RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 GATD1Q8NB37 220 aa7.06□□□□□ -1.28
SMC1A-205ENST00000469129 OR8A1Q8NGG7 326 aa7.06□□□□□ -1.28
SMC1A-205ENST00000469129 OR9G4Q8NGQ1 327 aa7.06□□□□□ -1.28
SMC1A-205ENST00000469129 DCANP1Q8TF63 244 aa7.06□□□□□ -1.28
SMC1A-205ENST00000469129 C20orf173Q96LM9 149 aa7.06□□□□□ -1.28
SMC1A-205ENST00000469129 MS4A6AQ9H2W1 248 aa7.06□□□□□ -1.28
SMC1A-205ENST00000469129 TSSC4Q9Y5U2 329 aaPredicted RBP7.06□□□□□ -1.28
SMC1A-205ENST00000469129 HIVEP2P31629 2446 aa7.06□□□□□ -1.28
SMC1A-205ENST00000469129 NSD1Q96L73 2696 aaPredicted RBP7.05□□□□□ -1.28
SMC1A-205ENST00000469129 FN1P02751 2386 aaKnown RBP7.05□□□□□ -1.28
SMC1A-205ENST00000469129 IGKV3-7A0A075B6H7 116 aa7.05□□□□□ -1.28
SMC1A-205ENST00000469129 INAFM1C9JVW0 142 aa7.05□□□□□ -1.28
SMC1A-205ENST00000469129 K7EQG2 157 aa7.05□□□□□ -1.28
SMC1A-205ENST00000469129 ORM1P02763 201 aa7.05□□□□□ -1.28
SMC1A-205ENST00000469129 GZMBP10144 247 aa7.05□□□□□ -1.28
SMC1A-205ENST00000469129 LEPP41159 167 aa7.05□□□□□ -1.28
SMC1A-205ENST00000469129 CAMPP49913 170 aa7.05□□□□□ -1.28
SMC1A-205ENST00000469129 Q0VG73 95 aa7.05□□□□□ -1.28
SMC1A-205ENST00000469129 DEFB136Q30KP8 78 aa7.05□□□□□ -1.28
SMC1A-205ENST00000469129 TCTEX1D4Q5JR98 221 aa7.05□□□□□ -1.28
SMC1A-205ENST00000469129 FER1L6-AS1Q8NA97 138 aa7.05□□□□□ -1.28
SMC1A-205ENST00000469129 LINC01006Q8NI28 216 aa7.05□□□□□ -1.28
SMC1A-205ENST00000469129 DYNLRB2Q8TF09 96 aa7.05□□□□□ -1.28
SMC1A-205ENST00000469129 TMEM18Q96B42 140 aa7.05□□□□□ -1.28
SMC1A-205ENST00000469129 ODF3Q96PU9 254 aa7.05□□□□□ -1.28
SMC1A-205ENST00000469129 NF1P21359 2839 aa7.04□□□□□ -1.28
SMC1A-205ENST00000469129 TMSB15BA0A087X1C1 80 aa7.04□□□□□ -1.28
SMC1A-205ENST00000469129 TRAV21A0A0B4J279 112 aa7.04□□□□□ -1.28
SMC1A-205ENST00000469129 F2Z2F3 143 aa7.04□□□□□ -1.28
SMC1A-205ENST00000469129 TCF21O43680 179 aa7.04□□□□□ -1.28
SMC1A-205ENST00000469129 DUSP14O95147 198 aaKnown RBP7.04□□□□□ -1.28
SMC1A-205ENST00000469129 IGLC6P0CF74 106 aa7.04□□□□□ -1.28
SMC1A-205ENST00000469129 PRB4P10163 310 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-205ENST00000469129 EDN2P20800 178 aa7.04□□□□□ -1.28
SMC1A-205ENST00000469129 SRIP30626 198 aa7.04□□□□□ -1.28
SMC1A-205ENST00000469129 ZNF80P51504 273 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-205ENST00000469129 SLAQ13239 276 aa7.04□□□□□ -1.28
SMC1A-205ENST00000469129 FHL3Q13643 280 aa7.04□□□□□ -1.28
SMC1A-205ENST00000469129 EBLN2Q6P2I7 272 aa7.04□□□□□ -1.28
SMC1A-205ENST00000469129 BAGE3Q86Y29 109 aa7.04□□□□□ -1.28
SMC1A-205ENST00000469129 LINC00518Q8N0U6 118 aa7.04□□□□□ -1.28
SMC1A-205ENST00000469129 TPPP3Q9BW30 176 aa7.04□□□□□ -1.28
SMC1A-205ENST00000469129 GRIFINA4D1Z8 144 aa7.03□□□□□ -1.28
SMC1A-205ENST00000469129 GPX1P07203 203 aa7.03□□□□□ -1.28
SMC1A-205ENST00000469129 ARMS2P0C7Q2 107 aa7.03□□□□□ -1.28
SMC1A-205ENST00000469129 FRMD6-AS1P0C7T7 363 aa7.03□□□□□ -1.28
SMC1A-205ENST00000469129 ESDP10768 282 aa7.03□□□□□ -1.28
SMC1A-205ENST00000469129 FABP4P15090 132 aa7.03□□□□□ -1.28
SMC1A-205ENST00000469129 PDZD11Q5EBL8 140 aa7.03□□□□□ -1.28
SMC1A-205ENST00000469129 PSMG4Q5JS54 123 aa7.03□□□□□ -1.28
SMC1A-205ENST00000469129 LYZL1Q6UWQ5 148 aa7.03□□□□□ -1.28
SMC1A-205ENST00000469129 C18orf65Q6ZTR6 163 aa7.03□□□□□ -1.28
SMC1A-205ENST00000469129 WFDC3Q8IUB2 231 aa7.03□□□□□ -1.28
SMC1A-205ENST00000469129 APRG1Q8IVJ8 170 aa7.03□□□□□ -1.28
SMC1A-205ENST00000469129 FAM19A4Q96LR4 140 aa7.03□□□□□ -1.28
SMC1A-205ENST00000469129 PACRGQ96M98 296 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-205ENST00000469129 RNF114Q9Y508 228 aa7.03□□□□□ -1.28
SMC1A-205ENST00000469129 MXRA5Q9NR99 2828 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 LOC102724200A0A096LPH7 203 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-205ENST00000469129 TRAV25A0A0B4J276 109 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 A0A1B0GUS0 222 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 OR4C46A6NHA9 309 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 ZNF688P0C7X2 276 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 CD28P10747 220 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 TSPOP30536 169 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 TFPI2P48307 235 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 CACNG7P62955 275 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 GFI1BQ5VTD9 330 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 DMRTA1Q5VZB9 504 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 FOXI2Q6ZQN5 318 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 ZNF493Q6ZR52 646 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 ZFAND2AQ8N6M9 145 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 KCNS1Q96KK3 526 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 C12orf57Q99622 126 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 HIST1H2BLQ99880 126 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 SSBP4Q9BWG4 385 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-205ENST00000469129 CNFNQ9BYD5 112 aa7.02□□□□□ -1.29
SMC1A-205ENST00000469129 SONP18583 2426 aaKnown RBP7.02□□□□□ -1.29
SMC1A-205ENST00000469129 A0A0J9YX75 114 aa7.01□□□□□ -1.29
SMC1A-205ENST00000469129 IFITM10A6NMD0 228 aa7.01□□□□□ -1.29
SMC1A-205ENST00000469129 CCL24O00175 119 aa7.01□□□□□ -1.29
SMC1A-205ENST00000469129 AMBPP02760 352 aa7.01□□□□□ -1.29
SMC1A-205ENST00000469129 CSN3P07498 182 aa7.01□□□□□ -1.29
SMC1A-205ENST00000469129 ZNF705DP0CH99 300 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-205ENST00000469129 ZNF705BP0CI00 300 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-205ENST00000469129 MED14OSP0DP75 135 aa7.01□□□□□ -1.29
SMC1A-205ENST00000469129 KIAA1644Q3SXP7 199 aa7.01□□□□□ -1.29
SMC1A-205ENST00000469129 GDF5OSQ5U4N7 250 aa7.01□□□□□ -1.29
SMC1A-205ENST00000469129 OR10D4PQ8NGN7 298 aa7.01□□□□□ -1.29
SMC1A-205ENST00000469129 C18orf32Q8TCD1 76 aa7.01□□□□□ -1.29
SMC1A-205ENST00000469129 DLX4Q92988 240 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-205ENST00000469129 RAX2Q96IS3 184 aa7.01□□□□□ -1.29
SMC1A-205ENST00000469129 SPAG8Q99932 426 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-205ENST00000469129 ALKBH7Q9BT30 221 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-205ENST00000469129 SIGLEC8Q9NYZ4 499 aa7.01□□□□□ -1.29
SMC1A-205ENST00000469129 NIPBLQ6KC79 2804 aaeCLIP7□□□□□ -1.29
SMC1A-205ENST00000469129 A0A1W2PRX2 142 aa7□□□□□ -1.29
SMC1A-205ENST00000469129 KLLNB2CW77 178 aa7□□□□□ -1.29
SMC1A-205ENST00000469129 F6UB75 175 aa7□□□□□ -1.29
SMC1A-205ENST00000469129 CRLF1O75462 422 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms