RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 Q6ZQT7 251 aa8.67□□□□□ -1.02
CTSA-210ENST00000606000 SCGB1C1Q8TD33 95 aa8.67□□□□□ -1.02
CTSA-210ENST00000606000 TMEM263Q8WUH6 116 aaKnown RBP8.67□□□□□ -1.02
CTSA-210ENST00000606000 RNF141Q8WVD5 230 aa8.67□□□□□ -1.02
CTSA-210ENST00000606000 FAM19A4Q96LR4 140 aa8.67□□□□□ -1.02
CTSA-210ENST00000606000 ODF3Q96PU9 254 aa8.67□□□□□ -1.02
CTSA-210ENST00000606000 VGLL1Q99990 258 aa8.67□□□□□ -1.02
CTSA-210ENST00000606000 NOP10Q9NPE3 64 aaKnown RBP8.67□□□□□ -1.02
CTSA-210ENST00000606000 RAB2AP61019 212 aa8.66□□□□□ -1.02
CTSA-210ENST00000606000 UBE2L3P68036 154 aaKnown RBP8.66□□□□□ -1.02
CTSA-210ENST00000606000 Q8TAT8 98 aa8.66□□□□□ -1.02
CTSA-210ENST00000606000 ASB13Q8WXK3 278 aa8.66□□□□□ -1.02
CTSA-210ENST00000606000 C20orf144Q9BQM9 153 aa8.66□□□□□ -1.02
CTSA-210ENST00000606000 AAMDCQ9H7C9 122 aa8.66□□□□□ -1.02
CTSA-210ENST00000606000 PRELID1Q9Y255 219 aa8.66□□□□□ -1.02
CTSA-210ENST00000606000 C7orf71A4D174 169 aa8.65□□□□□ -1.02
CTSA-210ENST00000606000 KLLNB2CW77 178 aa8.65□□□□□ -1.02
CTSA-210ENST00000606000 HMGB3O15347 200 aaKnown RBP8.65□□□□□ -1.02
CTSA-210ENST00000606000 P0DMU3 169 aa8.65□□□□□ -1.02
CTSA-210ENST00000606000 FAM231AP0DMU4 169 aa8.65□□□□□ -1.02
CTSA-210ENST00000606000 FAM231CP0DMU5 169 aa8.65□□□□□ -1.02
CTSA-210ENST00000606000 POM121L12Q8N7R1 296 aa8.65□□□□□ -1.02
CTSA-210ENST00000606000 Q9H3A6 140 aa8.65□□□□□ -1.02
CTSA-210ENST00000606000 TIMM8BQ9Y5J9 83 aaPredicted RBP8.65□□□□□ -1.02
CTSA-210ENST00000606000 IGLV2-18A0A075B6J9 118 aa8.64□□□□□ -1.03
CTSA-210ENST00000606000 F5H768 121 aa8.64□□□□□ -1.03
CTSA-210ENST00000606000 M0R2N4 97 aa8.64□□□□□ -1.03
CTSA-210ENST00000606000 RNASE4P34096 147 aaKnown RBP8.64□□□□□ -1.03
CTSA-210ENST00000606000 RANP62826 216 aaKnown RBP8.64□□□□□ -1.03
CTSA-210ENST00000606000 KHDC3LQ587J8 217 aa8.64□□□□□ -1.03
CTSA-210ENST00000606000 C9orf47Q6ZRZ4 202 aa8.64□□□□□ -1.03
CTSA-210ENST00000606000 ZFAND2AQ8N6M9 145 aa8.64□□□□□ -1.03
CTSA-210ENST00000606000 FAM210BQ96KR6 192 aa8.64□□□□□ -1.03
CTSA-210ENST00000606000 DNAH10Q8IVF4 4471 aa8.64□□□□□ -1.03
CTSA-210ENST00000606000 FRAS1Q86XX4 4008 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 GAGE12BA1L429 117 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 RNF222A6NCQ9 220 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 ARPC5O15511 151 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 ZNF324O75467 553 aaPredicted RBP8.63□□□□□ -1.03
CTSA-210ENST00000606000 GAGE7O76087 117 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 SLC25A5P05141 298 aaKnown RBP8.63□□□□□ -1.03
CTSA-210ENST00000606000 ATP5G1P05496 136 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 GAGE12FP0CL80 117 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 GAGE12GP0CL81 117 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 GAGE12IP0CL82 117 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 ATP5G3P48201 142 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 ZNF493Q6ZR52 646 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 UBE2DNLQ8IWF7 75 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 CCDC28AQ8IWP9 274 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 LINC00612Q8N6U2 182 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 HSD17B11Q8NBQ5 300 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 INO80EQ8NBZ0 244 aaPredicted RBP8.63□□□□□ -1.03
CTSA-210ENST00000606000 ST6GAL2Q96JF0 529 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 LINC00477Q96M19 166 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 AQP10Q96PS8 301 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 ZNF492Q9P255 531 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 TP53TG3Q9ULZ0 132 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 TNFSF18Q9UNG2 199 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 DNAH6Q9C0G6 4158 aa8.63□□□□□ -1.03
CTSA-210ENST00000606000 NACAE9PAV3 2078 aa8.62□□□□□ -1.03
CTSA-210ENST00000606000 CBY3A6NI87 242 aa8.62□□□□□ -1.03
CTSA-210ENST00000606000 CRISP2P16562 243 aa8.62□□□□□ -1.03
CTSA-210ENST00000606000 M6PRP20645 277 aa8.62□□□□□ -1.03
CTSA-210ENST00000606000 TMEM78Q5T7P6 136 aa8.62□□□□□ -1.03
CTSA-210ENST00000606000 C11orf72Q8NBR9 251 aa8.62□□□□□ -1.03
CTSA-210ENST00000606000 OR11H4Q8NGC9 324 aa8.62□□□□□ -1.03
CTSA-210ENST00000606000 PYGO2Q9BRQ0 406 aa8.62□□□□□ -1.03
CTSA-210ENST00000606000 SH3BGRL3Q9H299 93 aa8.62□□□□□ -1.03
CTSA-210ENST00000606000 RPH3ALQ9UNE2 315 aa8.62□□□□□ -1.03
CTSA-210ENST00000606000 SNURFLB1AK76 121 aa8.61□□□□□ -1.03
CTSA-210ENST00000606000 NUDT3O95989 172 aa8.61□□□□□ -1.03
CTSA-210ENST00000606000 GPX1P07203 203 aa8.61□□□□□ -1.03
CTSA-210ENST00000606000 HOXA5P20719 270 aa8.61□□□□□ -1.03
CTSA-210ENST00000606000 ATP6V0CP27449 155 aa8.61□□□□□ -1.03
CTSA-210ENST00000606000 ZNF138P52744 262 aa8.61□□□□□ -1.03
CTSA-210ENST00000606000 TAS2R45P59539 299 aa8.61□□□□□ -1.03
CTSA-210ENST00000606000 ACOT6Q3I5F7 207 aaPredicted RBP8.61□□□□□ -1.03
CTSA-210ENST00000606000 Q6ZTI0 123 aa8.61□□□□□ -1.03
CTSA-210ENST00000606000 OR10G4Q8NGN3 311 aa8.61□□□□□ -1.03
CTSA-210ENST00000606000 OR10G9Q8NGN4 311 aa8.61□□□□□ -1.03
CTSA-210ENST00000606000 OR10G7Q8NGN6 311 aa8.61□□□□□ -1.03
CTSA-210ENST00000606000 HYLS1Q96M11 299 aa8.61□□□□□ -1.03
CTSA-210ENST00000606000 GSN-AS1Q9NRJ2 163 aa8.61□□□□□ -1.03
CTSA-210ENST00000606000 DIRC3C9JPN6 131 aa8.6□□□□□ -1.03
CTSA-210ENST00000606000 GNG5P63218 68 aa8.6□□□□□ -1.03
CTSA-210ENST00000606000 AKAP14Q86UN6 197 aa8.6□□□□□ -1.03
CTSA-210ENST00000606000 C15orf53Q8NAA6 179 aa8.6□□□□□ -1.03
CTSA-210ENST00000606000 TMPRSS5Q9H3S3 457 aa8.6□□□□□ -1.03
CTSA-210ENST00000606000 KLF12Q9Y4X4 402 aa8.6□□□□□ -1.03
CTSA-210ENST00000606000 A0A0J9YY99 117 aa8.59□□□□□ -1.03
CTSA-210ENST00000606000 A0A1W2PPV4 95 aa8.59□□□□□ -1.03
CTSA-210ENST00000606000 PGPA6NDG6 321 aa8.59□□□□□ -1.03
CTSA-210ENST00000606000 ARL14EPLP0DKL9 152 aa8.59□□□□□ -1.03
CTSA-210ENST00000606000 CSN1S1P47710 185 aa8.59□□□□□ -1.03
CTSA-210ENST00000606000 CDC34P49427 236 aaPredicted RBP8.59□□□□□ -1.03
CTSA-210ENST00000606000 OR5I1Q13606 314 aa8.59□□□□□ -1.03
CTSA-210ENST00000606000 ZNF266Q14584 549 aa8.59□□□□□ -1.03
CTSA-210ENST00000606000 MUC21Q5SSG8 566 aa8.59□□□□□ -1.03
CTSA-210ENST00000606000 RPL7L1Q6DKI1 246 aaKnown RBP8.59□□□□□ -1.03
CTSA-210ENST00000606000 SSX7Q7RTT5 188 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms