RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 SLC25A34Q6PIV7 304 aa8.1□□□□□ -1.11
CPSF1P1-201ENST00000397477 CRYBG3Q68DQ2 2970 aa8.1□□□□□ -1.11
CPSF1P1-201ENST00000397477 A0A087X0K7 114 aa8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 F8W735 103 aaPredicted RBP8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 H3BVH4 76 aa8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 MPV17L2Q567V2 206 aa8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 Q6ZQT7 251 aa8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 GFRA4Q9GZZ7 299 aa8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 SMAD5-AS1Q9Y6J3 95 aa8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 TGFAP01135 160 aa8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 MRPL51Q4U2R6 128 aaKnown RBP8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 SMIM12Q96EX1 92 aa8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 MOB4Q9Y3A3 225 aa8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 PDE6HQ13956 83 aa8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 ZNF502Q8TBZ5 544 aa8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 CHCHD1Q96BP2 118 aaKnown RBP8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 URB1-AS1Q96HZ7 61 aa8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 ANKRD17O75179 2603 aaKnown RBP8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 CELSR1Q9NYQ6 3014 aa8.09□□□□□ -1.11
CPSF1P1-201ENST00000397477 NPYP01303 97 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 FOXE3Q13461 319 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 KLF5Q13887 457 aaPredicted RBP8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 Q5PR19 223 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 Q8N976 141 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 AP1S3Q96PC3 154 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 AGPAT4-IT1Q9H0P7 198 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 SIGLEC8Q9NYZ4 499 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 ACANP16112 2415 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 UTP20O75691 2785 aaKnown RBP8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 C2orf70A6NJV1 201 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 RNASE4P34096 147 aaKnown RBP8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 C8orf86Q6ZUL3 223 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 CCDC140Q96MF4 163 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 NAA38Q9BRA0 125 aaKnown RBP8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 IGHV1-69DA0A0B4J2H0 117 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 BUB3O43684 328 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 IGHV1-69P01742 117 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 FCER1GP30273 86 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 C1orf122Q6ZSJ8 110 aa8.08□□□□□ -1.12
CPSF1P1-201ENST00000397477 C7orf71A4D174 169 aa8.07□□□□□ -1.12
CPSF1P1-201ENST00000397477 F5H697 171 aa8.07□□□□□ -1.12
CPSF1P1-201ENST00000397477 OVOL3O00110 214 aa8.07□□□□□ -1.12
CPSF1P1-201ENST00000397477 FAM104BQ5XKR9 115 aa8.07□□□□□ -1.12
CPSF1P1-201ENST00000397477 UNQ9165/PRO28630Q6UXU0 137 aa8.07□□□□□ -1.12
CPSF1P1-201ENST00000397477 MAP1LC3AQ9H492 121 aa8.07□□□□□ -1.12
CPSF1P1-201ENST00000397477 LEPP41159 167 aa8.07□□□□□ -1.12
CPSF1P1-201ENST00000397477 OR10J6PQ8NGY7 276 aa8.07□□□□□ -1.12
CPSF1P1-201ENST00000397477 GAS8-AS1O95177 125 aa8.07□□□□□ -1.12
CPSF1P1-201ENST00000397477 OR4X2Q8NGF9 303 aa8.07□□□□□ -1.12
CPSF1P1-201ENST00000397477 IGF1P05019 195 aa8.06□□□□□ -1.12
CPSF1P1-201ENST00000397477 Q6AWC8 147 aa8.06□□□□□ -1.12
CPSF1P1-201ENST00000397477 Q6ZS46 218 aa8.06□□□□□ -1.12
CPSF1P1-201ENST00000397477 RAB37Q96AX2 223 aa8.06□□□□□ -1.12
CPSF1P1-201ENST00000397477 FAM231BA6NCW3 169 aa8.06□□□□□ -1.12
CPSF1P1-201ENST00000397477 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.06□□□□□ -1.12
CPSF1P1-201ENST00000397477 C5orf56Q8N8D9 126 aa8.06□□□□□ -1.12
CPSF1P1-201ENST00000397477 RPS20P60866 119 aaKnown RBP8.06□□□□□ -1.12
CPSF1P1-201ENST00000397477 PHLDA3Q9Y5J5 127 aa8.06□□□□□ -1.12
CPSF1P1-201ENST00000397477 ITPR1Q14643 2758 aa8.06□□□□□ -1.12
CPSF1P1-201ENST00000397477 MRPS12O15235 138 aaKnown RBP8.05□□□□□ -1.12
CPSF1P1-201ENST00000397477 HIST2H2BDQ6DRA6 164 aa8.05□□□□□ -1.12
CPSF1P1-201ENST00000397477 Q8N6K4 173 aa8.05□□□□□ -1.12
CPSF1P1-201ENST00000397477 IGSF10Q6WRI0 2623 aa8.05□□□□□ -1.12
CPSF1P1-201ENST00000397477 SLC50A1Q9BRV3 221 aa8.05□□□□□ -1.12
CPSF1P1-201ENST00000397477 TRBV7-1A0A0A6YYK4 115 aa8.05□□□□□ -1.12
CPSF1P1-201ENST00000397477 RAB9AP51151 201 aa8.05□□□□□ -1.12
CPSF1P1-201ENST00000397477 FAM74A4Q5TZK3 123 aa8.05□□□□□ -1.12
CPSF1P1-201ENST00000397477 TMEM160Q9NX00 188 aa8.05□□□□□ -1.12
CPSF1P1-201ENST00000397477 NPIPB6E9PJ23 425 aa8.04□□□□□ -1.12
CPSF1P1-201ENST00000397477 SMAD7O15105 426 aaKnown RBP8.04□□□□□ -1.12
CPSF1P1-201ENST00000397477 HBDP02042 147 aa8.04□□□□□ -1.12
CPSF1P1-201ENST00000397477 IFI27L1Q96BM0 104 aa8.04□□□□□ -1.12
CPSF1P1-201ENST00000397477 FOXC2Q99958 501 aa8.04□□□□□ -1.12
CPSF1P1-201ENST00000397477 NPFFR1Q9GZQ6 430 aa8.04□□□□□ -1.12
CPSF1P1-201ENST00000397477 NACAE9PAV3 2078 aa8.04□□□□□ -1.12
CPSF1P1-201ENST00000397477 RHPN1-AS1Q9BWJ2 59 aa8.04□□□□□ -1.12
CPSF1P1-201ENST00000397477 PRRC2AP48634 2157 aaKnown RBP8.04□□□□□ -1.12
CPSF1P1-201ENST00000397477 MSMBP08118 114 aa8.04□□□□□ -1.12
CPSF1P1-201ENST00000397477 ZNF688P0C7X2 276 aa8.04□□□□□ -1.12
CPSF1P1-201ENST00000397477 PET117Q6UWS5 81 aa8.04□□□□□ -1.12
CPSF1P1-201ENST00000397477 C11orf44Q8N8P7 122 aa8.04□□□□□ -1.12
CPSF1P1-201ENST00000397477 CTRLP40313 264 aa8.03□□□□□ -1.12
CPSF1P1-201ENST00000397477 KIR3DS1Q14943 382 aa8.03□□□□□ -1.12
CPSF1P1-201ENST00000397477 C14orf178Q8N769 122 aaPredicted RBP8.03□□□□□ -1.12
CPSF1P1-201ENST00000397477 ZNF747Q9BV97 191 aa8.03□□□□□ -1.12
CPSF1P1-201ENST00000397477 A0A1B0GW15 77 aa8.03□□□□□ -1.12
CPSF1P1-201ENST00000397477 FBLL1A6NHQ2 334 aaKnown RBP8.03□□□□□ -1.12
CPSF1P1-201ENST00000397477 GAGE1Q13065 139 aa8.03□□□□□ -1.12
CPSF1P1-201ENST00000397477 C10orf99Q6UWK7 81 aa8.03□□□□□ -1.12
CPSF1P1-201ENST00000397477 ZANQ9Y493 2812 aa8.03□□□□□ -1.12
CPSF1P1-201ENST00000397477 TNFRSF6BO95407 300 aa8.03□□□□□ -1.12
CPSF1P1-201ENST00000397477 IGHV4-59P01825 116 aa8.03□□□□□ -1.12
CPSF1P1-201ENST00000397477 SCGB2A2Q13296 93 aa8.03□□□□□ -1.12
CPSF1P1-201ENST00000397477 EBI3Q14213 229 aa8.02□□□□□ -1.13
CPSF1P1-201ENST00000397477 TMEM158Q8WZ71 300 aa8.02□□□□□ -1.13
CPSF1P1-201ENST00000397477 TTTY13Q9BZ97 58 aa8.02□□□□□ -1.13
CPSF1P1-201ENST00000397477 PRORYQ9H606 182 aa8.02□□□□□ -1.13
CPSF1P1-201ENST00000397477 ZFAND3Q9H8U3 227 aa8.02□□□□□ -1.13
CPSF1P1-201ENST00000397477 DKK2Q9UBU2 259 aa8.02□□□□□ -1.13
CPSF1P1-201ENST00000397477 TRAV8-6A0A0B4J262 113 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms