RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 C11orf52Q96A22 123 aa9.14□□□□□ -0.95
SPTLC1-204ENST00000469778 WWC2-AS2Q96NR7 200 aa9.14□□□□□ -0.95
SPTLC1-204ENST00000469778 EDA2RQ9HAV5 297 aa9.14□□□□□ -0.95
SPTLC1-204ENST00000469778 RETNQ9HD89 108 aa9.14□□□□□ -0.95
SPTLC1-204ENST00000469778 TGP01266 2768 aa9.14□□□□□ -0.95
SPTLC1-204ENST00000469778 TRAV8-1A0A0A6YYK1 113 aa9.13□□□□□ -0.95
SPTLC1-204ENST00000469778 TRAV12-3A0A0B4J271 114 aa9.13□□□□□ -0.95
SPTLC1-204ENST00000469778 TRAV21A0A0B4J279 112 aa9.13□□□□□ -0.95
SPTLC1-204ENST00000469778 RBFOX3A6NFN3 312 aa9.13□□□□□ -0.95
SPTLC1-204ENST00000469778 AKR1C3P42330 323 aa9.13□□□□□ -0.95
SPTLC1-204ENST00000469778 ATP5G3P48201 142 aa9.13□□□□□ -0.95
SPTLC1-204ENST00000469778 SMUG1Q53HV7 270 aa9.13□□□□□ -0.95
SPTLC1-204ENST00000469778 PRNTQ86SH4 94 aa9.13□□□□□ -0.95
SPTLC1-204ENST00000469778 Q8TAT8 98 aa9.13□□□□□ -0.95
SPTLC1-204ENST00000469778 SMDT1Q9H4I9 107 aa9.13□□□□□ -0.95
SPTLC1-204ENST00000469778 IGHV3OR16-12A0A075B7B8 117 aa9.12□□□□□ -0.95
SPTLC1-204ENST00000469778 TMEM250H0YL14 139 aa9.12□□□□□ -0.95
SPTLC1-204ENST00000469778 ANXA2RQ3ZCQ2 193 aa9.12□□□□□ -0.95
SPTLC1-204ENST00000469778 C2CD4CQ8TF44 421 aa9.12□□□□□ -0.95
SPTLC1-204ENST00000469778 SMIM12Q96EX1 92 aa9.12□□□□□ -0.95
SPTLC1-204ENST00000469778 C16orf74Q96GX8 76 aa9.12□□□□□ -0.95
SPTLC1-204ENST00000469778 IGHV4-28A0A0C4DH34 117 aa9.11□□□□□ -0.95
SPTLC1-204ENST00000469778 LOC102723971A0A1B0GUV8 181 aa9.11□□□□□ -0.95
SPTLC1-204ENST00000469778 LTAP01374 205 aa9.11□□□□□ -0.95
SPTLC1-204ENST00000469778 PRB4P10163 310 aaPredicted RBP9.11□□□□□ -0.95
SPTLC1-204ENST00000469778 TDRG1Q3Y452 100 aa9.11□□□□□ -0.95
SPTLC1-204ENST00000469778 ZNF506Q5JVG8 444 aa9.11□□□□□ -0.95
SPTLC1-204ENST00000469778 TMEM183AQ8IXX5 376 aa9.11□□□□□ -0.95
SPTLC1-204ENST00000469778 TMEM263Q8WUH6 116 aaKnown RBP9.11□□□□□ -0.95
SPTLC1-204ENST00000469778 TVP23CQ96ET8 276 aa9.11□□□□□ -0.95
SPTLC1-204ENST00000469778 KCNS1Q96KK3 526 aa9.11□□□□□ -0.95
SPTLC1-204ENST00000469778 LINC00479Q96M42 142 aa9.11□□□□□ -0.95
SPTLC1-204ENST00000469778 DNAH9Q9NYC9 4486 aa9.11□□□□□ -0.95
SPTLC1-204ENST00000469778 TRAV34A0A0B4J273 112 aa9.1□□□□□ -0.95
SPTLC1-204ENST00000469778 A0A0J9YWU9 116 aa9.1□□□□□ -0.95
SPTLC1-204ENST00000469778 FABP5P3A8MUU1 101 aa9.1□□□□□ -0.95
SPTLC1-204ENST00000469778 RGS13O14921 159 aa9.1□□□□□ -0.95
SPTLC1-204ENST00000469778 PFN1P07737 140 aaKnown RBP9.1□□□□□ -0.95
SPTLC1-204ENST00000469778 SPART-AS1P0CW21 52 aa9.1□□□□□ -0.95
SPTLC1-204ENST00000469778 BTN1A1Q13410 526 aa9.1□□□□□ -0.95
SPTLC1-204ENST00000469778 KIR3DS1Q14943 382 aa9.1□□□□□ -0.95
SPTLC1-204ENST00000469778 FAM159AQ6UWV7 190 aa9.1□□□□□ -0.95
SPTLC1-204ENST00000469778 Q86TA4 180 aa9.1□□□□□ -0.95
SPTLC1-204ENST00000469778 EIF4E3Q8N5X7 224 aaKnown RBP9.1□□□□□ -0.95
SPTLC1-204ENST00000469778 FAM210AQ96ND0 272 aa9.1□□□□□ -0.95
SPTLC1-204ENST00000469778 MED9Q9NWA0 146 aa9.1□□□□□ -0.95
SPTLC1-204ENST00000469778 TP53TG3Q9ULZ0 132 aa9.1□□□□□ -0.95
SPTLC1-204ENST00000469778 STAB2Q8WWQ8 2551 aa9.1□□□□□ -0.95
SPTLC1-204ENST00000469778 IGHV1OR15-1A0A075B7D0 117 aa9.09□□□□□ -0.95
SPTLC1-204ENST00000469778 SCO2A0A1W2PP80 73 aa9.09□□□□□ -0.95
SPTLC1-204ENST00000469778 J3KRW8 73 aa9.09□□□□□ -0.95
SPTLC1-204ENST00000469778 GCGP01275 180 aa9.09□□□□□ -0.95
SPTLC1-204ENST00000469778 RBMY1A1P0DJD3 496 aaKnown RBP9.09□□□□□ -0.95
SPTLC1-204ENST00000469778 RBMY1CP0DJD4 496 aa9.09□□□□□ -0.95
SPTLC1-204ENST00000469778 RPL35P42766 123 aaKnown RBP9.09□□□□□ -0.95
SPTLC1-204ENST00000469778 RBMY1FQ15415 496 aaKnown RBP9.09□□□□□ -0.95
SPTLC1-204ENST00000469778 IBA57Q5T440 356 aaKnown RBP9.09□□□□□ -0.95
SPTLC1-204ENST00000469778 BAGE2Q86Y30 109 aa9.09□□□□□ -0.95
SPTLC1-204ENST00000469778 SGK494Q96LW2 274 aa9.09□□□□□ -0.95
SPTLC1-204ENST00000469778 EIF5A2Q9GZV4 153 aaKnown RBP9.09□□□□□ -0.95
SPTLC1-204ENST00000469778 BIN3Q9NQY0 253 aa9.09□□□□□ -0.95
SPTLC1-204ENST00000469778 TIMM8BQ9Y5J9 83 aaPredicted RBP9.09□□□□□ -0.95
SPTLC1-204ENST00000469778 TRGV11A0A075B6L2 103 aa9.08□□□□□ -0.96
SPTLC1-204ENST00000469778 CXorf65A6NEN9 183 aa9.08□□□□□ -0.96
SPTLC1-204ENST00000469778 CBY3A6NI87 242 aa9.08□□□□□ -0.96
SPTLC1-204ENST00000469778 LYRM9A8MSI8 78 aa9.08□□□□□ -0.96
SPTLC1-204ENST00000469778 ZNF705GA8MUZ8 300 aaPredicted RBP9.08□□□□□ -0.96
SPTLC1-204ENST00000469778 PEA15Q15121 130 aa9.08□□□□□ -0.96
SPTLC1-204ENST00000469778 FAM162BQ5T6X4 162 aa9.08□□□□□ -0.96
SPTLC1-204ENST00000469778 C11orf45Q8TAV5 145 aa9.08□□□□□ -0.96
SPTLC1-204ENST00000469778 RNASE8Q8TDE3 154 aaKnown RBP9.08□□□□□ -0.96
SPTLC1-204ENST00000469778 MLST8Q9BVC4 326 aa9.08□□□□□ -0.96
SPTLC1-204ENST00000469778 TENM3Q9P273 2699 aa9.08□□□□□ -0.96
SPTLC1-204ENST00000469778 SNURFLB1AK76 121 aa9.07□□□□□ -0.96
SPTLC1-204ENST00000469778 HTN1P15515 57 aa9.07□□□□□ -0.96
SPTLC1-204ENST00000469778 DAZ2Q13117 558 aaKnown RBP9.07□□□□□ -0.96
SPTLC1-204ENST00000469778 CLLU1Q5K131 121 aa9.07□□□□□ -0.96
SPTLC1-204ENST00000469778 PRR9Q5T870 116 aa9.07□□□□□ -0.96
SPTLC1-204ENST00000469778 DKK2Q9UBU2 259 aa9.07□□□□□ -0.96
SPTLC1-204ENST00000469778 C9JCJ5 164 aa9.06□□□□□ -0.96
SPTLC1-204ENST00000469778 C3orf84H3BNL1 204 aa9.06□□□□□ -0.96
SPTLC1-204ENST00000469778 AZU1P20160 251 aa9.06□□□□□ -0.96
SPTLC1-204ENST00000469778 GNG4P50150 75 aa9.06□□□□□ -0.96
SPTLC1-204ENST00000469778 ZNF674Q2M3X9 581 aa9.06□□□□□ -0.96
SPTLC1-204ENST00000469778 LGALS9BQ3B8N2 356 aa9.06□□□□□ -0.96
SPTLC1-204ENST00000469778 FAM74A3Q4VXF1 159 aa9.06□□□□□ -0.96
SPTLC1-204ENST00000469778 C8orf49Q96NF6 230 aa9.06□□□□□ -0.96
SPTLC1-204ENST00000469778 SPXQ9BT56 116 aa9.06□□□□□ -0.96
SPTLC1-204ENST00000469778 SDF2L1Q9HCN8 221 aa9.06□□□□□ -0.96
SPTLC1-204ENST00000469778 ZNF80P51504 273 aaPredicted RBP9.05□□□□□ -0.96
SPTLC1-204ENST00000469778 TOR2AQ5JU69 321 aa9.05□□□□□ -0.96
SPTLC1-204ENST00000469778 MUC7Q8TAX7 377 aa9.05□□□□□ -0.96
SPTLC1-204ENST00000469778 ZC2HC1AQ96GY0 325 aa9.05□□□□□ -0.96
SPTLC1-204ENST00000469778 LY96Q9Y6Y9 160 aa9.05□□□□□ -0.96
SPTLC1-204ENST00000469778 HUWE1Q7Z6Z7 4374 aaKnown RBP9.05□□□□□ -0.96
SPTLC1-204ENST00000469778 PLAC8L1A1L4L8 177 aa9.04□□□□□ -0.96
SPTLC1-204ENST00000469778 DEFB4AO15263 64 aa9.04□□□□□ -0.96
SPTLC1-204ENST00000469778 EMP1P54849 157 aa9.04□□□□□ -0.96
SPTLC1-204ENST00000469778 TCL1AP56279 114 aa9.04□□□□□ -0.96
SPTLC1-204ENST00000469778 ZNF415Q09FC8 603 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 218.6 ms