RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 C2orf66Q6UXQ4 117 aa12.78□□□□□ -0.36
UBR3-201ENST00000272793 TMEM61Q8N0U2 210 aa12.78□□□□□ -0.36
UBR3-201ENST00000272793 A0A0J9YY99 117 aa12.78□□□□□ -0.36
UBR3-201ENST00000272793 TRAV23DV6A0A075B6W5 121 aa12.78□□□□□ -0.36
UBR3-201ENST00000272793 UBE2E1P51965 193 aa12.78□□□□□ -0.36
UBR3-201ENST00000272793 TRBV12-3P01733 135 aa12.78□□□□□ -0.36
UBR3-201ENST00000272793 LAIR2Q6ISS4 152 aa12.78□□□□□ -0.36
UBR3-201ENST00000272793 ZNF492Q9P255 531 aa12.77□□□□□ -0.36
UBR3-201ENST00000272793 MESP1Q9BRJ9 268 aa12.77□□□□□ -0.36
UBR3-201ENST00000272793 MARF1Q9Y4F3 1742 aaKnown RBP12.77□□□□□ -0.37
UBR3-201ENST00000272793 LY6G6FQ5SQ64 297 aa12.77□□□□□ -0.37
UBR3-201ENST00000272793 TRPM3Q9HCF6 1732 aaPredicted RBP12.77□□□□□ -0.37
UBR3-201ENST00000272793 ZNF837Q96EG3 531 aaPredicted RBP12.77□□□□□ -0.37
UBR3-201ENST00000272793 PAPPA2Q9BXP8 1791 aa12.77□□□□□ -0.37
UBR3-201ENST00000272793 TMEM200BQ69YZ2 307 aa12.77□□□□□ -0.37
UBR3-201ENST00000272793 DAZ1Q9NQZ3 744 aaKnown RBP12.77□□□□□ -0.37
UBR3-201ENST00000272793 KIAA1551Q9HCM1 1747 aa12.77□□□□□ -0.37
UBR3-201ENST00000272793 PLXNA4Q9HCM2 1894 aa12.77□□□□□ -0.37
UBR3-201ENST00000272793 A0A087WV48 116 aa12.77□□□□□ -0.37
UBR3-201ENST00000272793 PRSS47A8MTI9 375 aa12.77□□□□□ -0.37
UBR3-201ENST00000272793 NTN3O00634 580 aaPredicted RBP12.77□□□□□ -0.37
UBR3-201ENST00000272793 TREML4Q6UXN2 200 aa12.77□□□□□ -0.37
UBR3-201ENST00000272793 MRPL36Q9P0J6 103 aaKnown RBP12.77□□□□□ -0.37
UBR3-201ENST00000272793 TRAV4A0A0B4J268 109 aa12.76□□□□□ -0.37
UBR3-201ENST00000272793 H3BQ85 93 aa12.76□□□□□ -0.37
UBR3-201ENST00000272793 BTCP35070 178 aa12.76□□□□□ -0.37
UBR3-201ENST00000272793 TMEM213A2RRL7 107 aa12.76□□□□□ -0.37
UBR3-201ENST00000272793 LRCOL1A6NCL2 159 aa12.76□□□□□ -0.37
UBR3-201ENST00000272793 FAM231DQ6ZW35 169 aa12.76□□□□□ -0.37
UBR3-201ENST00000272793 TRBV24-1A0A075B6N3 115 aa12.76□□□□□ -0.37
UBR3-201ENST00000272793 IGLV10-54A0A075B6I4 117 aa12.75□□□□□ -0.37
UBR3-201ENST00000272793 CFHR1Q03591 330 aa12.75□□□□□ -0.37
UBR3-201ENST00000272793 FOXI1Q12951 378 aa12.75□□□□□ -0.37
UBR3-201ENST00000272793 LY75O60449 1722 aa12.75□□□□□ -0.37
UBR3-201ENST00000272793 IGHV1-3A0A0C4DH29 117 aa12.75□□□□□ -0.37
UBR3-201ENST00000272793 J3QQQ9 107 aa12.75□□□□□ -0.37
UBR3-201ENST00000272793 CRYGBP07316 175 aa12.75□□□□□ -0.37
UBR3-201ENST00000272793 HGFACQ04756 655 aa12.75□□□□□ -0.37
UBR3-201ENST00000272793 C10orf55Q5SWW7 151 aa12.75□□□□□ -0.37
UBR3-201ENST00000272793 FANCD2OSQ96PS1 177 aa12.75□□□□□ -0.37
UBR3-201ENST00000272793 Q9H8V8 135 aa12.75□□□□□ -0.37
UBR3-201ENST00000272793 POLR3KQ9Y2Y1 108 aaPredicted RBP12.75□□□□□ -0.37
UBR3-201ENST00000272793 SDHAF1A6NFY7 115 aa12.75□□□□□ -0.37
UBR3-201ENST00000272793 COX8AP10176 69 aa12.75□□□□□ -0.37
UBR3-201ENST00000272793 RPP25LQ8N5L8 163 aaKnown RBP12.75□□□□□ -0.37
UBR3-201ENST00000272793 K7EMI3 77 aa12.74□□□□□ -0.37
UBR3-201ENST00000272793 DSCR9P59020 149 aa12.74□□□□□ -0.37
UBR3-201ENST00000272793 LY6DQ14210 128 aa12.74□□□□□ -0.37
UBR3-201ENST00000272793 LINC00479Q96M42 142 aa12.74□□□□□ -0.37
UBR3-201ENST00000272793 C12orf74Q32Q52 190 aa12.74□□□□□ -0.37
UBR3-201ENST00000272793 C5orf38Q86SI9 138 aa12.74□□□□□ -0.37
UBR3-201ENST00000272793 NOP10Q9NPE3 64 aaKnown RBP12.74□□□□□ -0.37
UBR3-201ENST00000272793 NDUFC2-KCTD14E9PQ53 114 aa12.73□□□□□ -0.37
UBR3-201ENST00000272793 NCR3O14931 201 aa12.73□□□□□ -0.37
UBR3-201ENST00000272793 LYPD1Q8N2G4 141 aa12.73□□□□□ -0.37
UBR3-201ENST00000272793 SLC25A29Q8N8R3 303 aa12.73□□□□□ -0.37
UBR3-201ENST00000272793 CAMK2N2Q96S95 79 aa12.73□□□□□ -0.37
UBR3-201ENST00000272793 HIST2H2BCQ6DN03 193 aa12.73□□□□□ -0.37
UBR3-201ENST00000272793 ALPK3Q96L96 1907 aa12.73□□□□□ -0.37
UBR3-201ENST00000272793 TRBV6-7A0A0A0MS04 114 aa12.73□□□□□ -0.37
UBR3-201ENST00000272793 SH2D6Q7Z4S9 175 aa12.73□□□□□ -0.37
UBR3-201ENST00000272793 TMEM75Q8N9X5 138 aa12.73□□□□□ -0.37
UBR3-201ENST00000272793 TIAF1O95411 115 aa12.73□□□□□ -0.37
UBR3-201ENST00000272793 ZFP36L1Q07352 338 aaKnown RBP12.73□□□□□ -0.37
UBR3-201ENST00000272793 ZNF493Q6ZR52 646 aa12.73□□□□□ -0.37
UBR3-201ENST00000272793 OPRPNQ99935 248 aaPredicted RBP12.73□□□□□ -0.37
UBR3-201ENST00000272793 PTPN13Q12923 2485 aa12.73□□□□□ -0.37
UBR3-201ENST00000272793 MRPL51Q4U2R6 128 aaKnown RBP12.72□□□□□ -0.37
UBR3-201ENST00000272793 LINC01620Q4KN68 170 aa12.72□□□□□ -0.37
UBR3-201ENST00000272793 NPYP01303 97 aa12.72□□□□□ -0.37
UBR3-201ENST00000272793 LTAP01374 205 aa12.72□□□□□ -0.37
UBR3-201ENST00000272793 MRPL35Q9NZE8 188 aaKnown RBP12.72□□□□□ -0.37
UBR3-201ENST00000272793 ADAMTSL1Q8N6G6 1762 aa12.72□□□□□ -0.37
UBR3-201ENST00000272793 F8VRH5 84 aa12.72□□□□□ -0.37
UBR3-201ENST00000272793 WFDC10BQ8IUB3 73 aa12.72□□□□□ -0.37
UBR3-201ENST00000272793 Q8N8P6 123 aa12.72□□□□□ -0.37
UBR3-201ENST00000272793 IGHV4-30-4P0DP06 118 aa12.72□□□□□ -0.37
UBR3-201ENST00000272793 IGHV4-31P0DP07 118 aa12.72□□□□□ -0.37
UBR3-201ENST00000272793 GFI1Q99684 422 aa12.72□□□□□ -0.37
UBR3-201ENST00000272793 CCL25O15444 150 aa12.71□□□□□ -0.37
UBR3-201ENST00000272793 MPZP25189 248 aa12.71□□□□□ -0.37
UBR3-201ENST00000272793 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.71□□□□□ -0.37
UBR3-201ENST00000272793 A0A1B0GTI1 187 aa12.71□□□□□ -0.37
UBR3-201ENST00000272793 IGKV2-29A2NJV5 120 aaPredicted RBP12.71□□□□□ -0.37
UBR3-201ENST00000272793 SP5Q6BEB4 398 aaPredicted RBP12.71□□□□□ -0.37
UBR3-201ENST00000272793 PAPPAQ13219 1627 aa12.71□□□□□ -0.37
UBR3-201ENST00000272793 G3V4G9 280 aa12.71□□□□□ -0.37
UBR3-201ENST00000272793 EFNA4P52798 201 aa12.71□□□□□ -0.37
UBR3-201ENST00000272793 LRP4O75096 1905 aa12.71□□□□□ -0.38
UBR3-201ENST00000272793 TRBV10-2A0A0K0K1G8 114 aa12.71□□□□□ -0.38
UBR3-201ENST00000272793 WIPF3A6NGB9 483 aa12.71□□□□□ -0.38
UBR3-201ENST00000272793 GFRA4Q9GZZ7 299 aa12.71□□□□□ -0.38
UBR3-201ENST00000272793 JMJD7-PLA2G4BH0Y9G9 81 aa12.7□□□□□ -0.38
UBR3-201ENST00000272793 IGHV4-30-2A0A087WSY4 118 aa12.7□□□□□ -0.38
UBR3-201ENST00000272793 LINC01619G3V211 115 aa12.7□□□□□ -0.38
UBR3-201ENST00000272793 MINOS1Q5TGZ0 78 aa12.7□□□□□ -0.38
UBR3-201ENST00000272793 UPK3BQ9BT76 320 aa12.7□□□□□ -0.38
UBR3-201ENST00000272793 MINOS1-NBL1R4GNA1 71 aa12.7□□□□□ -0.38
UBR3-201ENST00000272793 WISP1O95388 367 aa12.7□□□□□ -0.38
UBR3-201ENST00000272793 GPHB5Q86YW7 130 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms