PPG7 69 aa0.28□□□□□ -2.36
PSPC1-205ENST00000497722 J3KT08 172 aa0.28□□□□□ -2.36
PSPC1-205ENST00000497722 LY6G6CO95867 125 aa0.28□□□□□ -2.36
PSPC1-205ENST00000497722 S100GP29377 79 aa0.28□□□□□ -2.36
PSPC1-205ENST00000497722 ETV6P41212 452 aa0.28□□□□□ -2.36
PSPC1-205ENST00000497722 CSAG1Q6PB30 78 aa0.28□□□□□ -2.36
PSPC1-205ENST00000497722 TAC4Q86UU9 113 aa0.28□□□□□ -2.36
PSPC1-205ENST00000497722 BRK1Q8WUW1 75 aa0.28□□□□□ -2.36
PSPC1-205ENST00000497722 ZDBF2Q9HCK1 2354 aa0.28□□□□□ -2.36
PSPC1-205ENST00000497722 CDK12Q9NYV4 1490 aaPredicted RBP0.28□□□□□ -2.37
PSPC1-205ENST00000497722 LRP5O75197 1615 aa0.27□□□□□ -2.37
PSPC1-205ENST00000497722 AFDNP55196 1824 aaKnown RBP0.27□□□□□ -2.37
PSPC1-205ENST00000497722 TRAV36DV7A0A075B6V5 113 aa0.27□□□□□ -2.37
PSPC1-205ENST00000497722 M0QZK8 103 aa0.27□□□□□ -2.37
PSPC1-205ENST00000497722 EDF1O60869 148 aaKnown RBP0.27□□□□□ -2.37
PSPC1-205ENST00000497722 SCTP09683 121 aa0.27□□□□□ -2.37
PSPC1-205ENST00000497722 GTF2A1P52655 376 aaPredicted RBP0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms