RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 BRWD1-AS2P59051 145 aa3.86□□□□□ -1.79
PCDH9-201ENST00000377861 CRIM1Q9NZV1 1036 aa3.86□□□□□ -1.79
PCDH9-201ENST00000377861 WDR86Q86TI4 376 aa3.86□□□□□ -1.79
PCDH9-201ENST00000377861 LRRC75A-AS1Q8N1F1 130 aa3.86□□□□□ -1.79
PCDH9-201ENST00000377861 BEX4Q9NWD9 120 aaPredicted RBP3.86□□□□□ -1.79
PCDH9-201ENST00000377861 PINLYPA6NC86 204 aa3.86□□□□□ -1.79
PCDH9-201ENST00000377861 STHQ8IWL8 128 aa3.86□□□□□ -1.79
PCDH9-201ENST00000377861 PRSS33Q8NF86 280 aa3.86□□□□□ -1.79
PCDH9-201ENST00000377861 CYYR1Q96J86 154 aa3.86□□□□□ -1.79
PCDH9-201ENST00000377861 SCN2AQ99250 2005 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 UNQ6494/PRO21346Q6UXR6 183 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 SCN3AQ9NY46 2000 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 NDUFC2-KCTD14E9PQ53 114 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 PROP1O75360 226 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 ZNF56Q15929 161 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 NFE4Q86UQ8 179 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 ERCC8Q13216 396 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 SDK1Q7Z5N4 2213 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 PSME4Q14997 1843 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 TRBV10-3A0A0K0K1G6 114 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 H3BVH4 76 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 MALP21145 153 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 CLEC19AQ6UXS0 136 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 KIF26BQ2KJY2 2108 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 UQCRQO14949 82 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 INSP01308 110 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 NDUFA12Q9UI09 145 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 ZFHX2Q9C0A1 2572 aaPredicted RBP3.85□□□□□ -1.79
PCDH9-201ENST00000377861 E7EQL1 145 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 PIKFYVEQ9Y2I7 2098 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 ODF3L1Q8IXM7 274 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 CD33P20138 364 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 MYO9BQ13459 2157 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 TRBV7-3A0A075B6L6 115 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 ZNF503Q96F45 646 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 OPRPNQ99935 248 aaPredicted RBP3.85□□□□□ -1.79
PCDH9-201ENST00000377861 CHCHD5Q9BSY4 110 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 PLA2G2EQ9NZK7 142 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 CNOT1A5YKK6 2376 aaKnown RBP3.85□□□□□ -1.79
PCDH9-201ENST00000377861 TEX22C9J3V5 150 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 POLEQ07864 2286 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 IGHV7-4-1A0A0J9YVY3 117 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 NDUFC2O95298 119 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 PATE2Q6UY27 113 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 ZNF524Q96C55 264 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 LINC01600Q96MT4 127 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 LINC01587Q99440 93 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 U3KQE9 123 aa3.85□□□□□ -1.79
PCDH9-201ENST00000377861 ARID1BQ8NFD5 2236 aaPredicted RBP3.85□□□□□ -1.79
PCDH9-201ENST00000377861 VWC2LB2RUY7 222 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 LPAL2Q16609 132 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 A0A087WV48 116 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 IBA57-AS1B1ANH7 110 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 GATA2P23769 480 aaPredicted RBP3.84□□□□□ -1.79
PCDH9-201ENST00000377861 ADORA2A-AS1P86434 159 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 IGKV1OR2-108A0A075B7D4 117 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 EGR1P18146 543 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 SAA4P35542 130 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 CELA2AP08217 269 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 ASCC3Q8N3C0 2202 aaKnown RBP3.84□□□□□ -1.79
PCDH9-201ENST00000377861 NDUFB1O75438 58 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 LINC00479Q96M42 142 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 CCL24O00175 119 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 FCN3O75636 299 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 EGR2P11161 476 aaPredicted RBP3.84□□□□□ -1.79
PCDH9-201ENST00000377861 SPATA25Q9BR10 227 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 MRPL35Q9NZE8 188 aaKnown RBP3.84□□□□□ -1.79
PCDH9-201ENST00000377861 Q8N7P7 452 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 ZNFX1Q9P2E3 1918 aaKnown RBP3.84□□□□□ -1.79
PCDH9-201ENST00000377861 TRAV3A0A0B4J244 114 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 A0A0G2JNJ9 132 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 Q9UFV3 132 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 GPHA2Q96T91 129 aa3.84□□□□□ -1.79
PCDH9-201ENST00000377861 DOCK5Q9H7D0 1870 aa3.84□□□□□ -1.8
PCDH9-201ENST00000377861 CELA3BP08861 270 aa3.84□□□□□ -1.8
PCDH9-201ENST00000377861 SAP30O75446 220 aa3.84□□□□□ -1.8
PCDH9-201ENST00000377861 ECSCRQ19T08 205 aa3.84□□□□□ -1.8
PCDH9-201ENST00000377861 NSUN5P1Q3KNT7 163 aa3.84□□□□□ -1.8
PCDH9-201ENST00000377861 ETDBQ3ZM63 59 aa3.84□□□□□ -1.8
PCDH9-201ENST00000377861 MYO16Q9Y6X6 1858 aa3.84□□□□□ -1.8
PCDH9-201ENST00000377861 MORN5Q5VZ52 161 aa3.84□□□□□ -1.8
PCDH9-201ENST00000377861 GPR179Q6PRD1 2367 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 ADAMTSL5Q6ZMM2 481 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 C20orf203Q8NBC4 194 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 V9GYY9 64 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 BRCA1P38398 1863 aaKnown RBP3.83□□□□□ -1.8
PCDH9-201ENST00000377861 WISP1O95388 367 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 GTSCR1Q86UQ5 136 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 TMEM243Q9BU79 118 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 ODF3BA8MYP8 253 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 FAM120AOSQ5T036 256 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 DUX4L9Q6RFH8 374 aaPredicted RBP3.83□□□□□ -1.8
PCDH9-201ENST00000377861 TAX1BP3O14907 124 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 NDUFA11Q86Y39 141 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 RCHY1Q96PM5 261 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 TFF2Q03403 129 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 RMI2Q96E14 147 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 JPT2Q9H910 190 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 CHD5Q8TDI0 1954 aa3.83□□□□□ -1.8
PCDH9-201ENST00000377861 EXOC3-AS1Q8N2X6 119 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms