RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 A0A1B0GWB2 263 aa12.94□□□□□ -0.34
PRDM8-201ENST00000339711 C8orf49Q96NF6 230 aa12.94□□□□□ -0.34
PRDM8-201ENST00000339711 IGLV11-55A0A075B6I3 123 aa12.94□□□□□ -0.34
PRDM8-201ENST00000339711 H3BRN7 92 aa12.94□□□□□ -0.34
PRDM8-201ENST00000339711 IGHV4-38-2P0DP08 117 aa12.94□□□□□ -0.34
PRDM8-201ENST00000339711 RIPPLY3P57055 190 aa12.94□□□□□ -0.34
PRDM8-201ENST00000339711 PSG3Q16557 428 aa12.94□□□□□ -0.34
PRDM8-201ENST00000339711 IGLL1P15814 213 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 TMEM14CQ9P0S9 112 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 CRYGBP07316 175 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 IGLC2P0DOY2 106 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 IGLC3P0DOY3 106 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 SNRPD3P62318 126 aaKnown RBP12.93□□□□□ -0.34
PRDM8-201ENST00000339711 PDE6HQ13956 83 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 CD300EQ496F6 205 aaPredicted RBP12.93□□□□□ -0.34
PRDM8-201ENST00000339711 SYT8Q8NBV8 401 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 OR2K2Q8NGT1 345 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 MRPL27Q9P0M9 148 aaKnown RBP12.93□□□□□ -0.34
PRDM8-201ENST00000339711 IGKV3D-20A0A0C4DH25 116 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 EMP1P54849 157 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 Q5PR19 223 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 C20orf144Q9BQM9 153 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 IGHV3-64A0A075B6Q5 118 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 TMEM75Q8N9X5 138 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 OR4X2Q8NGF9 303 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 ORAOV1Q8WV07 137 aa12.93□□□□□ -0.34
PRDM8-201ENST00000339711 FAM223BA6NKX1 122 aa12.92□□□□□ -0.34
PRDM8-201ENST00000339711 FAM223AQ8IWN6 122 aa12.92□□□□□ -0.34
PRDM8-201ENST00000339711 USMG5Q96IX5 58 aa12.92□□□□□ -0.34
PRDM8-201ENST00000339711 MUC3AQ02505 3323 aa12.92□□□□□ -0.34
PRDM8-201ENST00000339711 SIGLEC15Q6ZMC9 328 aa12.92□□□□□ -0.34
PRDM8-201ENST00000339711 ZNF503Q96F45 646 aa12.92□□□□□ -0.34
PRDM8-201ENST00000339711 ZC2HC1BQ5TFG8 222 aa12.91□□□□□ -0.34
PRDM8-201ENST00000339711 TMEM190Q8WZ59 177 aa12.91□□□□□ -0.34
PRDM8-201ENST00000339711 ZNF688P0C7X2 276 aa12.91□□□□□ -0.34
PRDM8-201ENST00000339711 BOD1L1Q8NFC6 3051 aa12.91□□□□□ -0.34
PRDM8-201ENST00000339711 C14orf178Q8N769 122 aaPredicted RBP12.91□□□□□ -0.34
PRDM8-201ENST00000339711 PYGO2Q9BRQ0 406 aa12.91□□□□□ -0.34
PRDM8-201ENST00000339711 NXT2Q9NPJ8 142 aaKnown RBP12.91□□□□□ -0.34
PRDM8-201ENST00000339711 DPM2O94777 84 aa12.9□□□□□ -0.34
PRDM8-201ENST00000339711 NPIPB6E9PJ23 425 aa12.9□□□□□ -0.34
PRDM8-201ENST00000339711 BCL6BQ8N143 479 aaPredicted RBP12.9□□□□□ -0.34
PRDM8-201ENST00000339711 GP9P14770 177 aa12.9□□□□□ -0.34
PRDM8-201ENST00000339711 RASL11AQ6T310 242 aa12.9□□□□□ -0.34
PRDM8-201ENST00000339711 LCNL1Q6ZST4 164 aa12.9□□□□□ -0.34
PRDM8-201ENST00000339711 PIP4P2Q8N4L2 257 aa12.9□□□□□ -0.34
PRDM8-201ENST00000339711 FANCD2OSQ96PS1 177 aa12.9□□□□□ -0.34
PRDM8-201ENST00000339711 RAI1Q7Z5J4 1906 aaPredicted RBP12.9□□□□□ -0.34
PRDM8-201ENST00000339711 A0A0U1RRA0 63 aa12.89□□□□□ -0.35
PRDM8-201ENST00000339711 TMEM158Q8WZ71 300 aa12.89□□□□□ -0.35
PRDM8-201ENST00000339711 SMIM12Q96EX1 92 aa12.89□□□□□ -0.35
PRDM8-201ENST00000339711 C1orf159Q96HA4 380 aa12.89□□□□□ -0.35
PRDM8-201ENST00000339711 A0A1W2PRX2 142 aa12.89□□□□□ -0.35
PRDM8-201ENST00000339711 HLA-DMBP28068 263 aa12.89□□□□□ -0.35
PRDM8-201ENST00000339711 GEMIN7Q9H840 131 aaKnown RBP12.89□□□□□ -0.35
PRDM8-201ENST00000339711 PPBPP02775 128 aa12.88□□□□□ -0.35
PRDM8-201ENST00000339711 PRSS57Q6UWY2 283 aa12.88□□□□□ -0.35
PRDM8-201ENST00000339711 Q96MF0 132 aa12.88□□□□□ -0.35
PRDM8-201ENST00000339711 SPRY2O43597 315 aa12.88□□□□□ -0.35
PRDM8-201ENST00000339711 IGKCP01834 107 aa12.88□□□□□ -0.35
PRDM8-201ENST00000339711 CTSGP08311 255 aa12.88□□□□□ -0.35
PRDM8-201ENST00000339711 PSMG4Q5JS54 123 aa12.87□□□□□ -0.35
PRDM8-201ENST00000339711 CYSLTR1Q9Y271 337 aa12.87□□□□□ -0.35
PRDM8-201ENST00000339711 TRAV21A0A0B4J279 112 aa12.87□□□□□ -0.35
PRDM8-201ENST00000339711 SRSF1Q07955 248 aaKnown RBP eCLIP12.87□□□□□ -0.35
PRDM8-201ENST00000339711 FAM231DQ6ZW35 169 aa12.87□□□□□ -0.35
PRDM8-201ENST00000339711 YAE1D1Q9NRH1 226 aa12.87□□□□□ -0.35
PRDM8-201ENST00000339711 IGHV3-73A0A0B4J1V6 119 aa12.87□□□□□ -0.35
PRDM8-201ENST00000339711 C5orf56Q8N8D9 126 aa12.87□□□□□ -0.35
PRDM8-201ENST00000339711 ZC2HC1AQ96GY0 325 aa12.87□□□□□ -0.35
PRDM8-201ENST00000339711 BLCAPP62952 87 aa12.86□□□□□ -0.35
PRDM8-201ENST00000339711 SMIM27A0A1W2PRY6 76 aa12.86□□□□□ -0.35
PRDM8-201ENST00000339711 OVOL3O00110 214 aa12.86□□□□□ -0.35
PRDM8-201ENST00000339711 SUMO2P61956 95 aaKnown RBP12.86□□□□□ -0.35
PRDM8-201ENST00000339711 UBE2V1Q13404 147 aa12.86□□□□□ -0.35
PRDM8-201ENST00000339711 J3QLI3 93 aa12.86□□□□□ -0.35
PRDM8-201ENST00000339711 DEFB112Q30KQ8 113 aa12.86□□□□□ -0.35
PRDM8-201ENST00000339711 IGHV1-24A0A0C4DH33 117 aa12.85□□□□□ -0.35
PRDM8-201ENST00000339711 LINC00173Q6ZV60 143 aa12.85□□□□□ -0.35
PRDM8-201ENST00000339711 FN1P02751 2386 aaKnown RBP12.85□□□□□ -0.35
PRDM8-201ENST00000339711 DMXL1Q9Y485 3027 aa12.85□□□□□ -0.35
PRDM8-201ENST00000339711 TET2Q6N021 2002 aaPredicted RBP12.85□□□□□ -0.35
PRDM8-201ENST00000339711 ZNF815PA8K554 130 aa12.85□□□□□ -0.35
PRDM8-201ENST00000339711 IGHV4-59P01825 116 aa12.85□□□□□ -0.35
PRDM8-201ENST00000339711 PAX1P15863 534 aa12.85□□□□□ -0.35
PRDM8-201ENST00000339711 COA6Q5JTJ3 125 aaKnown RBP12.85□□□□□ -0.35
PRDM8-201ENST00000339711 DUX3Q96PT4 197 aa12.85□□□□□ -0.35
PRDM8-201ENST00000339711 MTORP42345 2549 aa12.85□□□□□ -0.35
PRDM8-201ENST00000339711 TRAV12-3A0A0B4J271 114 aa12.85□□□□□ -0.35
PRDM8-201ENST00000339711 MTURNQ8N3F0 131 aa12.85□□□□□ -0.35
PRDM8-201ENST00000339711 MS4A6AQ9H2W1 248 aa12.85□□□□□ -0.35
PRDM8-201ENST00000339711 ZNF492Q9P255 531 aa12.85□□□□□ -0.35
PRDM8-201ENST00000339711 TNFRSF18Q9Y5U5 241 aa12.85□□□□□ -0.35
PRDM8-201ENST00000339711 MEIG1Q5JSS6 88 aa12.84□□□□□ -0.35
PRDM8-201ENST00000339711 RHPN1-AS1Q9BWJ2 59 aa12.84□□□□□ -0.35
PRDM8-201ENST00000339711 EBI3Q14213 229 aa12.84□□□□□ -0.35
PRDM8-201ENST00000339711 C9orf139Q6ZV77 190 aa12.84□□□□□ -0.35
PRDM8-201ENST00000339711 RAX2Q96IS3 184 aa12.84□□□□□ -0.35
PRDM8-201ENST00000339711 COX11Q9Y6N1 276 aa12.84□□□□□ -0.35
PRDM8-201ENST00000339711 A0A087WWL8 130 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms