RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ATP6V0E1O15342 81 aa4.49□□□□□ -1.69
SCN1A-209ENST00000635750 CRYGCP07315 174 aa4.49□□□□□ -1.69
SCN1A-209ENST00000635750 WDR83OSQ9Y284 106 aa4.49□□□□□ -1.69
SCN1A-209ENST00000635750 PINLYPA6NC86 204 aa4.49□□□□□ -1.69
SCN1A-209ENST00000635750 E7EQL1 145 aa4.49□□□□□ -1.69
SCN1A-209ENST00000635750 F8W735 103 aaPredicted RBP4.49□□□□□ -1.69
SCN1A-209ENST00000635750 LYZL4Q96KX0 146 aa4.49□□□□□ -1.69
SCN1A-209ENST00000635750 SHANK1Q9Y566 2161 aa4.49□□□□□ -1.69
SCN1A-209ENST00000635750 SMKR1H3BMG3 65 aa4.49□□□□□ -1.69
SCN1A-209ENST00000635750 KIR3DS1Q14943 382 aa4.49□□□□□ -1.69
SCN1A-209ENST00000635750 MRPL23Q16540 153 aaKnown RBP4.49□□□□□ -1.69
SCN1A-209ENST00000635750 WFDC9Q8NEX5 89 aa4.49□□□□□ -1.69
SCN1A-209ENST00000635750 NOP10Q9NPE3 64 aaKnown RBP4.49□□□□□ -1.69
SCN1A-209ENST00000635750 A0A087X0K7 114 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 A0A0J9YY99 117 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 WISP3O95389 354 aaPredicted RBP4.48□□□□□ -1.69
SCN1A-209ENST00000635750 ATP6V0BQ99437 205 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 RSPO3Q9BXY4 272 aaPredicted RBP4.48□□□□□ -1.69
SCN1A-209ENST00000635750 RLFQ13129 1914 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 IGHV3-38A0A0C4DH36 116 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 IGHG2P01859 326 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 LAIR2Q6ISS4 152 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 AMN1Q8IY45 258 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 CD177Q8N6Q3 437 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 AGMATQ9BSE5 352 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 ORMDL1Q9P0S3 153 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 IGLL5B9A064 214 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 SYS1-DBNDD2H3BUS1 97 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 CFPP27918 469 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 ZC2HC1BQ5TFG8 222 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 IGFL4Q6B9Z1 124 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 PAQR4Q8N4S7 273 aaPredicted RBP4.48□□□□□ -1.69
SCN1A-209ENST00000635750 CAMK2N2Q96S95 79 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 SHANK2-AS3Q9BTD1 123 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 IGKV1D-12P01611 117 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 PKDREJQ9NTG1 2253 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 hDV102S1A0JD36 115 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 PROP1O75360 226 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 ELANEP08246 267 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 MORN5Q5VZ52 161 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 CASC2Q6XLA1 102 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 MED12LQ86YW9 2145 aa4.48□□□□□ -1.69
SCN1A-209ENST00000635750 TMEM131Q92545 1883 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 TRAV12-2A0A075B6T6 113 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 C9JQL5 133 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 C14orf177Q52M58 125 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 LYPD2Q6UXB3 125 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 Q6ZS92 163 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 C8orf86Q6ZUL3 223 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 C17orf77Q96MU5 243 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 LY96Q9Y6Y9 160 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 C5orf63A6NC05 138 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 GGNQ86UU5 652 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 GPHB5Q86YW7 130 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 HS3ST6Q96QI5 342 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 VSIRQ9H7M9 311 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 LY6HO94772 140 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 C1QCP02747 245 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 IFITM1P13164 125 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 Q6ZQT7 251 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 MRPL53Q96EL3 112 aaKnown RBP4.47□□□□□ -1.69
SCN1A-209ENST00000635750 C2orf16Q68DN1 1984 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 NRXN2Q9P2S2 1712 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 TINCRA0A1B0GVN0 87 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 FGF6P10767 208 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 NLRC5Q86WI3 1866 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 A0A1B0GX51 115 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 PRSS46E5RG02 174 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 C16orf74Q96GX8 76 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 B9D2Q9BPU9 175 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 KIF26AQ9ULI4 1882 aaPredicted RBP4.47□□□□□ -1.69
SCN1A-209ENST00000635750 HERV-K104P63124 156 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 ADAMTSL5Q6ZMM2 481 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 NDUFA12Q9UI09 145 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 WDR90Q96KV7 1748 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 SDHAF1A6NFY7 115 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 YPEL3P61236 119 aaPredicted RBP4.47□□□□□ -1.69
SCN1A-209ENST00000635750 LINC00114Q6XXX2 140 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 FOXI2Q6ZQN5 318 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 KIR2DL5BQ8NHK3 375 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 CITED1Q99966 193 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 GTSF1LQ9H1H1 148 aa4.47□□□□□ -1.69
SCN1A-209ENST00000635750 IGHV4-4A0A075B6R2 117 aa4.46□□□□□ -1.69
SCN1A-209ENST00000635750 GP9P14770 177 aa4.46□□□□□ -1.69
SCN1A-209ENST00000635750 PIFOQ8TCI5 191 aa4.46□□□□□ -1.69
SCN1A-209ENST00000635750 IGLV2-23P01705 113 aa4.46□□□□□ -1.7
SCN1A-209ENST00000635750 GLRX5Q86SX6 157 aa4.46□□□□□ -1.7
SCN1A-209ENST00000635750 Q8N8P6 123 aa4.46□□□□□ -1.7
SCN1A-209ENST00000635750 VPREB3Q9UKI3 123 aa4.46□□□□□ -1.7
SCN1A-209ENST00000635750 IGHV4-28A0A0C4DH34 117 aa4.46□□□□□ -1.7
SCN1A-209ENST00000635750 SLC25A29Q8N8R3 303 aa4.46□□□□□ -1.7
SCN1A-209ENST00000635750 RNF126Q9BV68 326 aa4.46□□□□□ -1.7
SCN1A-209ENST00000635750 FREM1Q5H8C1 2179 aa4.46□□□□□ -1.7
SCN1A-209ENST00000635750 Q86TA4 180 aa4.46□□□□□ -1.7
SCN1A-209ENST00000635750 BOD1L2Q8IYS8 172 aa4.46□□□□□ -1.7
SCN1A-209ENST00000635750 ANKRD29Q8N6D5 301 aa4.46□□□□□ -1.7
SCN1A-209ENST00000635750 Q8NFD4 153 aa4.46□□□□□ -1.7
SCN1A-209ENST00000635750 PYGO2Q9BRQ0 406 aa4.46□□□□□ -1.7
SCN1A-209ENST00000635750 VWA8A3KMH1 1905 aa4.46□□□□□ -1.7
SCN1A-209ENST00000635750 F6UB75 175 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms