RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TRAV4A0A0B4J268 109 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 PIGBOS1A0A0B4J2F0 54 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 C7orf66A4D0T2 115 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 C9JCJ5 164 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 TSC22D2O75157 780 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 CAMLGP49069 296 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 TMEM183BQ1AE95 376 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 GCSAMLQ5JQS6 135 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 FAM122CQ6P4D5 195 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 TMEM183AQ8IXX5 376 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 MCFD2Q8NI22 146 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 BAALCQ8WXS3 180 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 GGACTQ9BVM4 153 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 SLC25A31Q9H0C2 315 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 TMEM14CQ9P0S9 112 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 RSL24D1Q9UHA3 163 aaKnown RBP7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 FLVCR2Q9UPI3 526 aa7.76□□□□□ -1.17
SPTLC1P3-201ENST00000403408 SCGB1D2O95969 90 aa7.75□□□□□ -1.17
SPTLC1P3-201ENST00000403408 IGLV2-8P01709 118 aa7.75□□□□□ -1.17
SPTLC1P3-201ENST00000403408 MBPP02686 304 aaPredicted RBP7.75□□□□□ -1.17
SPTLC1P3-201ENST00000403408 HIST1H1EP10412 219 aaKnown RBP7.75□□□□□ -1.17
SPTLC1P3-201ENST00000403408 PPT1P50897 306 aa7.75□□□□□ -1.17
SPTLC1P3-201ENST00000403408 NHLRC2Q8NBF2 726 aa7.75□□□□□ -1.17
SPTLC1P3-201ENST00000403408 FAM167A-AS1Q96KT0 104 aa7.75□□□□□ -1.17
SPTLC1P3-201ENST00000403408 SLC25A21Q9BQT8 299 aaPredicted RBP7.75□□□□□ -1.17
SPTLC1P3-201ENST00000403408 SLIRPQ9GZT3 109 aaKnown RBP7.75□□□□□ -1.17
SPTLC1P3-201ENST00000403408 SRRQ9GZT4 340 aa7.75□□□□□ -1.17
SPTLC1P3-201ENST00000403408 C11orf1Q9H5F2 150 aa7.75□□□□□ -1.17
SPTLC1P3-201ENST00000403408 RABL2AQ9UBK7 228 aaPredicted RBP7.75□□□□□ -1.17
SPTLC1P3-201ENST00000403408 PRELID1Q9Y255 219 aa7.75□□□□□ -1.17
SPTLC1P3-201ENST00000403408 FABP12A6NFH5 140 aa7.74□□□□□ -1.17
SPTLC1P3-201ENST00000403408 GNRH2O43555 120 aa7.74□□□□□ -1.17
SPTLC1P3-201ENST00000403408 TAS2R30P59541 319 aa7.74□□□□□ -1.17
SPTLC1P3-201ENST00000403408 UBE2MP61081 183 aaKnown RBP7.74□□□□□ -1.17
SPTLC1P3-201ENST00000403408 ZNF266Q14584 549 aa7.74□□□□□ -1.17
SPTLC1P3-201ENST00000403408 OR10J3Q5JRS4 329 aa7.74□□□□□ -1.17
SPTLC1P3-201ENST00000403408 DPPA3Q6W0C5 159 aa7.74□□□□□ -1.17
SPTLC1P3-201ENST00000403408 OR4C5Q8NGB2 326 aa7.74□□□□□ -1.17
SPTLC1P3-201ENST00000403408 SLC25A2Q9BXI2 301 aa7.74□□□□□ -1.17
SPTLC1P3-201ENST00000403408 SLC39A9Q9NUM3 307 aa7.74□□□□□ -1.17
SPTLC1P3-201ENST00000403408 WDR83OSQ9Y284 106 aa7.74□□□□□ -1.17
SPTLC1P3-201ENST00000403408 LPAP08519 4548 aa7.74□□□□□ -1.17
SPTLC1P3-201ENST00000403408 ZNF138P52744 262 aa7.73□□□□□ -1.17
SPTLC1P3-201ENST00000403408 PDE6HQ13956 83 aa7.73□□□□□ -1.17
SPTLC1P3-201ENST00000403408 LAGE3Q14657 143 aa7.73□□□□□ -1.17
SPTLC1P3-201ENST00000403408 TMEM78Q5T7P6 136 aa7.73□□□□□ -1.17
SPTLC1P3-201ENST00000403408 LELP1Q5T871 98 aa7.73□□□□□ -1.17
SPTLC1P3-201ENST00000403408 Q6AWC8 147 aa7.73□□□□□ -1.17
SPTLC1P3-201ENST00000403408 DAZ4Q86SG3 579 aaKnown RBP7.73□□□□□ -1.17
SPTLC1P3-201ENST00000403408 TOMM5Q8N4H5 51 aa7.73□□□□□ -1.17
SPTLC1P3-201ENST00000403408 SLC25A29Q8N8R3 303 aa7.73□□□□□ -1.17
SPTLC1P3-201ENST00000403408 OR1L4Q8NGR5 311 aa7.73□□□□□ -1.17
SPTLC1P3-201ENST00000403408 SPXQ9BT56 116 aa7.73□□□□□ -1.17
SPTLC1P3-201ENST00000403408 DAZ3Q9NR90 486 aaKnown RBP7.73□□□□□ -1.17
SPTLC1P3-201ENST00000403408 TIMM9Q9Y5J7 89 aa7.73□□□□□ -1.17
SPTLC1P3-201ENST00000403408 V9GYH0 126 aa7.73□□□□□ -1.17
SPTLC1P3-201ENST00000403408 TRAV8-6A0A0B4J262 113 aa7.72□□□□□ -1.17
SPTLC1P3-201ENST00000403408 RNF222A6NCQ9 220 aa7.72□□□□□ -1.17
SPTLC1P3-201ENST00000403408 CST7O76096 145 aa7.72□□□□□ -1.17
SPTLC1P3-201ENST00000403408 RPL29P47914 159 aaKnown RBP7.72□□□□□ -1.17
SPTLC1P3-201ENST00000403408 ODF1Q14990 250 aa7.72□□□□□ -1.17
SPTLC1P3-201ENST00000403408 IAH1Q2TAA2 248 aaPredicted RBP7.72□□□□□ -1.17
SPTLC1P3-201ENST00000403408 VWC2Q2TAL6 325 aa7.72□□□□□ -1.17
SPTLC1P3-201ENST00000403408 Q6ZRG5 221 aa7.72□□□□□ -1.17
SPTLC1P3-201ENST00000403408 PHYHIPLQ96FC7 376 aa7.72□□□□□ -1.17
SPTLC1P3-201ENST00000403408 TM2D2Q9BX73 214 aa7.72□□□□□ -1.17
SPTLC1P3-201ENST00000403408 Q9UF83 564 aa7.72□□□□□ -1.17
SPTLC1P3-201ENST00000403408 RBFOX3A6NFN3 312 aa7.71□□□□□ -1.18
SPTLC1P3-201ENST00000403408 FAM24AA6NFZ4 105 aa7.71□□□□□ -1.18
SPTLC1P3-201ENST00000403408 M0R2P5 195 aa7.71□□□□□ -1.18
SPTLC1P3-201ENST00000403408 FAUP35544 74 aaKnown RBP7.71□□□□□ -1.18
SPTLC1P3-201ENST00000403408 RPL37AP61513 92 aaKnown RBP7.71□□□□□ -1.18
SPTLC1P3-201ENST00000403408 MIR17HGQ75NE6 70 aa7.71□□□□□ -1.18
SPTLC1P3-201ENST00000403408 SH2D6Q7Z4S9 175 aa7.71□□□□□ -1.18
SPTLC1P3-201ENST00000403408 FXYD5Q96DB9 178 aa7.71□□□□□ -1.18
SPTLC1P3-201ENST00000403408 PFDN5Q99471 154 aa7.71□□□□□ -1.18
SPTLC1P3-201ENST00000403408 GSKIPQ9P0R6 139 aa7.71□□□□□ -1.18
SPTLC1P3-201ENST00000403408 IGHV3-73A0A0B4J1V6 119 aa7.7□□□□□ -1.18
SPTLC1P3-201ENST00000403408 TRBV7-9A0A0J9YWB2 115 aa7.7□□□□□ -1.18
SPTLC1P3-201ENST00000403408 CAV2P51636 162 aa7.7□□□□□ -1.18
SPTLC1P3-201ENST00000403408 BAK1Q16611 211 aa7.7□□□□□ -1.18
SPTLC1P3-201ENST00000403408 TDRG1Q3Y452 100 aa7.7□□□□□ -1.18
SPTLC1P3-201ENST00000403408 PYDC2Q56P42 97 aa7.7□□□□□ -1.18
SPTLC1P3-201ENST00000403408 TRGV11A0A075B6L2 103 aa7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 UBE2L5PA0A1B0GUS4 154 aa7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 CCSO14618 274 aa7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 RS1O15537 224 aa7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 NDUFB6O95139 128 aa7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 TYMSP04818 313 aa7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 PFN1P07737 140 aaKnown RBP7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 NBEAP1P0C6P0 100 aa7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 LINC00694P0DN24 101 aa7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 ASIPP42127 132 aa7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 CFAP126Q5VTH2 177 aa7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 CHAC2Q8WUX2 184 aa7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 TVP23CQ96ET8 276 aa7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 GTSF1LQ9H1H1 148 aa7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 UQCC1Q9NVA1 299 aa7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 NAGKQ9UJ70 344 aa7.69□□□□□ -1.18
SPTLC1P3-201ENST00000403408 IGSF23A1L1A6 192 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms