RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 INSP01308 110 aa10.06□□□□□ -0.8
RNF40-212ENST00000602784 IGKV2D-40P01614 121 aaPredicted RBP10.06□□□□□ -0.8
RNF40-212ENST00000602784 H2AFB1P0C5Y9 115 aa10.06□□□□□ -0.8
RNF40-212ENST00000602784 MIFP14174 115 aa10.06□□□□□ -0.8
RNF40-212ENST00000602784 LEPP41159 167 aa10.06□□□□□ -0.8
RNF40-212ENST00000602784 SULT1A2P50226 295 aa10.06□□□□□ -0.8
RNF40-212ENST00000602784 FGF8P55075 233 aaPredicted RBP10.06□□□□□ -0.8
RNF40-212ENST00000602784 ERCC8Q13216 396 aa10.06□□□□□ -0.8
RNF40-212ENST00000602784 TMEM78Q5T7P6 136 aa10.06□□□□□ -0.8
RNF40-212ENST00000602784 IQCF2Q8IXL9 164 aa10.06□□□□□ -0.8
RNF40-212ENST00000602784 C5orf17Q8NAS9 161 aa10.06□□□□□ -0.8
RNF40-212ENST00000602784 FAM19A4Q96LR4 140 aa10.06□□□□□ -0.8
RNF40-212ENST00000602784 VGLL1Q99990 258 aa10.06□□□□□ -0.8
RNF40-212ENST00000602784 C11orf68Q9H3H3 251 aaKnown RBP10.06□□□□□ -0.8
RNF40-212ENST00000602784 TMPRSS5Q9H3S3 457 aa10.06□□□□□ -0.8
RNF40-212ENST00000602784 ARL2-SNX15V9GYD0 113 aa10.06□□□□□ -0.8
RNF40-212ENST00000602784 X6R8D5 127 aa10.06□□□□□ -0.8
RNF40-212ENST00000602784 ZNF138P52744 262 aa10.05□□□□□ -0.8
RNF40-212ENST00000602784 NKX2-5P52952 324 aaPredicted RBP10.05□□□□□ -0.8
RNF40-212ENST00000602784 SUMO1P63165 101 aaKnown RBP10.05□□□□□ -0.8
RNF40-212ENST00000602784 C1orf158Q8N1D5 194 aa10.05□□□□□ -0.8
RNF40-212ENST00000602784 TMEM256Q8N2U0 113 aa10.05□□□□□ -0.8
RNF40-212ENST00000602784 C20orf144Q9BQM9 153 aa10.05□□□□□ -0.8
RNF40-212ENST00000602784 ZNF492Q9P255 531 aa10.05□□□□□ -0.8
RNF40-212ENST00000602784 LENEPQ9Y5L5 61 aa10.05□□□□□ -0.8
RNF40-212ENST00000602784 A0A0J9YWU9 116 aa10.04□□□□□ -0.8
RNF40-212ENST00000602784 GGTLC3B5MD39 225 aa10.04□□□□□ -0.8
RNF40-212ENST00000602784 CRISP2P16562 243 aa10.04□□□□□ -0.8
RNF40-212ENST00000602784 Q8NAQ8 132 aa10.04□□□□□ -0.8
RNF40-212ENST00000602784 EPDR1Q9UM22 224 aa10.04□□□□□ -0.8
RNF40-212ENST00000602784 YTHDF2Q9Y5A9 579 aaKnown RBP10.04□□□□□ -0.8
RNF40-212ENST00000602784 TRAV12-2A0A075B6T6 113 aa10.03□□□□□ -0.8
RNF40-212ENST00000602784 FAM74A7A6NL05 159 aa10.03□□□□□ -0.8
RNF40-212ENST00000602784 KLLNB2CW77 178 aa10.03□□□□□ -0.8
RNF40-212ENST00000602784 TCRAP04437 139 aa10.03□□□□□ -0.8
RNF40-212ENST00000602784 PPT1P50897 306 aa10.03□□□□□ -0.8
RNF40-212ENST00000602784 GOLT1AQ6ZVE7 132 aa10.03□□□□□ -0.8
RNF40-212ENST00000602784 IL17DQ8TAD2 202 aa10.03□□□□□ -0.8
RNF40-212ENST00000602784 TCEAL7Q9BRU2 100 aa10.03□□□□□ -0.8
RNF40-212ENST00000602784 TMEM208Q9BTX3 173 aa10.03□□□□□ -0.8
RNF40-212ENST00000602784 IGHV4-28A0A0C4DH34 117 aa10.02□□□□□ -0.81
RNF40-212ENST00000602784 FBLL1A6NHQ2 334 aaKnown RBP10.02□□□□□ -0.81
RNF40-212ENST00000602784 TEX46H3BTG2 121 aa10.02□□□□□ -0.81
RNF40-212ENST00000602784 K7EQM0 130 aa10.02□□□□□ -0.81
RNF40-212ENST00000602784 HBE1P02100 147 aa10.02□□□□□ -0.81
RNF40-212ENST00000602784 RBMY1A1P0DJD3 496 aaKnown RBP10.02□□□□□ -0.81
RNF40-212ENST00000602784 RBMY1CP0DJD4 496 aa10.02□□□□□ -0.81
RNF40-212ENST00000602784 UBE2G2P60604 165 aa10.02□□□□□ -0.81
RNF40-212ENST00000602784 RBMY1FQ15415 496 aaKnown RBP10.02□□□□□ -0.81
RNF40-212ENST00000602784 GFI1BQ5VTD9 330 aa10.02□□□□□ -0.81
RNF40-212ENST00000602784 CCDC28AQ8IWP9 274 aa10.02□□□□□ -0.81
RNF40-212ENST00000602784 ZFAND2AQ8N6M9 145 aa10.02□□□□□ -0.81
RNF40-212ENST00000602784 BOLA1Q9Y3E2 137 aa10.02□□□□□ -0.81
RNF40-212ENST00000602784 IGHV3OR16-12A0A075B7B8 117 aa10.01□□□□□ -0.81
RNF40-212ENST00000602784 TMEM189A5PLL7 270 aa10.01□□□□□ -0.81
RNF40-212ENST00000602784 H7BYZ3 331 aa10.01□□□□□ -0.81
RNF40-212ENST00000602784 IFNA7P01567 189 aa10.01□□□□□ -0.81
RNF40-212ENST00000602784 GNG5P63218 68 aa10.01□□□□□ -0.81
RNF40-212ENST00000602784 PMS2P11Q13670 270 aa10.01□□□□□ -0.81
RNF40-212ENST00000602784 KIR3DS1Q14943 382 aa10.01□□□□□ -0.81
RNF40-212ENST00000602784 CYB561D1Q8N8Q1 229 aa10.01□□□□□ -0.81
RNF40-212ENST00000602784 MUC7Q8TAX7 377 aa10.01□□□□□ -0.81
RNF40-212ENST00000602784 HIST1H2BAQ96A08 127 aa10.01□□□□□ -0.81
RNF40-212ENST00000602784 ATG101Q9BSB4 218 aa10.01□□□□□ -0.81
RNF40-212ENST00000602784 C7orf71A4D174 169 aa10□□□□□ -0.81
RNF40-212ENST00000602784 GPX1P07203 203 aa10□□□□□ -0.81
RNF40-212ENST00000602784 TAS2R60P59551 318 aa10□□□□□ -0.81
RNF40-212ENST00000602784 RRN3P1Q2M238 152 aa10□□□□□ -0.81
RNF40-212ENST00000602784 CST9LP1Q5W188 147 aa10□□□□□ -0.81
RNF40-212ENST00000602784 Q8TAT8 98 aa10□□□□□ -0.81
RNF40-212ENST00000602784 LINC01587Q99440 93 aa10□□□□□ -0.81
RNF40-212ENST00000602784 RPH3ALQ9UNE2 315 aa10□□□□□ -0.81
RNF40-212ENST00000602784 TRAV12-3A0A0B4J271 114 aa9.99□□□□□ -0.81
RNF40-212ENST00000602784 F6UZH7 168 aa9.99□□□□□ -0.81
RNF40-212ENST00000602784 C3orf84H3BNL1 204 aa9.99□□□□□ -0.81
RNF40-212ENST00000602784 PAGE4O60829 102 aa9.99□□□□□ -0.81
RNF40-212ENST00000602784 ZNF324O75467 553 aaPredicted RBP9.99□□□□□ -0.81
RNF40-212ENST00000602784 RNASE4P34096 147 aaKnown RBP9.99□□□□□ -0.81
RNF40-212ENST00000602784 ALKAL2Q6UX46 152 aa9.99□□□□□ -0.81
RNF40-212ENST00000602784 TMEM75Q8N9X5 138 aa9.99□□□□□ -0.81
RNF40-212ENST00000602784 PYGO2Q9BRQ0 406 aa9.99□□□□□ -0.81
RNF40-212ENST00000602784 NIPSNAP3BQ9BS92 247 aa9.99□□□□□ -0.81
RNF40-212ENST00000602784 MANBALQ9NQG1 85 aa9.99□□□□□ -0.81
RNF40-212ENST00000602784 TRAV8-1A0A0A6YYK1 113 aa9.98□□□□□ -0.81
RNF40-212ENST00000602784 LOC102723971A0A1B0GUV8 181 aa9.98□□□□□ -0.81
RNF40-212ENST00000602784 A0A1B0GV50 99 aa9.98□□□□□ -0.81
RNF40-212ENST00000602784 DEFB4AO15263 64 aa9.98□□□□□ -0.81
RNF40-212ENST00000602784 IGLV2-11P01706 119 aa9.98□□□□□ -0.81
RNF40-212ENST00000602784 BLOC1S1P78537 153 aa9.98□□□□□ -0.81
RNF40-212ENST00000602784 CCL20P78556 96 aa9.98□□□□□ -0.81
RNF40-212ENST00000602784 ZNF493Q6ZR52 646 aa9.98□□□□□ -0.81
RNF40-212ENST00000602784 LINC00467Q9BRT7 94 aa9.98□□□□□ -0.81
RNF40-212ENST00000602784 KLF12Q9Y4X4 402 aa9.98□□□□□ -0.81
RNF40-212ENST00000602784 ZNF705GA8MUZ8 300 aaPredicted RBP9.97□□□□□ -0.81
RNF40-212ENST00000602784 J3KRW8 73 aa9.97□□□□□ -0.81
RNF40-212ENST00000602784 PEX7O00628 323 aa9.97□□□□□ -0.81
RNF40-212ENST00000602784 FLI1Q01543 452 aaPredicted RBP9.97□□□□□ -0.81
RNF40-212ENST00000602784 BTN1A1Q13410 526 aa9.97□□□□□ -0.81
RNF40-212ENST00000602784 SAPCD1Q5SSQ6 148 aa9.97□□□□□ -0.81
RNF40-212ENST00000602784 C11orf45Q8TAV5 145 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms