RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 TOMM20LQ6UXN7 152 aa0.32□□□□□ -2.36
SMC4-205ENST00000465563 TEX29Q8N6K0 151 aa0.32□□□□□ -2.36
SMC4-205ENST00000465563 C5orf17Q8NAS9 161 aa0.32□□□□□ -2.36
SMC4-205ENST00000465563 GRPEL2Q8TAA5 225 aa0.32□□□□□ -2.36
SMC4-205ENST00000465563 MPC1Q9Y5U8 109 aa0.32□□□□□ -2.36
SMC4-205ENST00000465563 FGD6Q6ZV73 1430 aa0.31□□□□□ -2.36
SMC4-205ENST00000465563 LOC107984640A0A0U1RRK4 108 aa0.31□□□□□ -2.36
SMC4-205ENST00000465563 C5orf58C9J3I9 102 aa0.31□□□□□ -2.36
SMC4-205ENST00000465563 H3BMG7 143 aa0.31□□□□□ -2.36
SMC4-205ENST00000465563 FAM107AO95990 144 aa0.31□□□□□ -2.36
SMC4-205ENST00000465563 RPS3P23396 243 aaKnown RBP eCLIP0.31□□□□□ -2.36
SMC4-205ENST00000465563 SPINT3P49223 89 aa0.31□□□□□ -2.36
SMC4-205ENST00000465563 CCSMST1Q4G0I0 132 aa0.31□□□□□ -2.36
SMC4-205ENST00000465563 Q6ZS92 163 aa0.31□□□□□ -2.36
SMC4-205ENST00000465563 Q86TA4 180 aa0.31□□□□□ -2.36
SMC4-205ENST00000465563 TMEM229BQ8NBD8 167 aa0.31□□□□□ -2.36
SMC4-205ENST00000465563 NAT14Q8WUY8 206 aa0.31□□□□□ -2.36
SMC4-205ENST00000465563 LXNQ9BS40 222 aa0.31□□□□□ -2.36
SMC4-205ENST00000465563 DDA1Q9BW61 102 aa0.31□□□□□ -2.36
SMC4-205ENST00000465563 CBLN4Q9NTU7 201 aa0.31□□□□□ -2.36
SMC4-205ENST00000465563 PLAC8Q9NZF1 115 aa0.31□□□□□ -2.36
SMC4-205ENST00000465563 NBDYA0A0U1RRE5 68 aa0.3□□□□□ -2.36
SMC4-205ENST00000465563 A0A1B0GV72 72 aa0.3□□□□□ -2.36
SMC4-205ENST00000465563 PFDN1O60925 122 aa0.3□□□□□ -2.36
SMC4-205ENST00000465563 SLC25A4P12235 298 aa0.3□□□□□ -2.36
SMC4-205ENST00000465563 CRYGSP22914 178 aa0.3□□□□□ -2.36
SMC4-205ENST00000465563 TCTEX1D1Q8N7M0 179 aa0.3□□□□□ -2.36
SMC4-205ENST00000465563 JPT1Q9UK76 154 aa0.3□□□□□ -2.36
SMC4-205ENST00000465563 TRAPPC2LQ9UL33 140 aa0.3□□□□□ -2.36
SMC4-205ENST00000465563 V9GYQ6 96 aa0.3□□□□□ -2.36
SMC4-205ENST00000465563 DSPPQ9NZW4 1301 aa0.3□□□□□ -2.36
SMC4-205ENST00000465563 A2MP01023 1474 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 MEGF8Q7Z7M0 2845 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 A0A1W2PPB8 328 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 A0A1W2PRS3 328 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 PRORSD1PA6NEY8 169 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 KIR3DP1A8MWS1 328 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 SULT1C4O75897 302 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 GYPBP06028 91 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 SRP9P49458 86 aaKnown RBP0.29□□□□□ -2.36
SMC4-205ENST00000465563 TMEM128Q5BJH2 165 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 C6orf52Q5T4I8 152 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 XAF1Q6GPH4 301 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 OR51A4Q8NGJ6 313 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 OR9Q1Q8NGQ5 310 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 CCDC115Q96NT0 180 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 C19orf12Q9NSK7 152 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 KIDINS220Q9ULH0 1771 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 FSIP2Q5CZC0 6907 aa0.29□□□□□ -2.36
SMC4-205ENST00000465563 BDP1A6H8Y1 2624 aa0.28□□□□□ -2.36
SMC4-205ENST00000465563 DLEC1Q9Y238 1755 aa0.28□□□□□ -2.36
SMC4-205ENST00000465563 LOC107986453A0A1B0GWG9 222 aa0.28□□□□□ -2.36
SMC4-205ENST00000465563 PGRMC1O00264 195 aaKnown RBP0.28□□□□□ -2.36
SMC4-205ENST00000465563 IFNA21P01568 189 aa0.28□□□□□ -2.36
SMC4-205ENST00000465563 RPL22P35268 128 aaKnown RBP0.28□□□□□ -2.36
SMC4-205ENST00000465563 CAV3P56539 151 aa0.28□□□□□ -2.36
SMC4-205ENST00000465563 SPINK7P58062 85 aa0.28□□□□□ -2.36
SMC4-205ENST00000465563 DNAJB13P59910 316 aa0.28□□□□□ -2.36
SMC4-205ENST00000465563 BLCAPP62952 87 aa0.28□□□□□ -2.36
SMC4-205ENST00000465563 QRFPP83859 136 aa0.28□□□□□ -2.36
SMC4-205ENST00000465563 GLYATL3Q5SZD4 288 aa0.28□□□□□ -2.36
SMC4-205ENST00000465563 MAP2P11137 1827 aaKnown RBP0.28□□□□□ -2.36
SMC4-205ENST00000465563 PLXNA2O75051 1894 aa0.28□□□□□ -2.36
SMC4-205ENST00000465563 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.27□□□□□ -2.37
SMC4-205ENST00000465563 ARL5CA6NH57 179 aa0.27□□□□□ -2.37
SMC4-205ENST00000465563 IGF2P01344 180 aa0.27□□□□□ -2.37
SMC4-205ENST00000465563 ASB16-AS1Q495Z4 193 aa0.27□□□□□ -2.37
SMC4-205ENST00000465563 LINC00208Q96KT6 92 aa0.27□□□□□ -2.37
SMC4-205ENST00000465563 MRPL35Q9NZE8 188 aaKnown RBP0.27□□□□□ -2.37
SMC4-205ENST00000465563 CACNA1HO95180 2353 aa0.26□□□□□ -2.37
SMC4-205ENST00000465563 LOC107984156A0A0G2JMH3 177 aa0.26□□□□□ -2.37
SMC4-205ENST00000465563 IFITM5A6NNB3 132 aa0.26□□□□□ -2.37
SMC4-205ENST00000465563 M0QZK8 103 aa0.26□□□□□ -2.37
SMC4-205ENST00000465563 LY6G6CO95867 125 aa0.26□□□□□ -2.37
SMC4-205ENST00000465563 HBDP02042 147 aa0.26□□□□□ -2.37
SMC4-205ENST00000465563 EVI2AP22794 236 aa0.26□□□□□ -2.37
SMC4-205ENST00000465563 FXYD3Q14802 87 aa0.26□□□□□ -2.37
SMC4-205ENST00000465563 Q5XG85 94 aa0.26□□□□□ -2.37
SMC4-205ENST00000465563 C3orf62Q6ZUJ4 267 aa0.26□□□□□ -2.37
SMC4-205ENST00000465563 ARL17AQ8IVW1 177 aa0.26□□□□□ -2.37
SMC4-205ENST00000465563 C5orf56Q8N8D9 126 aa0.26□□□□□ -2.37
SMC4-205ENST00000465563 OR5A2Q8NGI9 324 aa0.26□□□□□ -2.37
SMC4-205ENST00000465563 COMMD3Q9UBI1 195 aa0.26□□□□□ -2.37
SMC4-205ENST00000465563 TANC1Q9C0D5 1861 aa0.25□□□□□ -2.37
SMC4-205ENST00000465563 MED23Q9ULK4 1368 aa0.25□□□□□ -2.37
SMC4-205ENST00000465563 BBIP1A8MTZ0 92 aa0.25□□□□□ -2.37
SMC4-205ENST00000465563 FXYD6P3P58550 94 aa0.25□□□□□ -2.37
SMC4-205ENST00000465563 SNRPD3P62318 126 aaKnown RBP0.25□□□□□ -2.37
SMC4-205ENST00000465563 RPS28P62857 69 aaKnown RBP0.25□□□□□ -2.37
SMC4-205ENST00000465563 SAMD13Q5VXD3 122 aa0.25□□□□□ -2.37
SMC4-205ENST00000465563 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.25□□□□□ -2.37
SMC4-205ENST00000465563 BRK1Q8WUW1 75 aa0.25□□□□□ -2.37
SMC4-205ENST00000465563 AP1S3Q96PC3 154 aa0.25□□□□□ -2.37
SMC4-205ENST00000465563 NDUFAF1Q9Y375 327 aa0.25□□□□□ -2.37
SMC4-205ENST00000465563 ARAP1Q96P48 1450 aa0.24□□□□□ -2.37
SMC4-205ENST00000465563 PTPRGP23470 1445 aa0.24□□□□□ -2.37
SMC4-205ENST00000465563 LOC101927531A0A1B0GV80 90 aa0.24□□□□□ -2.37
SMC4-205ENST00000465563 EDF1O60869 148 aaKnown RBP0.24□□□□□ -2.37
SMC4-205ENST00000465563 SLC25A5P05141 298 aaKnown RBP0.24□□□□□ -2.37
SMC4-205ENST00000465563 NBEAP1P0C6P0 100 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms