RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SYNJ2BPP57105 145 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 B2MP61769 119 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 SERF2P84101 59 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 ZNF90Q03938 601 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 AKR1C8PQ5T2L2 129 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 C10orf113Q5VZT2 155 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 LAMTOR1Q6IAA8 161 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 TOMM20LQ6UXN7 152 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 GPHB5Q86YW7 130 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 ARL6IP6Q8N6S5 226 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 C15orf54Q8N8G6 183 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 DYNLRB2Q8TF09 96 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 METTL26Q96S19 204 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 PSMG3Q9BT73 122 aaPredicted RBP2.59□□□□□ -1.99
UBR3-209ENST00000477461 RSG1Q9BU20 258 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 GGTLC1Q9BX51 225 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 CYTL1Q9NRR1 136 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 SLC39A9Q9NUM3 307 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 MRPL36Q9P0J6 103 aaKnown RBP2.59□□□□□ -1.99
UBR3-209ENST00000477461 DOK5Q9P104 306 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 RABAC1Q9UI14 185 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 HIGD1AQ9Y241 93 aa2.59□□□□□ -1.99
UBR3-209ENST00000477461 PUS1Q9Y606 427 aaKnown RBP eCLIP2.59□□□□□ -1.99
UBR3-209ENST00000477461 IGKV1D-37A0A075B6S9 117 aa2.58□□□□□ -2
UBR3-209ENST00000477461 IGHV1OR15-1A0A075B7D0 117 aa2.58□□□□□ -2
UBR3-209ENST00000477461 IGHV3OR16-8A0A075B7F1 116 aa2.58□□□□□ -2
UBR3-209ENST00000477461 IGHV7-4-1A0A0J9YVY3 117 aa2.58□□□□□ -2
UBR3-209ENST00000477461 UMAD1C9J7I0 102 aa2.58□□□□□ -2
UBR3-209ENST00000477461 TEX46H3BTG2 121 aa2.58□□□□□ -2
UBR3-209ENST00000477461 K7EMT4 169 aa2.58□□□□□ -2
UBR3-209ENST00000477461 LGALS9O00182 355 aa2.58□□□□□ -2
UBR3-209ENST00000477461 ZNF207O43670 478 aaKnown RBP2.58□□□□□ -2
UBR3-209ENST00000477461 IFNA7P01567 189 aa2.58□□□□□ -2
UBR3-209ENST00000477461 M6PRP20645 277 aa2.58□□□□□ -2
UBR3-209ENST00000477461 CDC34P49427 236 aaPredicted RBP2.58□□□□□ -2
UBR3-209ENST00000477461 TAS2R45P59539 299 aa2.58□□□□□ -2
UBR3-209ENST00000477461 RAB2AP61019 212 aa2.58□□□□□ -2
UBR3-209ENST00000477461 RHOBP62745 196 aa2.58□□□□□ -2
UBR3-209ENST00000477461 TMEM41BQ5BJD5 291 aa2.58□□□□□ -2
UBR3-209ENST00000477461 FAM78BQ5VT40 261 aa2.58□□□□□ -2
UBR3-209ENST00000477461 LINC00305Q7Z4B0 112 aa2.58□□□□□ -2
UBR3-209ENST00000477461 IQCF2Q8IXL9 164 aa2.58□□□□□ -2
UBR3-209ENST00000477461 OR10G4Q8NGN3 311 aa2.58□□□□□ -2
UBR3-209ENST00000477461 OR10G9Q8NGN4 311 aa2.58□□□□□ -2
UBR3-209ENST00000477461 OR9G4Q8NGQ1 327 aa2.58□□□□□ -2
UBR3-209ENST00000477461 STOML3Q8TAV4 291 aa2.58□□□□□ -2
UBR3-209ENST00000477461 MARC2Q969Z3 335 aa2.58□□□□□ -2
UBR3-209ENST00000477461 GPR82Q96P67 336 aa2.58□□□□□ -2
UBR3-209ENST00000477461 MRPL32Q9BYC8 188 aaKnown RBP2.58□□□□□ -2
UBR3-209ENST00000477461 ACTR3CQ9C0K3 210 aaPredicted RBP2.58□□□□□ -2
UBR3-209ENST00000477461 SH3BGRL3Q9H299 93 aa2.58□□□□□ -2
UBR3-209ENST00000477461 ARV1Q9H2C2 271 aa2.58□□□□□ -2
UBR3-209ENST00000477461 SLC25A22Q9H936 323 aa2.58□□□□□ -2
UBR3-209ENST00000477461 DAZ1Q9NQZ3 744 aaKnown RBP2.58□□□□□ -2
UBR3-209ENST00000477461 MRPL27Q9P0M9 148 aaKnown RBP2.58□□□□□ -2
UBR3-209ENST00000477461 IGHV3OR16-13A0A075B7E8 117 aa2.57□□□□□ -2
UBR3-209ENST00000477461 IGHV3-49A0A0A0MS15 119 aa2.57□□□□□ -2
UBR3-209ENST00000477461 IGHV3-74A0A0B4J1X5 117 aa2.57□□□□□ -2
UBR3-209ENST00000477461 IGHV3-66A0A0C4DH42 116 aa2.57□□□□□ -2
UBR3-209ENST00000477461 LOC100131303A0A0U1RQF7 123 aa2.57□□□□□ -2
UBR3-209ENST00000477461 CTXND1A0A1B0GTU2 59 aa2.57□□□□□ -2
UBR3-209ENST00000477461 HELTA6NFD8 242 aa2.57□□□□□ -2
UBR3-209ENST00000477461 C2orf70A6NJV1 201 aa2.57□□□□□ -2
UBR3-209ENST00000477461 ZNF98A6NK75 572 aa2.57□□□□□ -2
UBR3-209ENST00000477461 ZNF705EA8MWA4 302 aaPredicted RBP2.57□□□□□ -2
UBR3-209ENST00000477461 A8MWP6 167 aa2.57□□□□□ -2
UBR3-209ENST00000477461 SEC14L6B5MCN3 397 aa2.57□□□□□ -2
UBR3-209ENST00000477461 H3BRN7 92 aa2.57□□□□□ -2
UBR3-209ENST00000477461 DNASE2O00115 360 aaPredicted RBP2.57□□□□□ -2
UBR3-209ENST00000477461 OR7C2O60412 319 aa2.57□□□□□ -2
UBR3-209ENST00000477461 CD5P06127 495 aa2.57□□□□□ -2
UBR3-209ENST00000477461 C8orf88P0DMB2 117 aa2.57□□□□□ -2
UBR3-209ENST00000477461 RPL7P18124 248 aaKnown RBP2.57□□□□□ -2
UBR3-209ENST00000477461 CRYBB3P26998 211 aa2.57□□□□□ -2
UBR3-209ENST00000477461 GALR1P47211 349 aa2.57□□□□□ -2
UBR3-209ENST00000477461 RAB5CP51148 216 aa2.57□□□□□ -2
UBR3-209ENST00000477461 HNRNPA3P51991 378 aaKnown RBP2.57□□□□□ -2
UBR3-209ENST00000477461 PLP1P60201 277 aa2.57□□□□□ -2
UBR3-209ENST00000477461 RAB14P61106 215 aa2.57□□□□□ -2
UBR3-209ENST00000477461 PAFAH1B2P68402 229 aa2.57□□□□□ -2
UBR3-209ENST00000477461 USF2Q15853 346 aaPredicted RBP2.57□□□□□ -2
UBR3-209ENST00000477461 KHDC3LQ587J8 217 aa2.57□□□□□ -2
UBR3-209ENST00000477461 GCSAMLQ5JQS6 135 aa2.57□□□□□ -2
UBR3-209ENST00000477461 ALKAL2Q6UX46 152 aa2.57□□□□□ -2
UBR3-209ENST00000477461 UNQ9165/PRO28630Q6UXU0 137 aa2.57□□□□□ -2
UBR3-209ENST00000477461 DPPA3Q6W0C5 159 aa2.57□□□□□ -2
UBR3-209ENST00000477461 ERASQ7Z444 233 aa2.57□□□□□ -2
UBR3-209ENST00000477461 BPIFA4PQ86YQ2 179 aa2.57□□□□□ -2
UBR3-209ENST00000477461 OR8I2Q8N0Y5 310 aa2.57□□□□□ -2
UBR3-209ENST00000477461 STXBP6Q8NFX7 210 aa2.57□□□□□ -2
UBR3-209ENST00000477461 FAM213BQ8TBF2 198 aa2.57□□□□□ -2
UBR3-209ENST00000477461 LRRC20Q8TCA0 184 aa2.57□□□□□ -2
UBR3-209ENST00000477461 SHANK2-AS3Q9BTD1 123 aa2.57□□□□□ -2
UBR3-209ENST00000477461 RHPN1-AS1Q9BWJ2 59 aa2.57□□□□□ -2
UBR3-209ENST00000477461 SLC25A39Q9BZJ4 359 aaPredicted RBP2.57□□□□□ -2
UBR3-209ENST00000477461 GPR61Q9BZJ8 451 aa2.57□□□□□ -2
UBR3-209ENST00000477461 SMPXQ9UHP9 88 aa2.57□□□□□ -2
UBR3-209ENST00000477461 FUT9Q9Y231 359 aa2.57□□□□□ -2
UBR3-209ENST00000477461 RFNGQ9Y644 331 aa2.57□□□□□ -2
UBR3-209ENST00000477461 CSMD2Q7Z408 3487 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms