RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 CRYGCP07315 174 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 SRP19P09132 144 aaKnown RBP3.52□□□□□ -1.85
VPS29-212ENST00000621131 OR5G3P0C626 314 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 STAG3L2P0CL84 134 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 STAG3L3P0CL85 134 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 ARL14EPLP0DKL9 152 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 C8orf88P0DMB2 117 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 APELAP0DMC3 54 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 CD99P14209 185 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 CTRB1P17538 263 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 HNF1AP20823 631 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 CD24P25063 80 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 GCHFRP30047 84 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 UBE2L3P68036 154 aaKnown RBP3.52□□□□□ -1.85
VPS29-212ENST00000621131 ZNF726P1Q15940 193 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 ECSCRQ19T08 205 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 C10orf91Q5T1B1 145 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 CTRB2Q6GPI1 263 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 BRD3OSQ6XYD6 125 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 DYNAPQ8N1N2 210 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 RPP25LQ8N5L8 163 aaKnown RBP3.52□□□□□ -1.85
VPS29-212ENST00000621131 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.52□□□□□ -1.85
VPS29-212ENST00000621131 Q8N9W7 124 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 OR1B1Q8NGR6 318 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 OR4F5Q8NH21 305 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 SGMS2Q8NHU3 365 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 EEF1AKMT3Q96AZ1 226 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 RPUSD4Q96CM3 377 aaKnown RBP3.52□□□□□ -1.85
VPS29-212ENST00000621131 TVP23CQ96ET8 276 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 OR4F4Q96R69 305 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 TXN2Q99757 166 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 SSX3Q99909 188 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 TCEAL7Q9BRU2 100 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 NAT8Q9UHE5 227 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 HIGD1AQ9Y241 93 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 PUS1Q9Y606 427 aaKnown RBP eCLIP3.52□□□□□ -1.85
VPS29-212ENST00000621131 RFNGQ9Y644 331 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 ARHGAP32A7KAX9 2087 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 WNK2Q9Y3S1 2297 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 TET2Q6N021 2002 aaPredicted RBP3.51□□□□□ -1.85
VPS29-212ENST00000621131 TRBV7-1A0A0A6YYK4 115 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 IGHV7-81A0A0B4J1V7 117 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 TRAV41A0A0B4J266 112 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 FAM223BA6NKX1 122 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 ZNF727A8MUV8 499 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 E7EUB6 86 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 H3BUA1 57 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 NUPL2O15504 423 aaKnown RBP3.51□□□□□ -1.85
VPS29-212ENST00000621131 RD3LP0DJH9 198 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 ORM2P19652 201 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 S100PP25815 95 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 CDX1P47902 265 aaPredicted RBP3.51□□□□□ -1.85
VPS29-212ENST00000621131 RAB9AP51151 201 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 UBE2G2P60604 165 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 YPEL3P61236 119 aaPredicted RBP3.51□□□□□ -1.85
VPS29-212ENST00000621131 CCL20P78556 96 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 ZNF674Q2M3X9 581 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 LDLRAD2Q5SZI1 272 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 FAM120AOSQ5T036 256 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 SSX7Q7RTT5 188 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 FAM223AQ8IWN6 122 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 C5orf56Q8N8D9 126 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 CYB561D1Q8N8Q1 229 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 OR5AU1Q8NGC0 362 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 OR51G1Q8NGK1 321 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 VN1R17PQ8TDU5 208 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 Q8WTZ3 238 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 LINC00167Q96N53 147 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 ATP6V0BQ99437 205 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 RARRES2Q99969 163 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 SMIM7Q9BQ49 75 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 ALKBH7Q9BT30 221 aaPredicted RBP3.51□□□□□ -1.85
VPS29-212ENST00000621131 FAM103A1Q9BTL3 118 aaKnown RBP3.51□□□□□ -1.85
VPS29-212ENST00000621131 PAXXQ9BUH6 204 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 OR51M1Q9H341 326 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 SMCO4Q9NRQ5 59 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 C21orf62Q9NYP8 219 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 DOK5Q9P104 306 aa3.51□□□□□ -1.85
VPS29-212ENST00000621131 IGLV11-55A0A075B6I3 123 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 IGHV3-21A0A0B4J1V1 117 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 MDFIC2A0A1B0GVS7 189 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 A0A1W2PRE2 83 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 A6NDX4 124 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 H3BQ15 152 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 I3L2K1 104 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 PPP1R2P9O14990 202 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 OR2J3O76001 311 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 MT-ND4LP03901 98 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 ADCYAP1P18509 176 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 SRP14P37108 136 aaKnown RBP3.5□□□□□ -1.85
VPS29-212ENST00000621131 AKR1C3P42330 323 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 PLP1P60201 277 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 SLC35B1P78383 322 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 RPL19P84098 196 aaKnown RBP3.5□□□□□ -1.85
VPS29-212ENST00000621131 ATP5G2Q06055 141 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 BTN1A1Q13410 526 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 LY6EQ16553 131 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 GUCA2BQ16661 112 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 TMEM241Q24JQ0 296 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 TIGITQ495A1 244 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms