RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ZNF492Q9P255 531 aa12.31□□□□□ -0.44
UPK3BP1-201ENST00000428678 FGF7P21781 194 aa12.3□□□□□ -0.44
UPK3BP1-201ENST00000428678 BAK1Q16611 211 aa12.3□□□□□ -0.44
UPK3BP1-201ENST00000428678 VWC2Q2TAL6 325 aa12.3□□□□□ -0.44
UPK3BP1-201ENST00000428678 IQCF2Q8IXL9 164 aa12.3□□□□□ -0.44
UPK3BP1-201ENST00000428678 OR10G4Q8NGN3 311 aa12.3□□□□□ -0.44
UPK3BP1-201ENST00000428678 Q8TAT8 98 aa12.3□□□□□ -0.44
UPK3BP1-201ENST00000428678 LRCOL1A6NCL2 159 aa12.29□□□□□ -0.44
UPK3BP1-201ENST00000428678 CENPXA8MT69 81 aa12.29□□□□□ -0.44
UPK3BP1-201ENST00000428678 C9JCJ5 164 aa12.29□□□□□ -0.44
UPK3BP1-201ENST00000428678 ZNF138P52744 262 aa12.29□□□□□ -0.44
UPK3BP1-201ENST00000428678 S100A11P31949 105 aa12.28□□□□□ -0.44
UPK3BP1-201ENST00000428678 BTCP35070 178 aa12.28□□□□□ -0.44
UPK3BP1-201ENST00000428678 GCSAMLQ5JQS6 135 aa12.28□□□□□ -0.44
UPK3BP1-201ENST00000428678 SLC25A2Q9BXI2 301 aa12.28□□□□□ -0.44
UPK3BP1-201ENST00000428678 C5orf51A6NDU8 294 aa12.27□□□□□ -0.45
UPK3BP1-201ENST00000428678 CCDC160A6NGH7 325 aa12.27□□□□□ -0.45
UPK3BP1-201ENST00000428678 PVALBP20472 110 aaPredicted RBP12.27□□□□□ -0.45
UPK3BP1-201ENST00000428678 SULT1A1P50225 295 aa12.27□□□□□ -0.45
UPK3BP1-201ENST00000428678 HBG1P69891 147 aa12.27□□□□□ -0.45
UPK3BP1-201ENST00000428678 HBG2P69892 147 aa12.27□□□□□ -0.45
UPK3BP1-201ENST00000428678 TMEM183BQ1AE95 376 aa12.27□□□□□ -0.45
UPK3BP1-201ENST00000428678 TMEM183AQ8IXX5 376 aa12.27□□□□□ -0.45
UPK3BP1-201ENST00000428678 Q8N814 137 aa12.27□□□□□ -0.45
UPK3BP1-201ENST00000428678 CHAC2Q8WUX2 184 aa12.27□□□□□ -0.45
UPK3BP1-201ENST00000428678 RASL10AQ92737 203 aa12.27□□□□□ -0.45
UPK3BP1-201ENST00000428678 SLC25A31Q9H0C2 315 aa12.27□□□□□ -0.45
UPK3BP1-201ENST00000428678 C11orf1Q9H5F2 150 aa12.27□□□□□ -0.45
UPK3BP1-201ENST00000428678 Q9HAA7 133 aa12.27□□□□□ -0.45
UPK3BP1-201ENST00000428678 FAM30AQ9NZY2 134 aa12.27□□□□□ -0.45
UPK3BP1-201ENST00000428678 IGHV3-38A0A0C4DH36 116 aa12.26□□□□□ -0.45
UPK3BP1-201ENST00000428678 LOC100131303A0A0U1RQF7 123 aa12.26□□□□□ -0.45
UPK3BP1-201ENST00000428678 IGSF23A1L1A6 192 aa12.26□□□□□ -0.45
UPK3BP1-201ENST00000428678 NBEAP1P0C6P0 100 aa12.26□□□□□ -0.45
UPK3BP1-201ENST00000428678 PPT1P50897 306 aa12.26□□□□□ -0.45
UPK3BP1-201ENST00000428678 S100A10P60903 97 aa12.26□□□□□ -0.45
UPK3BP1-201ENST00000428678 STX12Q86Y82 276 aa12.26□□□□□ -0.45
UPK3BP1-201ENST00000428678 NHLRC2Q8NBF2 726 aa12.26□□□□□ -0.45
UPK3BP1-201ENST00000428678 SPXQ9BT56 116 aa12.26□□□□□ -0.45
UPK3BP1-201ENST00000428678 TRBV7-9A0A0J9YWB2 115 aa12.25□□□□□ -0.45
UPK3BP1-201ENST00000428678 ZNF266Q14584 549 aa12.25□□□□□ -0.45
UPK3BP1-201ENST00000428678 MIR17HGQ75NE6 70 aa12.25□□□□□ -0.45
UPK3BP1-201ENST00000428678 FAM167A-AS1Q96KT0 104 aa12.25□□□□□ -0.45
UPK3BP1-201ENST00000428678 LYRM2Q9NU23 88 aaPredicted RBP12.25□□□□□ -0.45
UPK3BP1-201ENST00000428678 DNAH8Q96JB1 4490 aa12.24□□□□□ -0.45
UPK3BP1-201ENST00000428678 TRGV11A0A075B6L2 103 aa12.24□□□□□ -0.45
UPK3BP1-201ENST00000428678 TRAV4A0A0B4J268 109 aa12.24□□□□□ -0.45
UPK3BP1-201ENST00000428678 PLA2G1BP04054 148 aaKnown RBP12.24□□□□□ -0.45
UPK3BP1-201ENST00000428678 OR10J4P0C629 311 aa12.24□□□□□ -0.45
UPK3BP1-201ENST00000428678 LINC01556Q5JQF7 62 aa12.24□□□□□ -0.45
UPK3BP1-201ENST00000428678 FAM159AQ6UWV7 190 aa12.24□□□□□ -0.45
UPK3BP1-201ENST00000428678 SH2D6Q7Z4S9 175 aa12.24□□□□□ -0.45
UPK3BP1-201ENST00000428678 TMEM252Q8N6L7 170 aa12.24□□□□□ -0.45
UPK3BP1-201ENST00000428678 OR4C5Q8NGB2 326 aa12.24□□□□□ -0.45
UPK3BP1-201ENST00000428678 NPCDR1Q9BY65 106 aa12.24□□□□□ -0.45
UPK3BP1-201ENST00000428678 OR51M1Q9H341 326 aa12.24□□□□□ -0.45
UPK3BP1-201ENST00000428678 CSN1S1P47710 185 aa12.23□□□□□ -0.45
UPK3BP1-201ENST00000428678 ATP6V1FQ16864 119 aa12.23□□□□□ -0.45
UPK3BP1-201ENST00000428678 CNPY1Q3B7I2 92 aa12.23□□□□□ -0.45
UPK3BP1-201ENST00000428678 PHYHIPLQ96FC7 376 aa12.23□□□□□ -0.45
UPK3BP1-201ENST00000428678 C2orf50Q96LR7 162 aa12.23□□□□□ -0.45
UPK3BP1-201ENST00000428678 PAXXQ9BUH6 204 aa12.23□□□□□ -0.45
UPK3BP1-201ENST00000428678 NAGKQ9UJ70 344 aa12.23□□□□□ -0.45
UPK3BP1-201ENST00000428678 KRTAP29-1A8MX34 341 aaPredicted RBP12.22□□□□□ -0.45
UPK3BP1-201ENST00000428678 IBA57-AS1B1ANH7 110 aa12.22□□□□□ -0.45
UPK3BP1-201ENST00000428678 TIRAPP58753 221 aa12.22□□□□□ -0.45
UPK3BP1-201ENST00000428678 TRAV8-6A0A0B4J262 113 aa12.21□□□□□ -0.45
UPK3BP1-201ENST00000428678 IGHV3-16A0A0C4DH30 117 aa12.21□□□□□ -0.45
UPK3BP1-201ENST00000428678 C1QBP02746 253 aa12.21□□□□□ -0.45
UPK3BP1-201ENST00000428678 Q6AWC8 147 aa12.21□□□□□ -0.45
UPK3BP1-201ENST00000428678 LINC00528Q8N1L1 170 aa12.21□□□□□ -0.45
UPK3BP1-201ENST00000428678 THAP6Q8TBB0 222 aa12.21□□□□□ -0.45
UPK3BP1-201ENST00000428678 FXYD5Q96DB9 178 aa12.21□□□□□ -0.45
UPK3BP1-201ENST00000428678 SDHCQ99643 169 aaPredicted RBP12.21□□□□□ -0.45
UPK3BP1-201ENST00000428678 SEC22CQ9BRL7 303 aa12.21□□□□□ -0.45
UPK3BP1-201ENST00000428678 RBAKDNA6NC62 111 aa12.2□□□□□ -0.46
UPK3BP1-201ENST00000428678 M0R2P5 195 aa12.2□□□□□ -0.46
UPK3BP1-201ENST00000428678 RAB32Q13637 225 aa12.2□□□□□ -0.46
UPK3BP1-201ENST00000428678 OR10J3Q5JRS4 329 aa12.2□□□□□ -0.46
UPK3BP1-201ENST00000428678 TRAV6A0A075B6T7 132 aa12.19□□□□□ -0.46
UPK3BP1-201ENST00000428678 OR7C2O60412 319 aa12.19□□□□□ -0.46
UPK3BP1-201ENST00000428678 IGHV3-30P01768 117 aa12.19□□□□□ -0.46
UPK3BP1-201ENST00000428678 IGHV3-33P01772 117 aa12.19□□□□□ -0.46
UPK3BP1-201ENST00000428678 IGHV3-30-3P0DP02 117 aa12.19□□□□□ -0.46
UPK3BP1-201ENST00000428678 IGHV3-30-5P0DP03 117 aa12.19□□□□□ -0.46
UPK3BP1-201ENST00000428678 IL7P13232 177 aa12.19□□□□□ -0.46
UPK3BP1-201ENST00000428678 GATA1P15976 413 aaPredicted RBP12.19□□□□□ -0.46
UPK3BP1-201ENST00000428678 RANP62826 216 aaKnown RBP12.19□□□□□ -0.46
UPK3BP1-201ENST00000428678 DEFB104AQ8WTQ1 72 aa12.19□□□□□ -0.46
UPK3BP1-201ENST00000428678 LENEPQ9Y5L5 61 aa12.18□□□□□ -0.46
UPK3BP1-201ENST00000428678 GNRH2O43555 120 aa12.17□□□□□ -0.46
UPK3BP1-201ENST00000428678 PFN1P07737 140 aaKnown RBP12.17□□□□□ -0.46
UPK3BP1-201ENST00000428678 TDRG1Q3Y452 100 aa12.17□□□□□ -0.46
UPK3BP1-201ENST00000428678 BOLA1Q9Y3E2 137 aa12.17□□□□□ -0.46
UPK3BP1-201ENST00000428678 HMCN2Q8NDA2 5059 aa12.16□□□□□ -0.46
UPK3BP1-201ENST00000428678 TCRBP04435 133 aa12.16□□□□□ -0.46
UPK3BP1-201ENST00000428678 UBE2L3P68036 154 aaKnown RBP12.16□□□□□ -0.46
UPK3BP1-201ENST00000428678 NHLH2Q02577 135 aa12.16□□□□□ -0.46
UPK3BP1-201ENST00000428678 IL15RAQ13261 267 aa12.16□□□□□ -0.46
UPK3BP1-201ENST00000428678 WFDC2Q14508 124 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms