RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 CDC34P49427 236 aaPredicted RBP2.95□□□□□ -1.94
CLK1-203ENST00000409769 ACOT6Q3I5F7 207 aaPredicted RBP2.95□□□□□ -1.94
CLK1-203ENST00000409769 AKR1C8PQ5T2L2 129 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 SPATA31B1PQ5VZV4 182 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 TOMM20LQ6UXN7 152 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 MIR17HGQ75NE6 70 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 NDUFA11Q86Y39 141 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 ZNF709Q8N972 641 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 OR10G4Q8NGN3 311 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 OR10G9Q8NGN4 311 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 OR1L4Q8NGR5 311 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 Q8WTZ3 238 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 VSIG2Q96IQ7 327 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 FAM167A-AS1Q96KT0 104 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 OR5B12Q96R08 314 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 PFDN5Q99471 154 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 RNF2Q99496 336 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 KIR2DL4Q99706 377 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 CITED1Q99966 193 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 SHANK2-AS3Q9BTD1 123 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 C19orf24Q9BVV8 132 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 SLC25A2Q9BXI2 301 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 MRPL32Q9BYC8 188 aaKnown RBP2.95□□□□□ -1.94
CLK1-203ENST00000409769 SLC25A39Q9BZJ4 359 aaPredicted RBP2.95□□□□□ -1.94
CLK1-203ENST00000409769 TSSC4Q9Y5U2 329 aaPredicted RBP2.95□□□□□ -1.94
CLK1-203ENST00000409769 TMEM213A2RRL7 107 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 MAP1LC3B2A6NCE7 125 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 ZNF705EA8MWA4 302 aaPredicted RBP2.94□□□□□ -1.94
CLK1-203ENST00000409769 LINC01619G3V211 115 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 K7EMT4 169 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 HYPMO75409 117 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 EIF3GO75821 320 aaKnown RBP eCLIP2.94□□□□□ -1.94
CLK1-203ENST00000409769 IL4P05112 153 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 C8orf88P0DMB2 117 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 ORM2P19652 201 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 ZP3P21754 424 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 CRYBB3P26998 211 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 RHOBP62745 196 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 DEFB136Q30KP8 78 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 FAM78BQ5VT40 261 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 C10orf113Q5VZT2 155 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 IL34Q6ZMJ4 242 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 Q6ZVH6 145 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 LINC00305Q7Z4B0 112 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 OR11H1Q8NG94 326 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 OR1N2Q8NGR9 330 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 FAM213BQ8TBF2 198 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 SUN5Q8TC36 379 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 NDUFAF3Q9BU61 184 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 SCRT1Q9BWW7 348 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 ACTR3CQ9C0K3 210 aaPredicted RBP2.94□□□□□ -1.94
CLK1-203ENST00000409769 MAP1LC3BQ9GZQ8 125 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 SLC25A22Q9H936 323 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 MED9Q9NWA0 146 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 TMEM14CQ9P0S9 112 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 DOK5Q9P104 306 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 FUT9Q9Y231 359 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 HIGD1AQ9Y241 93 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 TRRAPQ9Y4A5 3859 aa2.94□□□□□ -1.94
CLK1-203ENST00000409769 IGLV8-61A0A075B6I0 122 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 IGHV3OR16-8A0A075B7F1 116 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 TRAV5A0A0B4J249 113 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 A0A1W2PPV4 95 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 LINC00862A6NCI5 91 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 ZNF98A6NK75 572 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 HMGB3O15347 200 aaKnown RBP2.93□□□□□ -1.94
CLK1-203ENST00000409769 COX7A2P2O60397 106 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 HBE1P02100 147 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 ARL14EPLP0DKL9 152 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 IGLC2P0DOY2 106 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 MYCNOSP40205 109 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 FGF8P55075 233 aaPredicted RBP2.93□□□□□ -1.94
CLK1-203ENST00000409769 TAS2R45P59539 299 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 CCL20P78556 96 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 RPEL1Q2QD12 228 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 KHDC3LQ587J8 217 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 C1orf194Q5T5A4 169 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 LCN15Q6UWW0 184 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 SFT2D1Q8WV19 159 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 FXYD5Q96DB9 178 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 LINC00167Q96N53 147 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 METTL26Q96S19 204 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 C20orf24Q9BUV8 137 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 PBDC1Q9BVG4 233 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 DAZ1Q9NQZ3 744 aaKnown RBP2.93□□□□□ -1.94
CLK1-203ENST00000409769 RABAC1Q9UI14 185 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 NIPBLQ6KC79 2804 aaeCLIP2.93□□□□□ -1.94
CLK1-203ENST00000409769 CMYA5Q8N3K9 4069 aa2.93□□□□□ -1.94
CLK1-203ENST00000409769 IGHV7-4-1A0A0J9YVY3 117 aa2.92□□□□□ -1.94
CLK1-203ENST00000409769 C2orf70A6NJV1 201 aa2.92□□□□□ -1.94
CLK1-203ENST00000409769 H3BQ15 152 aa2.92□□□□□ -1.94
CLK1-203ENST00000409769 ZNF207O43670 478 aaKnown RBP2.92□□□□□ -1.94
CLK1-203ENST00000409769 NDUFS6O75380 124 aaKnown RBP2.92□□□□□ -1.94
CLK1-203ENST00000409769 SERF1AO75920 110 aa2.92□□□□□ -1.94
CLK1-203ENST00000409769 CXorf1O96002 111 aa2.92□□□□□ -1.94
CLK1-203ENST00000409769 CD5P06127 495 aa2.92□□□□□ -1.94
CLK1-203ENST00000409769 OR10J4P0C629 311 aa2.92□□□□□ -1.94
CLK1-203ENST00000409769 PYYP10082 97 aa2.92□□□□□ -1.94
CLK1-203ENST00000409769 RPL7P18124 248 aaKnown RBP2.92□□□□□ -1.94
CLK1-203ENST00000409769 NPPCP23582 126 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms