RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 IGKCP01834 107 aa10.07□□□□□ -0.8
MSH5-204ENST00000375755 COX7A1P24310 79 aa10.07□□□□□ -0.8
MSH5-204ENST00000375755 LEPP41159 167 aa10.07□□□□□ -0.8
MSH5-204ENST00000375755 TCTEX1D4Q5JR98 221 aa10.07□□□□□ -0.8
MSH5-204ENST00000375755 PRO0461Q9UI25 63 aa10.07□□□□□ -0.8
MSH5-204ENST00000375755 CENPEQ02224 2701 aa10.07□□□□□ -0.8
MSH5-204ENST00000375755 RBP4P02753 201 aa10.07□□□□□ -0.8
MSH5-204ENST00000375755 PRSS1P07477 247 aa10.07□□□□□ -0.8
MSH5-204ENST00000375755 NPIPB5A8MRT5 1133 aa10.06□□□□□ -0.8
MSH5-204ENST00000375755 PPIFP30405 207 aaKnown RBP10.06□□□□□ -0.8
MSH5-204ENST00000375755 C12orf74Q32Q52 190 aa10.06□□□□□ -0.8
MSH5-204ENST00000375755 ZC2HC1BQ5TFG8 222 aa10.06□□□□□ -0.8
MSH5-204ENST00000375755 MAPKAPK5-AS1Q8N8E1 139 aa10.06□□□□□ -0.8
MSH5-204ENST00000375755 UBTD1Q9HAC8 227 aa10.06□□□□□ -0.8
MSH5-204ENST00000375755 IGKV1-17P01599 117 aa10.06□□□□□ -0.8
MSH5-204ENST00000375755 EVI2AP22794 236 aa10.06□□□□□ -0.8
MSH5-204ENST00000375755 TWIST1Q15672 202 aa10.06□□□□□ -0.8
MSH5-204ENST00000375755 GAGE13Q4V321 117 aa10.06□□□□□ -0.8
MSH5-204ENST00000375755 FOXC2Q99958 501 aa10.06□□□□□ -0.8
MSH5-204ENST00000375755 SHANK2-AS3Q9BTD1 123 aa10.06□□□□□ -0.8
MSH5-204ENST00000375755 AGRNO00468 2067 aa10.06□□□□□ -0.8
MSH5-204ENST00000375755 MRAP2Q96G30 205 aa10.05□□□□□ -0.8
MSH5-204ENST00000375755 RASL11BQ9BPW5 248 aa10.05□□□□□ -0.8
MSH5-204ENST00000375755 C20orf78Q9BR46 151 aa10.05□□□□□ -0.8
MSH5-204ENST00000375755 MSRB1Q9NZV6 116 aa10.05□□□□□ -0.8
MSH5-204ENST00000375755 ONECUT1Q9UBC0 465 aa10.05□□□□□ -0.8
MSH5-204ENST00000375755 SPG11Q96JI7 2443 aa10.05□□□□□ -0.8
MSH5-204ENST00000375755 H3BRN7 92 aa10.05□□□□□ -0.8
MSH5-204ENST00000375755 PRB1P04280 392 aa10.05□□□□□ -0.8
MSH5-204ENST00000375755 FCER1GP30273 86 aa10.05□□□□□ -0.8
MSH5-204ENST00000375755 SRSF1Q07955 248 aaKnown RBP eCLIP10.05□□□□□ -0.87e-7■■■□□ 15.3
MSH5-204ENST00000375755 PSMG4Q5JS54 123 aa10.05□□□□□ -0.8
MSH5-204ENST00000375755 KLF17Q5JT82 389 aaPredicted RBP10.05□□□□□ -0.8
MSH5-204ENST00000375755 ZNF502Q8TBZ5 544 aa10.05□□□□□ -0.8
MSH5-204ENST00000375755 RNF185Q96GF1 192 aa10.05□□□□□ -0.8
MSH5-204ENST00000375755 RAB1BQ9H0U4 201 aa10.05□□□□□ -0.8
MSH5-204ENST00000375755 LCNL1Q6ZST4 164 aa10.04□□□□□ -0.8
MSH5-204ENST00000375755 MAP1LC3AQ9H492 121 aa10.04□□□□□ -0.8
MSH5-204ENST00000375755 TEX22C9J3V5 150 aa10.04□□□□□ -0.8
MSH5-204ENST00000375755 MRPS12O15235 138 aaKnown RBP10.04□□□□□ -0.8
MSH5-204ENST00000375755 DPM2O94777 84 aa10.04□□□□□ -0.8
MSH5-204ENST00000375755 EGR2P11161 476 aaPredicted RBP10.04□□□□□ -0.8
MSH5-204ENST00000375755 KLRD1Q13241 179 aa10.04□□□□□ -0.8
MSH5-204ENST00000375755 ANXA2RQ3ZCQ2 193 aa10.04□□□□□ -0.8
MSH5-204ENST00000375755 LYPD1Q8N2G4 141 aa10.04□□□□□ -0.8
MSH5-204ENST00000375755 I3L2K1 104 aa10.03□□□□□ -0.8
MSH5-204ENST00000375755 SHISA2Q6UWI4 295 aa10.03□□□□□ -0.8
MSH5-204ENST00000375755 TMEM160Q9NX00 188 aa10.03□□□□□ -0.8
MSH5-204ENST00000375755 TRAV40A0A0B4J280 105 aa10.03□□□□□ -0.8
MSH5-204ENST00000375755 LINC01546A6NGU7 62 aa10.03□□□□□ -0.8
MSH5-204ENST00000375755 RRN3P1Q2M238 152 aa10.03□□□□□ -0.8
MSH5-204ENST00000375755 LINC00311Q8N616 119 aa10.03□□□□□ -0.8
MSH5-204ENST00000375755 CRYGBP07316 175 aa10.03□□□□□ -0.8
MSH5-204ENST00000375755 GATA1P15976 413 aaPredicted RBP10.03□□□□□ -0.8
MSH5-204ENST00000375755 TMEM158Q8WZ71 300 aa10.03□□□□□ -0.8
MSH5-204ENST00000375755 IGKV2-40A0A087WW87 121 aaPredicted RBP10.02□□□□□ -0.81
MSH5-204ENST00000375755 A0A1B0GWB2 263 aa10.02□□□□□ -0.81
MSH5-204ENST00000375755 IGKV2D-40P01614 121 aaPredicted RBP10.02□□□□□ -0.81
MSH5-204ENST00000375755 ZNF575Q86XF7 245 aa10.02□□□□□ -0.81
MSH5-204ENST00000375755 SIGLEC9Q9Y336 463 aa10.02□□□□□ -0.81
MSH5-204ENST00000375755 EPG5Q9HCE0 2579 aa10.02□□□□□ -0.81
MSH5-204ENST00000375755 ZNF462Q96JM2 2506 aa10.02□□□□□ -0.81
MSH5-204ENST00000375755 FBN2P35556 2912 aa10.02□□□□□ -0.81
MSH5-204ENST00000375755 IGLV1-47P01700 117 aa10.02□□□□□ -0.81
MSH5-204ENST00000375755 ZNF80P51504 273 aaPredicted RBP10.02□□□□□ -0.81
MSH5-204ENST00000375755 MRPL35Q9NZE8 188 aaKnown RBP10.02□□□□□ -0.81
MSH5-204ENST00000375755 TNFRSF6BO95407 300 aa10.01□□□□□ -0.81
MSH5-204ENST00000375755 IGLC6P0CF74 106 aa10.01□□□□□ -0.81
MSH5-204ENST00000375755 HLA-DRB4P13762 266 aa10.01□□□□□ -0.81
MSH5-204ENST00000375755 CDIP1Q9H305 208 aa10.01□□□□□ -0.81
MSH5-204ENST00000375755 HLA-DRB4X5D2U9 266 aa10.01□□□□□ -0.81
MSH5-204ENST00000375755 ZFP36P26651 326 aaKnown RBP10.01□□□□□ -0.81
MSH5-204ENST00000375755 TAL2Q16559 108 aa10.01□□□□□ -0.81
MSH5-204ENST00000375755 SFTA2Q6UW10 78 aa10.01□□□□□ -0.81
MSH5-204ENST00000375755 TTC9CQ8N5M4 171 aa10.01□□□□□ -0.81
MSH5-204ENST00000375755 ZNF491Q8N8L2 437 aa10.01□□□□□ -0.81
MSH5-204ENST00000375755 HIST1H4GQ99525 98 aa10.01□□□□□ -0.81
MSH5-204ENST00000375755 MRPL16Q9NX20 251 aaKnown RBP10.01□□□□□ -0.81
MSH5-204ENST00000375755 BUB1B-PAK6H3BSN5 160 aa10.01□□□□□ -0.81
MSH5-204ENST00000375755 APOMO95445 188 aa10.01□□□□□ -0.81
MSH5-204ENST00000375755 C8orf86Q6ZUL3 223 aa10.01□□□□□ -0.81
MSH5-204ENST00000375755 Q8TAT8 98 aa10.01□□□□□ -0.81
MSH5-204ENST00000375755 ATP5LO75964 103 aa10□□□□□ -0.81
MSH5-204ENST00000375755 IL4P05112 153 aa10□□□□□ -0.81
MSH5-204ENST00000375755 DTX2Q86UW9 622 aa10□□□□□ -0.81
MSH5-204ENST00000375755 TMEM190Q8WZ59 177 aa10□□□□□ -0.81
MSH5-204ENST00000375755 RNF125Q96EQ8 232 aa10□□□□□ -0.81
MSH5-204ENST00000375755 NXT2Q9NPJ8 142 aaKnown RBP10□□□□□ -0.81
MSH5-204ENST00000375755 CNIH1O95406 144 aa10□□□□□ -0.81
MSH5-204ENST00000375755 C8orf31Q8N9H6 132 aa10□□□□□ -0.81
MSH5-204ENST00000375755 SYT8Q8NBV8 401 aa10□□□□□ -0.81
MSH5-204ENST00000375755 RNF183Q96D59 192 aa10□□□□□ -0.81
MSH5-204ENST00000375755 PRR25Q96S07 402 aa10□□□□□ -0.81
MSH5-204ENST00000375755 TRBV7-3A0A075B6L6 115 aa9.99□□□□□ -0.81
MSH5-204ENST00000375755 FOXI1Q12951 378 aa9.99□□□□□ -0.81
MSH5-204ENST00000375755 FBXL15Q9H469 300 aa9.99□□□□□ -0.81
MSH5-204ENST00000375755 AAMDCQ9H7C9 122 aa9.99□□□□□ -0.81
MSH5-204ENST00000375755 IGHV1-3A0A0C4DH29 117 aa9.99□□□□□ -0.81
MSH5-204ENST00000375755 K7EIM0 57 aa9.99□□□□□ -0.81
MSH5-204ENST00000375755 SMCPP49901 116 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms