RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 RASL10AQ92737 203 aa11.63□□□□□ -0.55
HMGN1-210ENST00000464078 LYRM2Q9NU23 88 aaPredicted RBP11.63□□□□□ -0.55
HMGN1-210ENST00000464078 IGLV5-52A0A0A0MRZ9 124 aa11.62□□□□□ -0.55
HMGN1-210ENST00000464078 LRCOL1A6NCL2 159 aa11.62□□□□□ -0.55
HMGN1-210ENST00000464078 FAM24AA6NFZ4 105 aa11.62□□□□□ -0.55
HMGN1-210ENST00000464078 E5RGE8 158 aa11.62□□□□□ -0.55
HMGN1-210ENST00000464078 GYPEP15421 78 aa11.62□□□□□ -0.55
HMGN1-210ENST00000464078 ZNF138P52744 262 aa11.62□□□□□ -0.55
HMGN1-210ENST00000464078 HBG1P69891 147 aa11.62□□□□□ -0.55
HMGN1-210ENST00000464078 HBG2P69892 147 aa11.62□□□□□ -0.55
HMGN1-210ENST00000464078 FAM122CQ6P4D5 195 aa11.62□□□□□ -0.55
HMGN1-210ENST00000464078 ZNF479Q96JC4 524 aa11.62□□□□□ -0.55
HMGN1-210ENST00000464078 TXNDC17Q9BRA2 123 aa11.62□□□□□ -0.55
HMGN1-210ENST00000464078 C9JCJ5 164 aa11.61□□□□□ -0.55
HMGN1-210ENST00000464078 SFTA3P0C7M3 94 aa11.61□□□□□ -0.55
HMGN1-210ENST00000464078 PVALBP20472 110 aaPredicted RBP11.61□□□□□ -0.55
HMGN1-210ENST00000464078 FGF7P21781 194 aa11.61□□□□□ -0.55
HMGN1-210ENST00000464078 TIRAPP58753 221 aa11.61□□□□□ -0.55
HMGN1-210ENST00000464078 ZNF266Q14584 549 aa11.61□□□□□ -0.55
HMGN1-210ENST00000464078 STX12Q86Y82 276 aa11.61□□□□□ -0.55
HMGN1-210ENST00000464078 FAM167A-AS1Q96KT0 104 aa11.61□□□□□ -0.55
HMGN1-210ENST00000464078 SPXQ9BT56 116 aa11.61□□□□□ -0.55
HMGN1-210ENST00000464078 SLC25A2Q9BXI2 301 aa11.61□□□□□ -0.55
HMGN1-210ENST00000464078 IGSF23A1L1A6 192 aa11.6□□□□□ -0.55
HMGN1-210ENST00000464078 HAMPP81172 84 aa11.6□□□□□ -0.55
HMGN1-210ENST00000464078 GCSAMLQ5JQS6 135 aa11.6□□□□□ -0.55
HMGN1-210ENST00000464078 TMEM252Q8N6L7 170 aa11.6□□□□□ -0.55
HMGN1-210ENST00000464078 Q8TAT8 98 aa11.6□□□□□ -0.55
HMGN1-210ENST00000464078 SDHCQ99643 169 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-210ENST00000464078 NPCDR1Q9BY65 106 aa11.6□□□□□ -0.55
HMGN1-210ENST00000464078 GPN1Q9HCN4 374 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-210ENST00000464078 RBAKDNA6NC62 111 aa11.59□□□□□ -0.55
HMGN1-210ENST00000464078 C1QBP02746 253 aa11.59□□□□□ -0.55
HMGN1-210ENST00000464078 NBEAP1P0C6P0 100 aa11.59□□□□□ -0.55
HMGN1-210ENST00000464078 ATP6V1FQ16864 119 aa11.59□□□□□ -0.55
HMGN1-210ENST00000464078 SH2D6Q7Z4S9 175 aa11.59□□□□□ -0.55
HMGN1-210ENST00000464078 C2orf50Q96LR7 162 aa11.59□□□□□ -0.55
HMGN1-210ENST00000464078 FAM25EA8MYX2 175 aa11.58□□□□□ -0.56
HMGN1-210ENST00000464078 J3QL48 77 aa11.58□□□□□ -0.56
HMGN1-210ENST00000464078 PSCAO43653 123 aa11.58□□□□□ -0.56
HMGN1-210ENST00000464078 LINC01556Q5JQF7 62 aa11.58□□□□□ -0.56
HMGN1-210ENST00000464078 MUC21Q5SSG8 566 aa11.58□□□□□ -0.56
HMGN1-210ENST00000464078 Q6AWC8 147 aa11.58□□□□□ -0.56
HMGN1-210ENST00000464078 TRGV11A0A075B6L2 103 aa11.57□□□□□ -0.56
HMGN1-210ENST00000464078 TRAV4A0A0B4J268 109 aa11.57□□□□□ -0.56
HMGN1-210ENST00000464078 IGHV3-38A0A0C4DH36 116 aa11.57□□□□□ -0.56
HMGN1-210ENST00000464078 C5orf51A6NDU8 294 aa11.57□□□□□ -0.56
HMGN1-210ENST00000464078 IL7P13232 177 aa11.57□□□□□ -0.56
HMGN1-210ENST00000464078 IL15RAQ13261 267 aa11.57□□□□□ -0.56
HMGN1-210ENST00000464078 TDRG1Q3Y452 100 aa11.57□□□□□ -0.56
HMGN1-210ENST00000464078 Q8N814 137 aa11.57□□□□□ -0.56
HMGN1-210ENST00000464078 FXYD5Q96DB9 178 aa11.57□□□□□ -0.56
HMGN1-210ENST00000464078 PHYHIPLQ96FC7 376 aa11.57□□□□□ -0.56
HMGN1-210ENST00000464078 RBM38Q9H0Z9 239 aaKnown RBP11.57□□□□□ -0.56
HMGN1-210ENST00000464078 BOLA1Q9Y3E2 137 aa11.57□□□□□ -0.56
HMGN1-210ENST00000464078 LENEPQ9Y5L5 61 aa11.57□□□□□ -0.56
HMGN1-210ENST00000464078 DNAH8Q96JB1 4490 aa11.56□□□□□ -0.56
HMGN1-210ENST00000464078 CCDC160A6NGH7 325 aa11.56□□□□□ -0.56
HMGN1-210ENST00000464078 IBA57-AS1B1ANH7 110 aa11.56□□□□□ -0.56
HMGN1-210ENST00000464078 S100A10P60903 97 aa11.56□□□□□ -0.56
HMGN1-210ENST00000464078 TMEM183BQ1AE95 376 aa11.56□□□□□ -0.56
HMGN1-210ENST00000464078 MIR17HGQ75NE6 70 aa11.56□□□□□ -0.56
HMGN1-210ENST00000464078 TMEM183AQ8IXX5 376 aa11.56□□□□□ -0.56
HMGN1-210ENST00000464078 OR51M1Q9H341 326 aa11.56□□□□□ -0.56
HMGN1-210ENST00000464078 FAM159AQ6UWV7 190 aa11.55□□□□□ -0.56
HMGN1-210ENST00000464078 SLC25A31Q9H0C2 315 aa11.55□□□□□ -0.56
HMGN1-210ENST00000464078 KRTAP29-1A8MX34 341 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-210ENST00000464078 OR10J4P0C629 311 aa11.54□□□□□ -0.56
HMGN1-210ENST00000464078 CSN1S1P47710 185 aa11.54□□□□□ -0.56
HMGN1-210ENST00000464078 RAB32Q13637 225 aa11.54□□□□□ -0.56
HMGN1-210ENST00000464078 Q6ZSA8 131 aa11.54□□□□□ -0.56
HMGN1-210ENST00000464078 OR4C5Q8NGB2 326 aa11.54□□□□□ -0.56
HMGN1-210ENST00000464078 TMED6Q8WW62 240 aa11.54□□□□□ -0.56
HMGN1-210ENST00000464078 PAXXQ9BUH6 204 aa11.54□□□□□ -0.56
HMGN1-210ENST00000464078 KCNIP2Q9NS61 270 aa11.54□□□□□ -0.56
HMGN1-210ENST00000464078 FAM30AQ9NZY2 134 aa11.54□□□□□ -0.56
HMGN1-210ENST00000464078 LOC100131303A0A0U1RQF7 123 aa11.53□□□□□ -0.56
HMGN1-210ENST00000464078 M0R2P5 195 aa11.53□□□□□ -0.56
HMGN1-210ENST00000464078 PLA2G10O15496 165 aa11.53□□□□□ -0.56
HMGN1-210ENST00000464078 PLA2G1BP04054 148 aaKnown RBP11.53□□□□□ -0.56
HMGN1-210ENST00000464078 GATA1P15976 413 aaPredicted RBP11.53□□□□□ -0.56
HMGN1-210ENST00000464078 SEC22CQ9BRL7 303 aa11.53□□□□□ -0.56
HMGN1-210ENST00000464078 LYRM1O43325 122 aa11.52□□□□□ -0.57
HMGN1-210ENST00000464078 TCRBP04435 133 aa11.52□□□□□ -0.57
HMGN1-210ENST00000464078 PPT1P50897 306 aa11.52□□□□□ -0.57
HMGN1-210ENST00000464078 LAGE3Q14657 143 aa11.52□□□□□ -0.57
HMGN1-210ENST00000464078 NHLRC2Q8NBF2 726 aa11.52□□□□□ -0.57
HMGN1-210ENST00000464078 THAP6Q8TBB0 222 aa11.52□□□□□ -0.57
HMGN1-210ENST00000464078 NUDT15Q9NV35 164 aa11.52□□□□□ -0.57
HMGN1-210ENST00000464078 TRAV6A0A075B6T7 132 aa11.51□□□□□ -0.57
HMGN1-210ENST00000464078 IGHV3-16A0A0C4DH30 117 aa11.51□□□□□ -0.57
HMGN1-210ENST00000464078 RANP62826 216 aaKnown RBP11.51□□□□□ -0.57
HMGN1-210ENST00000464078 OR5C1Q8NGR4 320 aa11.51□□□□□ -0.57
HMGN1-210ENST00000464078 TRAV8-6A0A0B4J262 113 aa11.5□□□□□ -0.57
HMGN1-210ENST00000464078 DIRC3C9JPN6 131 aa11.5□□□□□ -0.57
HMGN1-210ENST00000464078 OR7C2O60412 319 aa11.5□□□□□ -0.57
HMGN1-210ENST00000464078 PFN1P07737 140 aaKnown RBP11.5□□□□□ -0.57
HMGN1-210ENST00000464078 Q9HAA7 133 aa11.5□□□□□ -0.57
HMGN1-210ENST00000464078 UBE2L3P68036 154 aaKnown RBP11.49□□□□□ -0.57
HMGN1-210ENST00000464078 NHLH2Q02577 135 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms