RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 C8orf4Q9NR00 106 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 KMT2DO14686 5537 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 IGHV3-73A0A0B4J1V6 119 aa6.34□□□□□ -1.39
ATXN3-201ENST00000340660 PMS2P5A8MQ11 134 aa6.34□□□□□ -1.39
ATXN3-201ENST00000340660 MRPS12O15235 138 aaKnown RBP6.34□□□□□ -1.39
ATXN3-201ENST00000340660 ZNF253O75346 499 aa6.34□□□□□ -1.39
ATXN3-201ENST00000340660 WBP4O75554 376 aaKnown RBP6.34□□□□□ -1.39
ATXN3-201ENST00000340660 HSMCR30P0CW71 290 aa6.34□□□□□ -1.39
ATXN3-201ENST00000340660 RAB31Q13636 194 aa6.34□□□□□ -1.39
ATXN3-201ENST00000340660 MZT2AQ6P582 158 aa6.34□□□□□ -1.39
ATXN3-201ENST00000340660 ZNF2Q9BSG1 426 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-201ENST00000340660 RPP21Q9H633 154 aaKnown RBP6.34□□□□□ -1.39
ATXN3-201ENST00000340660 CARHSP1Q9Y2V2 147 aaKnown RBP6.34□□□□□ -1.39
ATXN3-201ENST00000340660 V9GY05 133 aa6.34□□□□□ -1.39
ATXN3-201ENST00000340660 AKR1C2P52895 323 aa6.33□□□□□ -1.4
ATXN3-201ENST00000340660 MIAQ16674 131 aa6.33□□□□□ -1.4
ATXN3-201ENST00000340660 TRIM16LQ309B1 348 aa6.33□□□□□ -1.4
ATXN3-201ENST00000340660 AARDQ4LEZ3 155 aa6.33□□□□□ -1.4
ATXN3-201ENST00000340660 MUC21Q5SSG8 566 aa6.33□□□□□ -1.4
ATXN3-201ENST00000340660 ZFAND2AQ8N6M9 145 aa6.33□□□□□ -1.4
ATXN3-201ENST00000340660 ANKRD65E5RJM6 399 aa6.32□□□□□ -1.4
ATXN3-201ENST00000340660 H3BTX0 84 aa6.32□□□□□ -1.4
ATXN3-201ENST00000340660 GABARAPH6UMI1 98 aa6.32□□□□□ -1.4
ATXN3-201ENST00000340660 GABARAPO95166 117 aa6.32□□□□□ -1.4
ATXN3-201ENST00000340660 CFDP00746 253 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-201ENST00000340660 GPX1P07203 203 aa6.32□□□□□ -1.4
ATXN3-201ENST00000340660 CXCL2P19875 107 aa6.32□□□□□ -1.4
ATXN3-201ENST00000340660 GGNBP1Q5YKI7 109 aa6.32□□□□□ -1.4
ATXN3-201ENST00000340660 PRR27Q6MZM9 219 aa6.32□□□□□ -1.4
ATXN3-201ENST00000340660 DHRS11Q6UWP2 260 aa6.32□□□□□ -1.4
ATXN3-201ENST00000340660 LCN15Q6UWW0 184 aa6.32□□□□□ -1.4
ATXN3-201ENST00000340660 LINC00173Q6ZV60 143 aa6.32□□□□□ -1.4
ATXN3-201ENST00000340660 OR5AP2Q8NGF4 316 aa6.32□□□□□ -1.4
ATXN3-201ENST00000340660 TMEM80Q96HE8 168 aa6.32□□□□□ -1.4
ATXN3-201ENST00000340660 SLC50A1Q9BRV3 221 aa6.32□□□□□ -1.4
ATXN3-201ENST00000340660 SAMD10Q9BYL1 202 aa6.32□□□□□ -1.4
ATXN3-201ENST00000340660 M0R2P5 195 aa6.31□□□□□ -1.4
ATXN3-201ENST00000340660 CRISP2P16562 243 aa6.31□□□□□ -1.4
ATXN3-201ENST00000340660 CYCSP99999 105 aaKnown RBP6.31□□□□□ -1.4
ATXN3-201ENST00000340660 SS18Q15532 418 aa6.31□□□□□ -1.4
ATXN3-201ENST00000340660 BAK1Q16611 211 aa6.31□□□□□ -1.4
ATXN3-201ENST00000340660 KCNIP4Q6PIL6 250 aa6.31□□□□□ -1.4
ATXN3-201ENST00000340660 TMEM91Q6ZNR0 172 aa6.31□□□□□ -1.4
ATXN3-201ENST00000340660 ANP32BQ92688 251 aaKnown RBP6.31□□□□□ -1.4
ATXN3-201ENST00000340660 AUNIPQ9H7T9 357 aa6.31□□□□□ -1.4
ATXN3-201ENST00000340660 C5orf51A6NDU8 294 aa6.3□□□□□ -1.4
ATXN3-201ENST00000340660 EFCAB10A6NFE3 127 aa6.3□□□□□ -1.4
ATXN3-201ENST00000340660 CFC1P0CG37 223 aa6.3□□□□□ -1.4
ATXN3-201ENST00000340660 UBE2MP61081 183 aaKnown RBP6.3□□□□□ -1.4
ATXN3-201ENST00000340660 CFAP126Q5VTH2 177 aa6.3□□□□□ -1.4
ATXN3-201ENST00000340660 LINC00337Q8N6G1 96 aa6.3□□□□□ -1.4
ATXN3-201ENST00000340660 LINC00474Q9P2X8 69 aa6.3□□□□□ -1.4
ATXN3-201ENST00000340660 IRGMA1A4Y4 181 aa6.29□□□□□ -1.4
ATXN3-201ENST00000340660 CEBPZOSA8MTT3 80 aa6.29□□□□□ -1.4
ATXN3-201ENST00000340660 ANGP03950 147 aaKnown RBP6.29□□□□□ -1.4
ATXN3-201ENST00000340660 GPX4P36969 197 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-201ENST00000340660 RANBP1P43487 201 aa6.29□□□□□ -1.4
ATXN3-201ENST00000340660 RPS10P46783 165 aaKnown RBP6.29□□□□□ -1.4
ATXN3-201ENST00000340660 INPP1P49441 399 aa6.29□□□□□ -1.4
ATXN3-201ENST00000340660 KRTAP13-3Q3SY46 172 aa6.29□□□□□ -1.4
ATXN3-201ENST00000340660 MPV17L2Q567V2 206 aa6.29□□□□□ -1.4
ATXN3-201ENST00000340660 CLPSL2Q6UWE3 100 aa6.29□□□□□ -1.4
ATXN3-201ENST00000340660 SAT2Q96F10 170 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-201ENST00000340660 CCDC90BQ9GZT6 254 aa6.29□□□□□ -1.4
ATXN3-201ENST00000340660 DIABLOQ9NR28 239 aa6.29□□□□□ -1.4
ATXN3-201ENST00000340660 FAM24AA6NFZ4 105 aa6.28□□□□□ -1.4
ATXN3-201ENST00000340660 PRYO14603 147 aa6.28□□□□□ -1.4
ATXN3-201ENST00000340660 CASQ2O14958 399 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-201ENST00000340660 S100A7P31151 101 aa6.28□□□□□ -1.4
ATXN3-201ENST00000340660 LHFPL5Q8TAF8 219 aa6.28□□□□□ -1.4
ATXN3-201ENST00000340660 NAA50Q9GZZ1 169 aaKnown RBP6.28□□□□□ -1.4
ATXN3-201ENST00000340660 AGPAT4-IT1Q9H0P7 198 aa6.28□□□□□ -1.4
ATXN3-201ENST00000340660 IFITM5A6NNB3 132 aa6.27□□□□□ -1.41
ATXN3-201ENST00000340660 SCGB1D2O95969 90 aa6.27□□□□□ -1.41
ATXN3-201ENST00000340660 KRTAP2-3P0C7H8 128 aa6.27□□□□□ -1.41
ATXN3-201ENST00000340660 MGST1P10620 155 aaKnown RBP6.27□□□□□ -1.41
ATXN3-201ENST00000340660 KRTAP19-6Q3LI70 58 aa6.27□□□□□ -1.41
ATXN3-201ENST00000340660 LCE1EQ5T753 118 aa6.27□□□□□ -1.41
ATXN3-201ENST00000340660 KRTAP2-4Q9BYR9 128 aa6.27□□□□□ -1.41
ATXN3-201ENST00000340660 SRRQ9GZT4 340 aa6.27□□□□□ -1.41
ATXN3-201ENST00000340660 PRR34Q9NV39 138 aa6.27□□□□□ -1.41
ATXN3-201ENST00000340660 HIGD1AQ9Y241 93 aa6.27□□□□□ -1.41
ATXN3-201ENST00000340660 ORC6Q9Y5N6 252 aa6.27□□□□□ -1.41
ATXN3-201ENST00000340660 A0A087X002 238 aa6.26□□□□□ -1.41
ATXN3-201ENST00000340660 TMEM262E9PQX1 116 aa6.26□□□□□ -1.41
ATXN3-201ENST00000340660 MYL12BO14950 172 aa6.26□□□□□ -1.41
ATXN3-201ENST00000340660 TNFAIP8O95379 198 aa6.26□□□□□ -1.41
ATXN3-201ENST00000340660 ZNF876PQ49A33 203 aa6.26□□□□□ -1.41
ATXN3-201ENST00000340660 GPR107Q5VW38 600 aa6.26□□□□□ -1.41
ATXN3-201ENST00000340660 ACOT7LQ6ZUV0 252 aa6.26□□□□□ -1.41
ATXN3-201ENST00000340660 MRPL53Q96EL3 112 aaKnown RBP6.26□□□□□ -1.41
ATXN3-201ENST00000340660 TP53RKQ96S44 253 aa6.26□□□□□ -1.41
ATXN3-201ENST00000340660 MGLLQ99685 303 aa6.26□□□□□ -1.41
ATXN3-201ENST00000340660 A0A1W2PNN7 141 aa6.25□□□□□ -1.41
ATXN3-201ENST00000340660 NMBP08949 121 aa6.25□□□□□ -1.41
ATXN3-201ENST00000340660 S100GP29377 79 aa6.25□□□□□ -1.41
ATXN3-201ENST00000340660 C15orf56Q8N910 161 aa6.25□□□□□ -1.41
ATXN3-201ENST00000340660 OR1S1Q8NH92 325 aa6.25□□□□□ -1.41
ATXN3-201ENST00000340660 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-201ENST00000340660 LINC00846Q9NV44 126 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms