RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 SSTP61278 116 aa10.46□□□□□ -0.73
NEK3-205ENST00000610828 UNQ9165/PRO28630Q6UXU0 137 aa10.46□□□□□ -0.73
NEK3-205ENST00000610828 LCNL1Q6ZST4 164 aa10.46□□□□□ -0.73
NEK3-205ENST00000610828 COX8CQ7Z4L0 72 aa10.46□□□□□ -0.73
NEK3-205ENST00000610828 BORCS7Q96B45 105 aa10.46□□□□□ -0.73
NEK3-205ENST00000610828 USMG5Q96IX5 58 aa10.46□□□□□ -0.73
NEK3-205ENST00000610828 U3KQE9 123 aa10.46□□□□□ -0.73
NEK3-205ENST00000610828 ZANQ9Y493 2812 aa10.46□□□□□ -0.74
NEK3-205ENST00000610828 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.46□□□□□ -0.74
NEK3-205ENST00000610828 H3BUA1 57 aa10.46□□□□□ -0.74
NEK3-205ENST00000610828 ZNF124Q15973 351 aa10.46□□□□□ -0.74
NEK3-205ENST00000610828 C8orf86Q6ZUL3 223 aa10.46□□□□□ -0.74
NEK3-205ENST00000610828 NIT1Q86X76 327 aa10.46□□□□□ -0.74
NEK3-205ENST00000610828 NDUFAF3Q9BU61 184 aa10.46□□□□□ -0.74
NEK3-205ENST00000610828 IGHV4-59P01825 116 aa10.45□□□□□ -0.74
NEK3-205ENST00000610828 BMI1P35226 326 aa10.45□□□□□ -0.74
NEK3-205ENST00000610828 DEFB112Q30KQ8 113 aa10.45□□□□□ -0.74
NEK3-205ENST00000610828 RNF223E7ERA6 249 aa10.45□□□□□ -0.74
NEK3-205ENST00000610828 M0QZ24 198 aa10.45□□□□□ -0.74
NEK3-205ENST00000610828 KRTAP10-9P60411 292 aa10.45□□□□□ -0.74
NEK3-205ENST00000610828 LYZL1Q6UWQ5 148 aa10.45□□□□□ -0.74
NEK3-205ENST00000610828 TRAV8-2A0A0B4J237 113 aa10.44□□□□□ -0.74
NEK3-205ENST00000610828 M0R2Z0 102 aa10.44□□□□□ -0.74
NEK3-205ENST00000610828 NDUFA4O00483 81 aa10.44□□□□□ -0.74
NEK3-205ENST00000610828 BRI3O95415 125 aa10.44□□□□□ -0.74
NEK3-205ENST00000610828 OR4X2Q8NGF9 303 aa10.44□□□□□ -0.74
NEK3-205ENST00000610828 PPP1R14DQ9NXH3 145 aa10.44□□□□□ -0.74
NEK3-205ENST00000610828 PTPN13Q12923 2485 aa10.44□□□□□ -0.74
NEK3-205ENST00000610828 A0A1B0GW15 77 aa10.44□□□□□ -0.74
NEK3-205ENST00000610828 RBAKDNA6NC62 111 aa10.44□□□□□ -0.74
NEK3-205ENST00000610828 TMEM95Q3KNT9 176 aa10.44□□□□□ -0.74
NEK3-205ENST00000610828 TDRG1Q3Y452 100 aa10.44□□□□□ -0.74
NEK3-205ENST00000610828 MUC21A0A0G2JKD1 596 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 MUC21A0A140T8X8 626 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 SMAD7O15105 426 aaKnown RBP10.43□□□□□ -0.74
NEK3-205ENST00000610828 IGLV1-40P01703 118 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 ORM1P02763 201 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 C3orf79P0CE67 100 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 MUC21Q5SSG8 566 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 TEX43Q6ZNM6 134 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 IL17RELQ6ZVW7 336 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 GLMPQ8WWB7 406 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 URB1-AS1Q96HZ7 61 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 C16orf92Q96LL3 132 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 KIR2DL5BA0A0G2JN68 375 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 KIR2DL5BA0A0G2JPC4 375 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 A0A1B0GV90 55 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 J3QLI3 93 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 KIR2DL5AQ8N109 375 aa10.43□□□□□ -0.74
NEK3-205ENST00000610828 A0A0G2JLM5 398 aa10.42□□□□□ -0.74
NEK3-205ENST00000610828 TMEM213A2RRL7 107 aa10.42□□□□□ -0.74
NEK3-205ENST00000610828 FABP5P3A8MUU1 101 aa10.42□□□□□ -0.74
NEK3-205ENST00000610828 TMEM78Q5T7P6 136 aa10.42□□□□□ -0.74
NEK3-205ENST00000610828 AGPAT4-IT1Q9H0P7 198 aa10.42□□□□□ -0.74
NEK3-205ENST00000610828 PAM16Q9Y3D7 125 aa10.42□□□□□ -0.74
NEK3-205ENST00000610828 PMCHL1Q16048 86 aa10.41□□□□□ -0.74
NEK3-205ENST00000610828 Q8N976 141 aa10.41□□□□□ -0.74
NEK3-205ENST00000610828 MRPL53Q96EL3 112 aaKnown RBP10.41□□□□□ -0.74
NEK3-205ENST00000610828 VAMP8Q9BV40 100 aa10.41□□□□□ -0.74
NEK3-205ENST00000610828 ABCA12Q86UK0 2595 aa10.41□□□□□ -0.74
NEK3-205ENST00000610828 FAM181BA6NEQ2 426 aa10.41□□□□□ -0.74
NEK3-205ENST00000610828 RPS20P60866 119 aaKnown RBP10.41□□□□□ -0.74
NEK3-205ENST00000610828 CFHR3Q02985 330 aa10.41□□□□□ -0.74
NEK3-205ENST00000610828 LOXL1Q08397 574 aaPredicted RBP10.41□□□□□ -0.74
NEK3-205ENST00000610828 FER1L6-AS1Q8NA97 138 aa10.41□□□□□ -0.74
NEK3-205ENST00000610828 GATD1Q8NB37 220 aa10.41□□□□□ -0.74
NEK3-205ENST00000610828 NPFFR1Q9GZQ6 430 aa10.41□□□□□ -0.74
NEK3-205ENST00000610828 CSN3P07498 182 aa10.4□□□□□ -0.74
NEK3-205ENST00000610828 LINC00614P0C842 121 aa10.4□□□□□ -0.74
NEK3-205ENST00000610828 ZNF138P52744 262 aa10.4□□□□□ -0.74
NEK3-205ENST00000610828 C21orf62-AS1Q17RA5 79 aa10.4□□□□□ -0.74
NEK3-205ENST00000610828 A6NJY4 79 aa10.4□□□□□ -0.74
NEK3-205ENST00000610828 RPL11P62913 178 aaKnown RBP10.4□□□□□ -0.74
NEK3-205ENST00000610828 ZNF493Q6ZR52 646 aa10.4□□□□□ -0.74
NEK3-205ENST00000610828 CHCHD1Q96BP2 118 aaKnown RBP10.4□□□□□ -0.74
NEK3-205ENST00000610828 NAV2Q8IVL1 2488 aa10.4□□□□□ -0.75
NEK3-205ENST00000610828 EREGO14944 169 aa10.39□□□□□ -0.75
NEK3-205ENST00000610828 TWIST1Q15672 202 aa10.39□□□□□ -0.75
NEK3-205ENST00000610828 DEFB113Q30KQ7 82 aa10.39□□□□□ -0.75
NEK3-205ENST00000610828 Q5PR19 223 aa10.39□□□□□ -0.75
NEK3-205ENST00000610828 C9orf139Q6ZV77 190 aa10.39□□□□□ -0.75
NEK3-205ENST00000610828 NBPF19A0A087WUL8 3843 aa10.39□□□□□ -0.75
NEK3-205ENST00000610828 IGLC6P0CF74 106 aa10.39□□□□□ -0.75
NEK3-205ENST00000610828 IGHV4-31P0DP07 118 aa10.39□□□□□ -0.75
NEK3-205ENST00000610828 CTRLP40313 264 aa10.39□□□□□ -0.75
NEK3-205ENST00000610828 EBLN2Q6P2I7 272 aa10.39□□□□□ -0.75
NEK3-205ENST00000610828 ZNF575Q86XF7 245 aa10.39□□□□□ -0.75
NEK3-205ENST00000610828 ZNF738Q8NE65 137 aa10.39□□□□□ -0.75
NEK3-205ENST00000610828 CLEC5AQ9NY25 188 aa10.39□□□□□ -0.75
NEK3-205ENST00000610828 IGHV1-24A0A0C4DH33 117 aa10.38□□□□□ -0.75
NEK3-205ENST00000610828 SRSF2Q01130 221 aaKnown RBP10.38□□□□□ -0.75
NEK3-205ENST00000610828 TM4SF20Q53R12 229 aa10.38□□□□□ -0.75
NEK3-205ENST00000610828 C9orf47Q6ZRZ4 202 aa10.38□□□□□ -0.75
NEK3-205ENST00000610828 GPHB5Q86YW7 130 aa10.38□□□□□ -0.75
NEK3-205ENST00000610828 AMN1Q8IY45 258 aa10.38□□□□□ -0.75
NEK3-205ENST00000610828 C20orf173Q96LM9 149 aa10.38□□□□□ -0.75
NEK3-205ENST00000610828 IGKV3-7A0A075B6H7 116 aa10.38□□□□□ -0.75
NEK3-205ENST00000610828 LINC01559Q495D7 138 aa10.38□□□□□ -0.75
NEK3-205ENST00000610828 C10orf99Q6UWK7 81 aa10.38□□□□□ -0.75
NEK3-205ENST00000610828 C2orf88Q9BSF0 95 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms