RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 CYSLTR1Q9Y271 337 aa11.09□□□□□ -0.63
RER1-207ENST00000488353 B9A039 149 aa11.09□□□□□ -0.63
RER1-207ENST00000488353 CRYGBP07316 175 aa11.09□□□□□ -0.63
RER1-207ENST00000488353 ADORA2A-AS1P86434 159 aa11.09□□□□□ -0.63
RER1-207ENST00000488353 HIST1H4GQ99525 98 aa11.09□□□□□ -0.63
RER1-207ENST00000488353 AAMDCQ9H7C9 122 aa11.09□□□□□ -0.63
RER1-207ENST00000488353 HRNRQ86YZ3 2850 aaPredicted RBP11.08□□□□□ -0.64
RER1-207ENST00000488353 TEX22C9J3V5 150 aa11.08□□□□□ -0.64
RER1-207ENST00000488353 FOXI1Q12951 378 aa11.08□□□□□ -0.64
RER1-207ENST00000488353 C8orf86Q6ZUL3 223 aa11.08□□□□□ -0.64
RER1-207ENST00000488353 C20orf78Q9BR46 151 aa11.08□□□□□ -0.64
RER1-207ENST00000488353 TMEM160Q9NX00 188 aa11.08□□□□□ -0.64
RER1-207ENST00000488353 RALYQ9UKM9 306 aaKnown RBP11.08□□□□□ -0.64
RER1-207ENST00000488353 IGKV1-17P01599 117 aa11.08□□□□□ -0.64
RER1-207ENST00000488353 COX8CQ7Z4L0 72 aa11.08□□□□□ -0.64
RER1-207ENST00000488353 MAPKAPK5-AS1Q8N8E1 139 aa11.08□□□□□ -0.64
RER1-207ENST00000488353 ITPR1Q14643 2758 aa11.07□□□□□ -0.64
RER1-207ENST00000488353 TRAV40A0A0B4J280 105 aa11.07□□□□□ -0.64
RER1-207ENST00000488353 BUB1B-PAK6H3BSN5 160 aa11.07□□□□□ -0.64
RER1-207ENST00000488353 LY6HO94772 140 aa11.07□□□□□ -0.64
RER1-207ENST00000488353 IGLV1-47P01700 117 aa11.07□□□□□ -0.64
RER1-207ENST00000488353 KLRD1Q13241 179 aa11.07□□□□□ -0.64
RER1-207ENST00000488353 PDE6HQ13956 83 aa11.07□□□□□ -0.64
RER1-207ENST00000488353 ATP6V0E2Q8NHE4 81 aa11.07□□□□□ -0.64
RER1-207ENST00000488353 RNF185Q96GF1 192 aa11.07□□□□□ -0.64
RER1-207ENST00000488353 I3L2K1 104 aa11.07□□□□□ -0.64
RER1-207ENST00000488353 TNFRSF6BO95407 300 aa11.07□□□□□ -0.64
RER1-207ENST00000488353 EGR2P11161 476 aaPredicted RBP11.07□□□□□ -0.64
RER1-207ENST00000488353 LY6DQ14210 128 aa11.07□□□□□ -0.64
RER1-207ENST00000488353 SYT8Q8NBV8 401 aa11.07□□□□□ -0.64
RER1-207ENST00000488353 S4R3C0 116 aa11.07□□□□□ -0.64
RER1-207ENST00000488353 MRPS12O15235 138 aaKnown RBP11.06□□□□□ -0.64
RER1-207ENST00000488353 SPINK8P0C7L1 97 aa11.06□□□□□ -0.64
RER1-207ENST00000488353 IGLC6P0CF74 106 aa11.06□□□□□ -0.64
RER1-207ENST00000488353 TMEM158Q8WZ71 300 aa11.06□□□□□ -0.64
RER1-207ENST00000488353 RPEQ96AT9 228 aa11.06□□□□□ -0.64
RER1-207ENST00000488353 C1QTNF4Q9BXJ3 329 aa11.06□□□□□ -0.64
RER1-207ENST00000488353 CNIH1O95406 144 aa11.06□□□□□ -0.64
RER1-207ENST00000488353 FBXL19-AS1Q494R0 122 aa11.05□□□□□ -0.64
RER1-207ENST00000488353 ZNF491Q8N8L2 437 aa11.05□□□□□ -0.64
RER1-207ENST00000488353 CDIP1Q9H305 208 aa11.05□□□□□ -0.64
RER1-207ENST00000488353 MRPL35Q9NZE8 188 aaKnown RBP11.05□□□□□ -0.64
RER1-207ENST00000488353 HIVEP3Q5T1R4 2406 aa11.05□□□□□ -0.64
RER1-207ENST00000488353 NCBP2LA6PVI3 153 aaKnown RBP11.04□□□□□ -0.64
RER1-207ENST00000488353 ZNF672Q499Z4 452 aaPredicted RBP11.04□□□□□ -0.64
RER1-207ENST00000488353 RNF125Q96EQ8 232 aa11.04□□□□□ -0.64
RER1-207ENST00000488353 PRR25Q96S07 402 aa11.04□□□□□ -0.64
RER1-207ENST00000488353 TRBV7-3A0A075B6L6 115 aa11.04□□□□□ -0.64
RER1-207ENST00000488353 LINC01619G3V211 115 aa11.04□□□□□ -0.64
RER1-207ENST00000488353 LCNL1Q6ZST4 164 aa11.04□□□□□ -0.64
RER1-207ENST00000488353 MYOZ3Q8TDC0 251 aa11.04□□□□□ -0.64
RER1-207ENST00000488353 CNFNQ9BYD5 112 aa11.04□□□□□ -0.64
RER1-207ENST00000488353 MSRB1Q9NZV6 116 aa11.04□□□□□ -0.64
RER1-207ENST00000488353 ONECUT1Q9UBC0 465 aa11.04□□□□□ -0.64
RER1-207ENST00000488353 HOXA3O43365 443 aaPredicted RBP11.03□□□□□ -0.64
RER1-207ENST00000488353 GAS8-AS1O95177 125 aa11.03□□□□□ -0.64
RER1-207ENST00000488353 Q8N8P6 123 aa11.03□□□□□ -0.64
RER1-207ENST00000488353 ASH1LQ9NR48 2969 aaKnown RBP11.03□□□□□ -0.64
RER1-207ENST00000488353 TSPAN13O95857 204 aa11.03□□□□□ -0.64
RER1-207ENST00000488353 IL4P05112 153 aa11.03□□□□□ -0.64
RER1-207ENST00000488353 CFAP126Q5VTH2 177 aa11.03□□□□□ -0.64
RER1-207ENST00000488353 OR11H12B2RN74 326 aa11.02□□□□□ -0.64
RER1-207ENST00000488353 PPIFP30405 207 aaKnown RBP11.02□□□□□ -0.64
RER1-207ENST00000488353 OR11H1Q8NG94 326 aa11.02□□□□□ -0.64
RER1-207ENST00000488353 OR11H2Q8NH07 326 aa11.02□□□□□ -0.64
RER1-207ENST00000488353 A0A087WX48 190 aa11.02□□□□□ -0.65
RER1-207ENST00000488353 TIMM23O14925 209 aa11.02□□□□□ -0.65
RER1-207ENST00000488353 PLNP26678 52 aa11.02□□□□□ -0.65
RER1-207ENST00000488353 SRSF2Q01130 221 aaKnown RBP11.02□□□□□ -0.65
RER1-207ENST00000488353 DLX4Q92988 240 aaPredicted RBP11.02□□□□□ -0.65
RER1-207ENST00000488353 COL12A1Q99715 3063 aa11.02□□□□□ -0.65
RER1-207ENST00000488353 MORN3Q6PF18 240 aaPredicted RBP11.01□□□□□ -0.65
RER1-207ENST00000488353 WNK2Q9Y3S1 2297 aa11.01□□□□□ -0.65
RER1-207ENST00000488353 SVEP1Q4LDE5 3571 aa11.01□□□□□ -0.65
RER1-207ENST00000488353 IGLV2-18A0A075B6J9 118 aa11.01□□□□□ -0.65
RER1-207ENST00000488353 IGKV2-40A0A087WW87 121 aaPredicted RBP11.01□□□□□ -0.65
RER1-207ENST00000488353 K7EIM0 57 aa11.01□□□□□ -0.65
RER1-207ENST00000488353 IGKV2D-40P01614 121 aaPredicted RBP11.01□□□□□ -0.65
RER1-207ENST00000488353 MT-ATP8P03928 68 aa11.01□□□□□ -0.65
RER1-207ENST00000488353 ZNF80P51504 273 aaPredicted RBP11.01□□□□□ -0.65
RER1-207ENST00000488353 Q6ZUT4 128 aa11.01□□□□□ -0.65
RER1-207ENST00000488353 ORM1P02763 201 aa11□□□□□ -0.65
RER1-207ENST00000488353 NFE4Q86UQ8 179 aa11□□□□□ -0.65
RER1-207ENST00000488353 ZNF575Q86XF7 245 aa11□□□□□ -0.65
RER1-207ENST00000488353 AKAP6Q13023 2319 aa11□□□□□ -0.65
RER1-207ENST00000488353 MED13LQ71F56 2210 aa11□□□□□ -0.65
RER1-207ENST00000488353 SMCPP49901 116 aaPredicted RBP11□□□□□ -0.65
RER1-207ENST00000488353 C5orf64Q2M2E5 130 aa11□□□□□ -0.65
RER1-207ENST00000488353 VCX2Q9H322 139 aa11□□□□□ -0.65
RER1-207ENST00000488353 PGPEP1Q9NXJ5 209 aa11□□□□□ -0.65
RER1-207ENST00000488353 ERG28Q9UKR5 140 aa11□□□□□ -0.65
RER1-207ENST00000488353 MYMXA0A1B0GTQ4 84 aa10.99□□□□□ -0.65
RER1-207ENST00000488353 NDUFA3O95167 84 aa10.99□□□□□ -0.65
RER1-207ENST00000488353 GATA1P15976 413 aaPredicted RBP10.99□□□□□ -0.65
RER1-207ENST00000488353 LAGE3Q14657 143 aa10.99□□□□□ -0.65
RER1-207ENST00000488353 DTX2Q86UW9 622 aa10.99□□□□□ -0.65
RER1-207ENST00000488353 XGP55808 180 aa10.99□□□□□ -0.65
RER1-207ENST00000488353 SRSF8Q9BRL6 282 aaKnown RBP10.99□□□□□ -0.65
RER1-207ENST00000488353 FABP5P3A8MUU1 101 aa10.98□□□□□ -0.65
RER1-207ENST00000488353 LY6LH3BQJ8 138 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms