RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 NOP10Q9NPE3 64 aaKnown RBP11.26□□□□□ -0.61
GABPA-202ENST00000400075 A0A0U1RRA0 63 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 RBMY1BA6NDE4 496 aaKnown RBP11.26□□□□□ -0.61
GABPA-202ENST00000400075 RBMY1EA6NEQ0 496 aaKnown RBP11.26□□□□□ -0.61
GABPA-202ENST00000400075 RBMY1DP0C7P1 496 aaKnown RBP11.26□□□□□ -0.61
GABPA-202ENST00000400075 RBMY1A1P0DJD3 496 aaKnown RBP11.26□□□□□ -0.61
GABPA-202ENST00000400075 RBMY1CP0DJD4 496 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 PARD6GQ9BYG4 376 aaPredicted RBP11.26□□□□□ -0.61
GABPA-202ENST00000400075 F6UB75 175 aa11.25□□□□□ -0.61
GABPA-202ENST00000400075 SLC25A20O43772 301 aa11.25□□□□□ -0.61
GABPA-202ENST00000400075 CD300EQ496F6 205 aaPredicted RBP11.25□□□□□ -0.61
GABPA-202ENST00000400075 ZNRF2Q8NHG8 242 aa11.25□□□□□ -0.61
GABPA-202ENST00000400075 ZNF493Q6ZR52 646 aa11.25□□□□□ -0.61
GABPA-202ENST00000400075 LINC00479Q96M42 142 aa11.25□□□□□ -0.61
GABPA-202ENST00000400075 IGLV11-55A0A075B6I3 123 aa11.25□□□□□ -0.61
GABPA-202ENST00000400075 KRTAP10-9P60411 292 aa11.25□□□□□ -0.61
GABPA-202ENST00000400075 SLC25A34Q6PIV7 304 aa11.25□□□□□ -0.61
GABPA-202ENST00000400075 TRPT1Q86TN4 253 aaKnown RBP11.25□□□□□ -0.61
GABPA-202ENST00000400075 DERL1Q9BUN8 251 aa11.25□□□□□ -0.61
GABPA-202ENST00000400075 ANXA2RQ3ZCQ2 193 aa11.25□□□□□ -0.61
GABPA-202ENST00000400075 ATP5G1P05496 136 aa11.24□□□□□ -0.61
GABPA-202ENST00000400075 MEGF9Q9H1U4 602 aa11.24□□□□□ -0.61
GABPA-202ENST00000400075 DEFB135Q30KP9 77 aa11.24□□□□□ -0.61
GABPA-202ENST00000400075 THAP8Q8NA92 274 aa11.24□□□□□ -0.61
GABPA-202ENST00000400075 TMEM14CQ9P0S9 112 aa11.24□□□□□ -0.61
GABPA-202ENST00000400075 CDSNQ15517 529 aa11.24□□□□□ -0.61
GABPA-202ENST00000400075 PTPRSQ13332 1948 aa11.24□□□□□ -0.61
GABPA-202ENST00000400075 F8P00451 2351 aa11.24□□□□□ -0.61
GABPA-202ENST00000400075 GPHB5Q86YW7 130 aa11.24□□□□□ -0.61
GABPA-202ENST00000400075 GHRHP01286 108 aa11.23□□□□□ -0.61
GABPA-202ENST00000400075 LAGE3Q14657 143 aa11.23□□□□□ -0.61
GABPA-202ENST00000400075 RITA1Q96K30 269 aa11.23□□□□□ -0.61
GABPA-202ENST00000400075 PRR25Q96S07 402 aa11.23□□□□□ -0.61
GABPA-202ENST00000400075 GSN-AS1Q9NRJ2 163 aa11.23□□□□□ -0.61
GABPA-202ENST00000400075 LY6G5BQ8NDX9 201 aa11.23□□□□□ -0.61
GABPA-202ENST00000400075 A0A087X0M5 115 aa11.23□□□□□ -0.61
GABPA-202ENST00000400075 A0A1B0GX30 115 aa11.23□□□□□ -0.61
GABPA-202ENST00000400075 TMEM75Q8N9X5 138 aa11.23□□□□□ -0.61
GABPA-202ENST00000400075 GOLGB1Q14789 3259 aaKnown RBP11.23□□□□□ -0.61
GABPA-202ENST00000400075 D6R8Y8 96 aa11.23□□□□□ -0.61
GABPA-202ENST00000400075 ZNF25P17030 456 aaPredicted RBP11.23□□□□□ -0.61
GABPA-202ENST00000400075 JPT2Q9H910 190 aa11.23□□□□□ -0.61
GABPA-202ENST00000400075 FSTL3O95633 263 aa11.22□□□□□ -0.61
GABPA-202ENST00000400075 LINC00614P0C842 121 aa11.22□□□□□ -0.61
GABPA-202ENST00000400075 S100A7L2Q5SY68 101 aa11.22□□□□□ -0.61
GABPA-202ENST00000400075 Q6ZSV7 163 aa11.22□□□□□ -0.61
GABPA-202ENST00000400075 ATOH7Q8N100 152 aa11.22□□□□□ -0.61
GABPA-202ENST00000400075 A0A087WWC5 75 aa11.22□□□□□ -0.61
GABPA-202ENST00000400075 LINC00587B1AMM8 73 aa11.22□□□□□ -0.61
GABPA-202ENST00000400075 K7EIM0 57 aa11.22□□□□□ -0.61
GABPA-202ENST00000400075 SRSF2Q01130 221 aaKnown RBP11.22□□□□□ -0.61
GABPA-202ENST00000400075 MRPL16Q9NX20 251 aaKnown RBP11.22□□□□□ -0.61
GABPA-202ENST00000400075 K7EMT4 169 aa11.22□□□□□ -0.61
GABPA-202ENST00000400075 CTSGP08311 255 aa11.22□□□□□ -0.61
GABPA-202ENST00000400075 FAM19A2Q8N3H0 131 aa11.22□□□□□ -0.61
GABPA-202ENST00000400075 RHOHQ15669 191 aa11.21□□□□□ -0.61
GABPA-202ENST00000400075 LINC01551Q86U37 167 aa11.21□□□□□ -0.61
GABPA-202ENST00000400075 CYTL1Q9NRR1 136 aa11.21□□□□□ -0.61
GABPA-202ENST00000400075 DLX4Q92988 240 aaPredicted RBP11.21□□□□□ -0.61
GABPA-202ENST00000400075 SPATA45Q537H7 98 aa11.21□□□□□ -0.61
GABPA-202ENST00000400075 TMEM243Q9BU79 118 aa11.21□□□□□ -0.61
GABPA-202ENST00000400075 PCNX3Q9H6A9 2034 aa11.21□□□□□ -0.62
GABPA-202ENST00000400075 KIAA1549LQ6ZVL6 1849 aa11.21□□□□□ -0.62
GABPA-202ENST00000400075 RASL10AQ92737 203 aa11.21□□□□□ -0.62
GABPA-202ENST00000400075 TMEM61Q8N0U2 210 aa11.2□□□□□ -0.62
GABPA-202ENST00000400075 ANGP03950 147 aaKnown RBP11.2□□□□□ -0.62
GABPA-202ENST00000400075 HILS1P60008 231 aa11.2□□□□□ -0.62
GABPA-202ENST00000400075 C8orf49Q96NF6 230 aa11.2□□□□□ -0.62
GABPA-202ENST00000400075 CARHSP1Q9Y2V2 147 aaKnown RBP11.2□□□□□ -0.62
GABPA-202ENST00000400075 LY96Q9Y6Y9 160 aa11.2□□□□□ -0.62
GABPA-202ENST00000400075 U3KQE9 123 aa11.2□□□□□ -0.62
GABPA-202ENST00000400075 RPL24P83731 157 aaKnown RBP11.19□□□□□ -0.62
GABPA-202ENST00000400075 CHTOPQ9Y3Y2 248 aaKnown RBP11.19□□□□□ -0.62
GABPA-202ENST00000400075 A0A1B0GW64 132 aa11.19□□□□□ -0.62
GABPA-202ENST00000400075 M0R2P5 195 aa11.19□□□□□ -0.62
GABPA-202ENST00000400075 IGHG4P01861 327 aa11.19□□□□□ -0.62
GABPA-202ENST00000400075 GAGE6Q13070 117 aa11.19□□□□□ -0.62
GABPA-202ENST00000400075 MRPL23Q16540 153 aaKnown RBP11.19□□□□□ -0.62
GABPA-202ENST00000400075 MBD6Q96DN6 1003 aa11.19□□□□□ -0.62
GABPA-202ENST00000400075 MRPL53Q96EL3 112 aaKnown RBP11.19□□□□□ -0.62
GABPA-202ENST00000400075 SMR3AQ99954 134 aa11.19□□□□□ -0.62
GABPA-202ENST00000400075 Q9HAA7 133 aa11.19□□□□□ -0.62
GABPA-202ENST00000400075 IGHV3-64A0A075B6Q5 118 aa11.19□□□□□ -0.62
GABPA-202ENST00000400075 IGKV1-17P01599 117 aa11.19□□□□□ -0.62
GABPA-202ENST00000400075 PLNP26678 52 aa11.19□□□□□ -0.62
GABPA-202ENST00000400075 CST9LQ9H4G1 147 aa11.19□□□□□ -0.62
GABPA-202ENST00000400075 HECTD1Q9ULT8 2610 aa11.19□□□□□ -0.62
GABPA-202ENST00000400075 I3L2K1 104 aa11.19□□□□□ -0.62
GABPA-202ENST00000400075 RASL11AQ6T310 242 aa11.19□□□□□ -0.62
GABPA-202ENST00000400075 IFI27L1Q96BM0 104 aa11.19□□□□□ -0.62
GABPA-202ENST00000400075 GNB1LQ9BYB4 327 aa11.18□□□□□ -0.62
GABPA-202ENST00000400075 IGKV2D-24A0A075B6R9 120 aa11.18□□□□□ -0.62
GABPA-202ENST00000400075 DPM2O94777 84 aa11.18□□□□□ -0.62
GABPA-202ENST00000400075 SMIM12Q96EX1 92 aa11.18□□□□□ -0.62
GABPA-202ENST00000400075 SMIM13P0DJ93 91 aa11.18□□□□□ -0.62
GABPA-202ENST00000400075 AMN1Q8IY45 258 aa11.18□□□□□ -0.62
GABPA-202ENST00000400075 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.18□□□□□ -0.62
GABPA-202ENST00000400075 SLC25A2Q9BXI2 301 aa11.18□□□□□ -0.62
GABPA-202ENST00000400075 ODF3BA8MYP8 253 aa11.17□□□□□ -0.62
GABPA-202ENST00000400075 HLA-DMBP28068 263 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms