RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 PRO1854Q9UHT4 67 aa12.64□□□□□ -0.39
CLSTN1-201ENST00000361311 LOXP28300 417 aaPredicted RBP12.64□□□□□ -0.39
CLSTN1-201ENST00000361311 SRSF6Q13247 344 aaKnown RBP12.64□□□□□ -0.39
CLSTN1-201ENST00000361311 GAGE5Q13069 117 aa12.64□□□□□ -0.39
CLSTN1-201ENST00000361311 GAGE6Q13070 117 aa12.64□□□□□ -0.39
CLSTN1-201ENST00000361311 ABHD17AQ96GS6 310 aa12.64□□□□□ -0.39
CLSTN1-201ENST00000361311 LINC00477Q96M19 166 aa12.64□□□□□ -0.39
CLSTN1-201ENST00000361311 SS18L2Q9UHA2 77 aa12.64□□□□□ -0.39
CLSTN1-201ENST00000361311 SLC25A20O43772 301 aa12.63□□□□□ -0.39
CLSTN1-201ENST00000361311 PRSS22Q9GZN4 317 aa12.63□□□□□ -0.39
CLSTN1-201ENST00000361311 TP53TG1Q9Y2A0 90 aa12.63□□□□□ -0.39
CLSTN1-201ENST00000361311 IGLV3-9A0A075B6K5 115 aa12.63□□□□□ -0.39
CLSTN1-201ENST00000361311 TEX36Q5VZQ5 186 aa12.63□□□□□ -0.39
CLSTN1-201ENST00000361311 MSRB1Q9NZV6 116 aa12.63□□□□□ -0.39
CLSTN1-201ENST00000361311 OR13C6PQ8NH95 151 aa12.63□□□□□ -0.39
CLSTN1-201ENST00000361311 HCFC1P51610 2035 aa12.63□□□□□ -0.39
CLSTN1-201ENST00000361311 LOXL1Q08397 574 aaPredicted RBP12.63□□□□□ -0.39
CLSTN1-201ENST00000361311 SPANXA1Q9NS26 97 aa12.63□□□□□ -0.39
CLSTN1-201ENST00000361311 LINC00527Q9UJ94 153 aa12.63□□□□□ -0.39
CLSTN1-201ENST00000361311 ZNF672Q499Z4 452 aaPredicted RBP12.62□□□□□ -0.39
CLSTN1-201ENST00000361311 SPRNQ5BIV9 151 aa12.62□□□□□ -0.39
CLSTN1-201ENST00000361311 GAGE12JA6NER3 117 aa12.62□□□□□ -0.39
CLSTN1-201ENST00000361311 GAGE7O76087 117 aa12.62□□□□□ -0.39
CLSTN1-201ENST00000361311 GAGE12FP0CL80 117 aa12.62□□□□□ -0.39
CLSTN1-201ENST00000361311 GAGE12GP0CL81 117 aa12.62□□□□□ -0.39
CLSTN1-201ENST00000361311 GAGE12IP0CL82 117 aa12.62□□□□□ -0.39
CLSTN1-201ENST00000361311 FGF6P10767 208 aa12.62□□□□□ -0.39
CLSTN1-201ENST00000361311 GAGE4Q13068 117 aa12.62□□□□□ -0.39
CLSTN1-201ENST00000361311 EIF4EBP1Q13541 118 aaPredicted RBP12.62□□□□□ -0.39
CLSTN1-201ENST00000361311 DYNLRB2Q8TF09 96 aa12.62□□□□□ -0.39
CLSTN1-201ENST00000361311 E7EUB6 86 aa12.62□□□□□ -0.39
CLSTN1-201ENST00000361311 UBE2L6O14933 153 aa12.62□□□□□ -0.39
CLSTN1-201ENST00000361311 IFITM1P13164 125 aa12.62□□□□□ -0.39
CLSTN1-201ENST00000361311 C8orf86Q6ZUL3 223 aa12.62□□□□□ -0.39
CLSTN1-201ENST00000361311 RNASE1P07998 156 aaKnown RBP12.61□□□□□ -0.39
CLSTN1-201ENST00000361311 TCF15Q12870 199 aa12.61□□□□□ -0.39
CLSTN1-201ENST00000361311 DAZAP2Q15038 168 aaPredicted RBP12.61□□□□□ -0.39
CLSTN1-201ENST00000361311 DSCAML1Q8TD84 2053 aa12.61□□□□□ -0.39
CLSTN1-201ENST00000361311 C2orf16Q68DN1 1984 aa12.61□□□□□ -0.39
CLSTN1-201ENST00000361311 IGHV3OR16-12A0A075B7B8 117 aa12.61□□□□□ -0.39
CLSTN1-201ENST00000361311 H3BMM0 161 aa12.61□□□□□ -0.39
CLSTN1-201ENST00000361311 ZNF876PQ49A33 203 aa12.61□□□□□ -0.39
CLSTN1-201ENST00000361311 UBE2WQ96B02 151 aa12.61□□□□□ -0.39
CLSTN1-201ENST00000361311 DYSFO75923 2080 aa12.61□□□□□ -0.39
CLSTN1-201ENST00000361311 TRAV8-3A0A0A6YYJ7 113 aa12.61□□□□□ -0.39
CLSTN1-201ENST00000361311 PMVKQ15126 192 aa12.61□□□□□ -0.39
CLSTN1-201ENST00000361311 ANXA2RQ3ZCQ2 193 aa12.61□□□□□ -0.39
CLSTN1-201ENST00000361311 IGKV1-17P01599 117 aa12.61□□□□□ -0.39
CLSTN1-201ENST00000361311 VMO1Q7Z5L0 202 aa12.61□□□□□ -0.39
CLSTN1-201ENST00000361311 IGKV3OR2-268A0A0C4DH90 116 aa12.6□□□□□ -0.39
CLSTN1-201ENST00000361311 HLA-DMBP28068 263 aa12.6□□□□□ -0.39
CLSTN1-201ENST00000361311 A0A087WWL8 130 aa12.6□□□□□ -0.39
CLSTN1-201ENST00000361311 SRD5A1P18405 259 aa12.6□□□□□ -0.39
CLSTN1-201ENST00000361311 CRYBA4P53673 196 aa12.6□□□□□ -0.39
CLSTN1-201ENST00000361311 SP5Q6BEB4 398 aaPredicted RBP12.6□□□□□ -0.39
CLSTN1-201ENST00000361311 MLST8Q9BVC4 326 aa12.59□□□□□ -0.39
CLSTN1-201ENST00000361311 TRBV7-9A0A0J9YWB2 115 aa12.59□□□□□ -0.39
CLSTN1-201ENST00000361311 LHBP01229 141 aa12.59□□□□□ -0.39
CLSTN1-201ENST00000361311 Q8N7P7 452 aa12.59□□□□□ -0.39
CLSTN1-201ENST00000361311 NTN5Q8WTR8 489 aaPredicted RBP12.59□□□□□ -0.39
CLSTN1-201ENST00000361311 SPAG8Q99932 426 aaPredicted RBP12.59□□□□□ -0.39
CLSTN1-201ENST00000361311 SPXQ9BT56 116 aa12.59□□□□□ -0.39
CLSTN1-201ENST00000361311 PRSS29PA6NIE9 313 aa12.59□□□□□ -0.39
CLSTN1-201ENST00000361311 FOXI1Q12951 378 aa12.59□□□□□ -0.39
CLSTN1-201ENST00000361311 ODF1Q14990 250 aa12.59□□□□□ -0.39
CLSTN1-201ENST00000361311 PTPRQQ9UMZ3 2332 aa12.58□□□□□ -0.39
CLSTN1-201ENST00000361311 TMEM101Q96IK0 257 aa12.58□□□□□ -0.4
CLSTN1-201ENST00000361311 NEGR1Q7Z3B1 354 aa12.58□□□□□ -0.4
CLSTN1-201ENST00000361311 COL8A2P25067 703 aa12.57□□□□□ -0.4
CLSTN1-201ENST00000361311 TIMM21Q9BVV7 248 aa12.57□□□□□ -0.4
CLSTN1-201ENST00000361311 TEN1Q86WV5 123 aa12.57□□□□□ -0.4
CLSTN1-201ENST00000361311 TOMM7Q9P0U1 55 aa12.57□□□□□ -0.4
CLSTN1-201ENST00000361311 CENPFP49454 3210 aa12.57□□□□□ -0.4
CLSTN1-201ENST00000361311 OOSP1A8MZH6 123 aa12.57□□□□□ -0.4
CLSTN1-201ENST00000361311 KIAA1549Q9HCM3 1950 aa12.57□□□□□ -0.4
CLSTN1-201ENST00000361311 IGKV1D-37A0A075B6S9 117 aa12.57□□□□□ -0.4
CLSTN1-201ENST00000361311 DYNAPQ8N1N2 210 aa12.57□□□□□ -0.4
CLSTN1-201ENST00000361311 DUX3Q96PT4 197 aa12.57□□□□□ -0.4
CLSTN1-201ENST00000361311 INS-IGF2F8WCM5 200 aa12.56□□□□□ -0.4
CLSTN1-201ENST00000361311 CR1LQ2VPA4 569 aa12.56□□□□□ -0.4
CLSTN1-201ENST00000361311 DUX5Q96PT3 197 aa12.56□□□□□ -0.4
CLSTN1-201ENST00000361311 C20orf78Q9BR46 151 aa12.56□□□□□ -0.4
CLSTN1-201ENST00000361311 C9orf153Q5TBE3 101 aa12.55□□□□□ -0.4
CLSTN1-201ENST00000361311 TRAV41A0A0B4J266 112 aa12.55□□□□□ -0.4
CLSTN1-201ENST00000361311 J3QQQ9 107 aa12.55□□□□□ -0.4
CLSTN1-201ENST00000361311 COX6B1P14854 86 aa12.55□□□□□ -0.4
CLSTN1-201ENST00000361311 TMEM141Q96I45 108 aa12.55□□□□□ -0.4
CLSTN1-201ENST00000361311 ATG2AQ2TAZ0 1938 aa12.55□□□□□ -0.4
CLSTN1-201ENST00000361311 TRBV7-1A0A0A6YYK4 115 aa12.55□□□□□ -0.4
CLSTN1-201ENST00000361311 UTF1Q5T230 341 aa12.55□□□□□ -0.4
CLSTN1-201ENST00000361311 C2orf91Q6ZV80 131 aa12.55□□□□□ -0.4
CLSTN1-201ENST00000361311 C15orf53Q8NAA6 179 aa12.55□□□□□ -0.4
CLSTN1-201ENST00000361311 RITA1Q96K30 269 aa12.55□□□□□ -0.4
CLSTN1-201ENST00000361311 MINOS1Q5TGZ0 78 aa12.55□□□□□ -0.4
CLSTN1-201ENST00000361311 CFHR4Q92496 578 aa12.55□□□□□ -0.4
CLSTN1-201ENST00000361311 MINOS1-NBL1R4GNA1 71 aa12.55□□□□□ -0.4
CLSTN1-201ENST00000361311 NAV3Q8IVL0 2385 aa12.54□□□□□ -0.4
CLSTN1-201ENST00000361311 I3L2K1 104 aa12.54□□□□□ -0.4
CLSTN1-201ENST00000361311 A0A0G2JNJ9 132 aa12.54□□□□□ -0.4
CLSTN1-201ENST00000361311 SDHAF1A6NFY7 115 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms