RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 DYDC1Q8WWB3 177 aa-0.13□□□□□ -2.43
MDM2-216ENST00000471946 BBIP1A8MTZ0 92 aa-0.14□□□□□ -2.43
MDM2-216ENST00000471946 FXYD1O00168 92 aa-0.14□□□□□ -2.43
MDM2-216ENST00000471946 MAXP61244 160 aa-0.14□□□□□ -2.43
MDM2-216ENST00000471946 C3orf62Q6ZUJ4 267 aa-0.14□□□□□ -2.43
MDM2-216ENST00000471946 TCTEX1D1Q8N7M0 179 aa-0.14□□□□□ -2.43
MDM2-216ENST00000471946 PRELID3AQ96N28 172 aa-0.14□□□□□ -2.43
MDM2-216ENST00000471946 MRPL35Q9NZE8 188 aaKnown RBP-0.14□□□□□ -2.43
MDM2-216ENST00000471946 NUBP2Q9Y5Y2 271 aa-0.14□□□□□ -2.43
MDM2-216ENST00000471946 FAM135BQ49AJ0 1406 aa-0.14□□□□□ -2.43
MDM2-216ENST00000471946 ABCA12Q86UK0 2595 aa-0.14□□□□□ -2.43
MDM2-216ENST00000471946 ABCA1O95477 2261 aa-0.15□□□□□ -2.43
MDM2-216ENST00000471946 POLQO75417 2590 aa-0.15□□□□□ -2.43
MDM2-216ENST00000471946 WDR97A6NE52 1622 aa-0.15□□□□□ -2.43
MDM2-216ENST00000471946 PLXNA2O75051 1894 aa-0.15□□□□□ -2.43
MDM2-216ENST00000471946 LOC101927531A0A1B0GV80 90 aa-0.15□□□□□ -2.43
MDM2-216ENST00000471946 A0A1W2PPB8 328 aa-0.15□□□□□ -2.43
MDM2-216ENST00000471946 ARL5CA6NH57 179 aa-0.15□□□□□ -2.43
MDM2-216ENST00000471946 KIR3DP1A8MWS1 328 aa-0.15□□□□□ -2.43
MDM2-216ENST00000471946 STX19Q8N4C7 294 aa-0.15□□□□□ -2.43
MDM2-216ENST00000471946 ISOC1Q96CN7 298 aa-0.15□□□□□ -2.43
MDM2-216ENST00000471946 FKBP11Q9NYL4 201 aa-0.15□□□□□ -2.43
MDM2-216ENST00000471946 LAMTOR3Q9UHA4 124 aa-0.15□□□□□ -2.43
MDM2-216ENST00000471946 LOC107984156A0A0G2JMH3 177 aa-0.16□□□□□ -2.44
MDM2-216ENST00000471946 SAA1P0DJI8 122 aaPredicted RBP-0.16□□□□□ -2.44
MDM2-216ENST00000471946 TPT1P13693 172 aaKnown RBP-0.16□□□□□ -2.44
MDM2-216ENST00000471946 SERPINB1P30740 379 aa-0.16□□□□□ -2.44
MDM2-216ENST00000471946 SDC2P34741 201 aa-0.16□□□□□ -2.44
MDM2-216ENST00000471946 BASP1P80723 227 aaKnown RBP-0.16□□□□□ -2.44
MDM2-216ENST00000471946 DEFB132Q7Z7B7 95 aa-0.16□□□□□ -2.44
MDM2-216ENST00000471946 ARL17AQ8IVW1 177 aa-0.16□□□□□ -2.44
MDM2-216ENST00000471946 BIN3Q9NQY0 253 aa-0.16□□□□□ -2.44
MDM2-216ENST00000471946 LRP5O75197 1615 aa-0.16□□□□□ -2.44
MDM2-216ENST00000471946 TEX29Q8N6K0 151 aa-0.17□□□□□ -2.44
MDM2-216ENST00000471946 PROK2Q9HC23 129 aa-0.17□□□□□ -2.44
MDM2-216ENST00000471946 HELZP42694 1942 aaKnown RBP-0.17□□□□□ -2.44
MDM2-216ENST00000471946 CELSR1Q9NYQ6 3014 aa-0.18□□□□□ -2.44
MDM2-216ENST00000471946 KIDINS220Q9ULH0 1771 aa-0.18□□□□□ -2.44
MDM2-216ENST00000471946 EDF1O60869 148 aaKnown RBP-0.18□□□□□ -2.44
MDM2-216ENST00000471946 IGF2P01344 180 aa-0.18□□□□□ -2.44
MDM2-216ENST00000471946 S100A11P31949 105 aa-0.18□□□□□ -2.44
MDM2-216ENST00000471946 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.18□□□□□ -2.44
MDM2-216ENST00000471946 TMEM229BQ8NBD8 167 aa-0.18□□□□□ -2.44
MDM2-216ENST00000471946 MRPL36Q9P0J6 103 aaKnown RBP-0.18□□□□□ -2.44
MDM2-216ENST00000471946 COMMD3Q9UBI1 195 aa-0.18□□□□□ -2.44
MDM2-216ENST00000471946 KDM5CP41229 1560 aa-0.19□□□□□ -2.44
MDM2-216ENST00000471946 JMJD1CQ15652 2540 aa-0.19□□□□□ -2.44
MDM2-216ENST00000471946 XIRP1Q702N8 1843 aaKnown RBP-0.19□□□□□ -2.44
MDM2-216ENST00000471946 DMBT1Q9UGM3 2413 aaPredicted RBP-0.19□□□□□ -2.44
MDM2-216ENST00000471946 LOC107986453A0A1B0GWG9 222 aa-0.19□□□□□ -2.44
MDM2-216ENST00000471946 CDC42EP2O14613 210 aa-0.19□□□□□ -2.44
MDM2-216ENST00000471946 BCL2P10415 239 aa-0.19□□□□□ -2.44
MDM2-216ENST00000471946 DNAJB13P59910 316 aa-0.19□□□□□ -2.44
MDM2-216ENST00000471946 OR8J3Q8NGG0 315 aa-0.19□□□□□ -2.44
MDM2-216ENST00000471946 GID8Q9NWU2 228 aa-0.19□□□□□ -2.44
MDM2-216ENST00000471946 MPC1Q9Y5U8 109 aa-0.19□□□□□ -2.44
MDM2-216ENST00000471946 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.19□□□□□ -2.44
MDM2-216ENST00000471946 TMEM30CPA0ZSE6 113 aa-0.2□□□□□ -2.44
MDM2-216ENST00000471946 TMEM238C9JI98 176 aa-0.2□□□□□ -2.44
MDM2-216ENST00000471946 IGKCP01834 107 aa-0.2□□□□□ -2.44
MDM2-216ENST00000471946 CRYBA4P53673 196 aa-0.2□□□□□ -2.44
MDM2-216ENST00000471946 C3orf33Q6P1S2 294 aa-0.2□□□□□ -2.44
MDM2-216ENST00000471946 DCUN1D2Q6PH85 259 aa-0.2□□□□□ -2.44
MDM2-216ENST00000471946 LINC00305Q7Z4B0 112 aa-0.2□□□□□ -2.44
MDM2-216ENST00000471946 MORN4Q8NDC4 146 aa-0.2□□□□□ -2.44
MDM2-216ENST00000471946 OR51A4Q8NGJ6 313 aa-0.2□□□□□ -2.44
MDM2-216ENST00000471946 TRBV27A0A0K0K1C4 114 aa-0.21□□□□□ -2.44
MDM2-216ENST00000471946 MAP1LC3B2A6NCE7 125 aa-0.21□□□□□ -2.44
MDM2-216ENST00000471946 HIGD1CA8MV81 97 aa-0.21□□□□□ -2.44
MDM2-216ENST00000471946 TPST1O60507 370 aa-0.21□□□□□ -2.44
MDM2-216ENST00000471946 IL7P13232 177 aa-0.21□□□□□ -2.44
MDM2-216ENST00000471946 CCSMST1Q4G0I0 132 aa-0.21□□□□□ -2.44
MDM2-216ENST00000471946 STX12Q86Y82 276 aa-0.21□□□□□ -2.44
MDM2-216ENST00000471946 CDC26Q8NHZ8 85 aa-0.21□□□□□ -2.44
MDM2-216ENST00000471946 PBRM1Q86U86 1689 aa-0.21□□□□□ -2.44
MDM2-216ENST00000471946 ROCK1Q13464 1354 aa-0.21□□□□□ -2.44
MDM2-216ENST00000471946 CELSR2Q9HCU4 2923 aa-0.21□□□□□ -2.44
MDM2-216ENST00000471946 BLMP54132 1417 aaPredicted RBP-0.21□□□□□ -2.44
MDM2-216ENST00000471946 PPP5D1E7EU14 171 aa-0.22□□□□□ -2.44
MDM2-216ENST00000471946 LYPD5Q6UWN5 251 aa-0.22□□□□□ -2.44
MDM2-216ENST00000471946 HRCT1Q6UXD1 115 aa-0.22□□□□□ -2.44
MDM2-216ENST00000471946 BOLA2Q9H3K6 86 aa-0.22□□□□□ -2.44
MDM2-216ENST00000471946 LAMTOR2Q9Y2Q5 125 aa-0.22□□□□□ -2.44
MDM2-216ENST00000471946 MED13LQ71F56 2210 aa-0.23□□□□□ -2.45
MDM2-216ENST00000471946 ASXL3Q9C0F0 2248 aa-0.23□□□□□ -2.45
MDM2-216ENST00000471946 UBR5O95071 2799 aaPredicted RBP-0.23□□□□□ -2.45
MDM2-216ENST00000471946 TRAV13-1A0A0B4J241 112 aa-0.23□□□□□ -2.45
MDM2-216ENST00000471946 SLC25A4P12235 298 aa-0.23□□□□□ -2.45
MDM2-216ENST00000471946 GTF2A1P52655 376 aaPredicted RBP-0.23□□□□□ -2.45
MDM2-216ENST00000471946 IQCJQ1A5X6 159 aa-0.23□□□□□ -2.45
MDM2-216ENST00000471946 TMEM78Q5T7P6 136 aa-0.23□□□□□ -2.45
MDM2-216ENST00000471946 TRIQKQ629K1 86 aa-0.23□□□□□ -2.45
MDM2-216ENST00000471946 DMAC1Q96GE9 116 aa-0.23□□□□□ -2.45
MDM2-216ENST00000471946 C19orf12Q9NSK7 152 aa-0.23□□□□□ -2.45
MDM2-216ENST00000471946 TMEM14BQ9NUH8 114 aa-0.23□□□□□ -2.45
MDM2-216ENST00000471946 PLXNA1Q9UIW2 1896 aa-0.23□□□□□ -2.45
MDM2-216ENST00000471946 CPDO75976 1380 aa-0.23□□□□□ -2.45
MDM2-216ENST00000471946 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.24□□□□□ -2.45
MDM2-216ENST00000471946 TMEM189A5PLL7 270 aa-0.24□□□□□ -2.45
MDM2-216ENST00000471946 IFITM5A6NNB3 132 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 222.7 ms